Protein–RNA interactions for Protein: Q9DCN7

Rnft1, E3 ubiquitin-protein ligase RNFT1, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1Q9DCN7 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.88□□□□□ -1.79
Rnft1Q9DCN7 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Rnft1Q9DCN7 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Gm14421-201ENSMUST00000121755 1958 ntBASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Gm4736-201ENSMUST00000100870 380 ntBASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Gm15215-201ENSMUST00000117773 489 ntBASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Gm11490-201ENSMUST00000118128 272 ntBASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Gm24909-201ENSMUST00000157290 280 ntBASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Gm23198-201ENSMUST00000158811 91 ntBASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Gm26622-201ENSMUST00000180520 298 ntBASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Gm4842-201ENSMUST00000183237 835 ntBASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Mir6355-201ENSMUST00000183687 106 ntBASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Mir6537-201ENSMUST00000184150 110 ntBASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Gm27286-201ENSMUST00000184934 179 ntBASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Gm6802-202ENSMUST00000186566 126 ntBASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Gm29350-201ENSMUST00000189141 541 ntBASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Gm29192-201ENSMUST00000190942 377 ntBASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Gm37167-201ENSMUST00000194946 396 ntBASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Gm6112-201ENSMUST00000208037 629 ntBASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 AC164883.9-201ENSMUST00000228042 399 ntBASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 mt-Ti-201ENSMUST00000082393 69 ntBASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Snora23-201ENSMUST00000082517 184 ntBASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Gm23721-201ENSMUST00000083005 107 ntBASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Gm23645-201ENSMUST00000083228 108 ntBASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Mir452-201ENSMUST00000093629 85 ntBASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Gm43326-201ENSMUST00000198459 1638 ntBASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Rnft1Q9DCN7 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Rnft1Q9DCN7 CT009510.2-203ENSMUST00000226704 2136 ntBASIC3.86□□□□□ -1.79
Rnft1Q9DCN7 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Rnft1Q9DCN7 Gm37626-201ENSMUST00000194332 4563 ntBASIC3.86□□□□□ -1.79
Rnft1Q9DCN7 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.86□□□□□ -1.79
Rnft1Q9DCN7 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.86□□□□□ -1.79
Rnft1Q9DCN7 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Rnft1Q9DCN7 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Rnft1Q9DCN7 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC3.86□□□□□ -1.79
Rnft1Q9DCN7 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Rnft1Q9DCN7 Gm26273-201ENSMUST00000104180 131 ntBASIC3.86□□□□□ -1.79
Rnft1Q9DCN7 Gm11923-201ENSMUST00000118135 508 ntBASIC3.86□□□□□ -1.79
Rnft1Q9DCN7 Gm12237-201ENSMUST00000120158 470 ntBASIC3.86□□□□□ -1.79
Rnft1Q9DCN7 Gm12155-201ENSMUST00000121267 160 ntBASIC3.86□□□□□ -1.79
Rnft1Q9DCN7 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC3.86□□□□□ -1.79
Rnft1Q9DCN7 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC3.86□□□□□ -1.79
Rnft1Q9DCN7 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.86□□□□□ -1.79
Rnft1Q9DCN7 Gm25341-201ENSMUST00000157461 268 ntBASIC3.86□□□□□ -1.79
Rnft1Q9DCN7 Gm22726-201ENSMUST00000158089 179 ntBASIC3.86□□□□□ -1.79
Rnft1Q9DCN7 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Rnft1Q9DCN7 Gm20698-201ENSMUST00000175657 233 ntBASIC3.86□□□□□ -1.79
Rnft1Q9DCN7 Mup-ps11-201ENSMUST00000178040 545 ntBASIC3.86□□□□□ -1.79
Rnft1Q9DCN7 Mup-ps3-201ENSMUST00000178315 545 ntBASIC3.86□□□□□ -1.79
Rnft1Q9DCN7 Mir6391-201ENSMUST00000184391 104 ntBASIC3.86□□□□□ -1.79
Rnft1Q9DCN7 Gm27733-201ENSMUST00000184803 68 ntBASIC3.86□□□□□ -1.79
Rnft1Q9DCN7 AC174780.1-201ENSMUST00000199415 1107 ntBASIC3.86□□□□□ -1.79
Rnft1Q9DCN7 Mir691-201ENSMUST00000199719 78 ntBASIC3.86□□□□□ -1.79
Rnft1Q9DCN7 Gm45005-201ENSMUST00000206640 157 ntBASIC3.86□□□□□ -1.79
Rnft1Q9DCN7 Gm44583-201ENSMUST00000207478 281 ntBASIC3.86□□□□□ -1.79
Rnft1Q9DCN7 AC154603.1-201ENSMUST00000224355 313 ntBASIC3.86□□□□□ -1.79
Rnft1Q9DCN7 AC154738.5-201ENSMUST00000227397 310 ntBASIC3.86□□□□□ -1.79
Rnft1Q9DCN7 Snord14e-201ENSMUST00000082857 90 ntBASIC3.86□□□□□ -1.79
Rnft1Q9DCN7 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Rnft1Q9DCN7 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
Rnft1Q9DCN7 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Rnft1Q9DCN7 AC133079.1-201ENSMUST00000220943 1881 ntBASIC3.86□□□□□ -1.79
Rnft1Q9DCN7 Gm8995-201ENSMUST00000184842 7280 ntBASIC3.85□□□□□ -1.79
Rnft1Q9DCN7 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Rnft1Q9DCN7 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Rnft1Q9DCN7 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Rnft1Q9DCN7 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Rnft1Q9DCN7 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Rnft1Q9DCN7 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Rnft1Q9DCN7 Gm2066-201ENSMUST00000118046 389 ntBASIC3.85□□□□□ -1.79
Rnft1Q9DCN7 Gm8217-201ENSMUST00000119136 465 ntBASIC3.85□□□□□ -1.79
Rnft1Q9DCN7 Gm14792-201ENSMUST00000119725 258 ntBASIC3.85□□□□□ -1.79
Rnft1Q9DCN7 Gm14841-201ENSMUST00000121067 758 ntBASIC3.85□□□□□ -1.79
Rnft1Q9DCN7 Gm14473-201ENSMUST00000122269 557 ntBASIC3.85□□□□□ -1.79
Rnft1Q9DCN7 Gm22482-201ENSMUST00000122563 359 ntBASIC3.85□□□□□ -1.79
Rnft1Q9DCN7 Gm22988-201ENSMUST00000122759 144 ntBASIC3.85□□□□□ -1.79
Rnft1Q9DCN7 Gm23905-201ENSMUST00000157568 109 ntBASIC3.85□□□□□ -1.79
Rnft1Q9DCN7 Gm24858-201ENSMUST00000158058 323 ntBASIC3.85□□□□□ -1.79
Rnft1Q9DCN7 Gm26036-201ENSMUST00000158149 144 ntBASIC3.85□□□□□ -1.79
Rnft1Q9DCN7 Gm25605-201ENSMUST00000158364 124 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 146.6 ms