Protein–RNA interactions for Protein: Q9CWY9

Rpain, RPA-interacting protein, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpainQ9CWY9 Gm29774-201ENSMUST00000219270 436 ntBASIC4.3□□□□□ -1.72
RpainQ9CWY9 AC159203.2-201ENSMUST00000221326 193 ntBASIC4.3□□□□□ -1.72
RpainQ9CWY9 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.3□□□□□ -1.72
RpainQ9CWY9 AC154241.1-201ENSMUST00000223952 356 ntBASIC4.3□□□□□ -1.72
RpainQ9CWY9 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
RpainQ9CWY9 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
RpainQ9CWY9 Gm23055-201ENSMUST00000082805 94 ntBASIC4.3□□□□□ -1.72
RpainQ9CWY9 Mir26a-2-201ENSMUST00000083496 84 ntBASIC4.3□□□□□ -1.72
RpainQ9CWY9 Mir383-201ENSMUST00000083523 70 ntBASIC4.3□□□□□ -1.72
RpainQ9CWY9 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RpainQ9CWY9 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
RpainQ9CWY9 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
RpainQ9CWY9 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
RpainQ9CWY9 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
RpainQ9CWY9 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
RpainQ9CWY9 Gm15773-201ENSMUST00000118665 1448 ntBASIC4.29□□□□□ -1.72
RpainQ9CWY9 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC4.29□□□□□ -1.72
RpainQ9CWY9 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
RpainQ9CWY9 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
RpainQ9CWY9 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
RpainQ9CWY9 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RpainQ9CWY9 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
RpainQ9CWY9 Gm23481-201ENSMUST00000104173 131 ntBASIC4.29□□□□□ -1.72
RpainQ9CWY9 Gm14977-201ENSMUST00000121626 812 ntBASIC4.29□□□□□ -1.72
RpainQ9CWY9 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC4.29□□□□□ -1.72
RpainQ9CWY9 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RpainQ9CWY9 Gm23350-201ENSMUST00000158429 103 ntBASIC4.29□□□□□ -1.72
RpainQ9CWY9 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC4.29□□□□□ -1.72
RpainQ9CWY9 Gm37128-201ENSMUST00000192599 232 ntBASIC4.29□□□□□ -1.72
RpainQ9CWY9 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC4.29□□□□□ -1.72
RpainQ9CWY9 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC4.29□□□□□ -1.72
RpainQ9CWY9 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RpainQ9CWY9 Gm7041-201ENSMUST00000201227 524 ntBASIC4.29□□□□□ -1.72
RpainQ9CWY9 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC4.29□□□□□ -1.72
RpainQ9CWY9 Gm44016-201ENSMUST00000203463 164 ntBASIC4.29□□□□□ -1.72
RpainQ9CWY9 Gm5876-201ENSMUST00000203735 243 ntBASIC4.29□□□□□ -1.72
RpainQ9CWY9 Gm44059-201ENSMUST00000204048 351 ntBASIC4.29□□□□□ -1.72
RpainQ9CWY9 Gm44703-201ENSMUST00000205724 248 ntBASIC4.29□□□□□ -1.72
RpainQ9CWY9 Gm44650-201ENSMUST00000206929 194 ntBASIC4.29□□□□□ -1.72
RpainQ9CWY9 Gm19126-201ENSMUST00000207896 509 ntBASIC4.29□□□□□ -1.72
RpainQ9CWY9 AC152979.1-201ENSMUST00000218214 289 ntBASIC4.29□□□□□ -1.72
RpainQ9CWY9 n-R5s85-201ENSMUST00000083453 113 ntBASIC4.29□□□□□ -1.72
RpainQ9CWY9 Gm26329-201ENSMUST00000093723 110 ntBASIC4.29□□□□□ -1.72
RpainQ9CWY9 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RpainQ9CWY9 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC4.29□□□□□ -1.72
RpainQ9CWY9 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
RpainQ9CWY9 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
RpainQ9CWY9 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC4.28□□□□□ -1.72
RpainQ9CWY9 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
RpainQ9CWY9 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
RpainQ9CWY9 Gm43736-201ENSMUST00000196377 2281 ntBASIC4.28□□□□□ -1.72
RpainQ9CWY9 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
RpainQ9CWY9 Gm12042-201ENSMUST00000120479 301 ntBASIC4.28□□□□□ -1.72
RpainQ9CWY9 Gm13419-201ENSMUST00000121711 271 ntBASIC4.28□□□□□ -1.72
RpainQ9CWY9 Gm11506-201ENSMUST00000122414 470 ntBASIC4.28□□□□□ -1.72
RpainQ9CWY9 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC4.28□□□□□ -1.72
RpainQ9CWY9 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.28□□□□□ -1.72
RpainQ9CWY9 Gm10444-201ENSMUST00000126708 148 ntBASIC4.28□□□□□ -1.72
RpainQ9CWY9 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RpainQ9CWY9 Gm26278-201ENSMUST00000157098 132 ntBASIC4.28□□□□□ -1.72
RpainQ9CWY9 Gm24739-201ENSMUST00000158855 292 ntBASIC4.28□□□□□ -1.72
RpainQ9CWY9 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC4.28□□□□□ -1.72
RpainQ9CWY9 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC4.28□□□□□ -1.72
RpainQ9CWY9 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RpainQ9CWY9 Gm28255-201ENSMUST00000187101 694 ntBASIC4.28□□□□□ -1.72
RpainQ9CWY9 Gm29665-201ENSMUST00000191457 528 ntBASIC4.28□□□□□ -1.72
RpainQ9CWY9 Gm7871-201ENSMUST00000195346 618 ntBASIC4.28□□□□□ -1.72
RpainQ9CWY9 Igkv15-102-201ENSMUST00000197885 287 ntBASIC4.28□□□□□ -1.72
RpainQ9CWY9 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.28□□□□□ -1.72
RpainQ9CWY9 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC4.28□□□□□ -1.72
RpainQ9CWY9 Gm44157-201ENSMUST00000204720 410 ntBASIC4.28□□□□□ -1.72
RpainQ9CWY9 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC4.28□□□□□ -1.72
RpainQ9CWY9 AC100733.1-201ENSMUST00000228494 407 ntBASIC4.28□□□□□ -1.72
RpainQ9CWY9 n-R5s162-201ENSMUST00000082581 119 ntBASIC4.28□□□□□ -1.72
RpainQ9CWY9 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RpainQ9CWY9 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
RpainQ9CWY9 Gm7470-201ENSMUST00000194219 2095 ntBASIC4.28□□□□□ -1.72
RpainQ9CWY9 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
RpainQ9CWY9 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
RpainQ9CWY9 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.27□□□□□ -1.73
RpainQ9CWY9 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
RpainQ9CWY9 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC4.27□□□□□ -1.73
RpainQ9CWY9 Gm23273-201ENSMUST00000104058 135 ntBASIC4.27□□□□□ -1.73
RpainQ9CWY9 Gm15526-201ENSMUST00000112504 204 ntBASIC4.27□□□□□ -1.73
RpainQ9CWY9 Snord98-201ENSMUST00000116819 65 ntBASIC4.27□□□□□ -1.73
RpainQ9CWY9 Gm23463-201ENSMUST00000122468 99 ntBASIC4.27□□□□□ -1.73
RpainQ9CWY9 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC4.27□□□□□ -1.73
RpainQ9CWY9 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
RpainQ9CWY9 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RpainQ9CWY9 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RpainQ9CWY9 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC4.27□□□□□ -1.73
RpainQ9CWY9 Gm22435-201ENSMUST00000158552 128 ntBASIC4.27□□□□□ -1.73
RpainQ9CWY9 Gm24224-201ENSMUST00000158828 258 ntBASIC4.27□□□□□ -1.73
RpainQ9CWY9 Gm26362-201ENSMUST00000158865 315 ntBASIC4.27□□□□□ -1.73
RpainQ9CWY9 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC4.27□□□□□ -1.73
RpainQ9CWY9 Gm17528-201ENSMUST00000171026 239 ntBASIC4.27□□□□□ -1.73
RpainQ9CWY9 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
RpainQ9CWY9 Gm21816-201ENSMUST00000179255 360 ntBASIC4.27□□□□□ -1.73
RpainQ9CWY9 Gm27580-201ENSMUST00000183666 149 ntBASIC4.27□□□□□ -1.73
RpainQ9CWY9 Gm27521-201ENSMUST00000184022 64 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 126.4 ms