Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm24045-201ENSMUST00000083113 98 ntBASIC4.22□□□□□ -1.73
Brf1Q8CFK2 Gm25630-201ENSMUST00000084000 162 ntBASIC4.22□□□□□ -1.73
Brf1Q8CFK2 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Brf1Q8CFK2 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Brf1Q8CFK2 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Brf1Q8CFK2 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Brf1Q8CFK2 AC154677.1-201ENSMUST00000227636 2805 ntBASIC4.22□□□□□ -1.73
Brf1Q8CFK2 Gm15084-201ENSMUST00000178585 1502 ntBASIC4.21□□□□□ -1.73
Brf1Q8CFK2 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Brf1Q8CFK2 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Brf1Q8CFK2 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Brf1Q8CFK2 Gm13687-201ENSMUST00000119857 282 ntBASIC4.21□□□□□ -1.74
Brf1Q8CFK2 Gm8880-201ENSMUST00000121800 454 ntBASIC4.21□□□□□ -1.74
Brf1Q8CFK2 Gm24780-201ENSMUST00000157635 143 ntBASIC4.21□□□□□ -1.74
Brf1Q8CFK2 Gm23585-201ENSMUST00000157656 102 ntBASIC4.21□□□□□ -1.74
Brf1Q8CFK2 Gm23411-201ENSMUST00000157988 62 ntBASIC4.21□□□□□ -1.74
Brf1Q8CFK2 Gm16569-201ENSMUST00000160526 314 ntBASIC4.21□□□□□ -1.74
Brf1Q8CFK2 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Brf1Q8CFK2 Spin2g-201ENSMUST00000178425 687 ntBASIC4.21□□□□□ -1.74
Brf1Q8CFK2 Gm28700-201ENSMUST00000187614 579 ntBASIC4.21□□□□□ -1.74
Brf1Q8CFK2 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC4.21□□□□□ -1.74
Brf1Q8CFK2 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC4.21□□□□□ -1.74
Brf1Q8CFK2 Gm37404-201ENSMUST00000195726 359 ntBASIC4.21□□□□□ -1.74
Brf1Q8CFK2 Gm43238-201ENSMUST00000196463 359 ntBASIC4.21□□□□□ -1.74
Brf1Q8CFK2 Gm44468-201ENSMUST00000199516 105 ntBASIC4.21□□□□□ -1.74
Brf1Q8CFK2 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Brf1Q8CFK2 AC160031.2-201ENSMUST00000218242 274 ntBASIC4.21□□□□□ -1.74
Brf1Q8CFK2 AC124346.1-201ENSMUST00000218539 364 ntBASIC4.21□□□□□ -1.74
Brf1Q8CFK2 Gm46193-201ENSMUST00000219399 364 ntBASIC4.21□□□□□ -1.74
Brf1Q8CFK2 AC157572.3-201ENSMUST00000227288 303 ntBASIC4.21□□□□□ -1.74
Brf1Q8CFK2 Gm25581-201ENSMUST00000083410 164 ntBASIC4.21□□□□□ -1.74
Brf1Q8CFK2 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Brf1Q8CFK2 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Brf1Q8CFK2 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Brf1Q8CFK2 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Brf1Q8CFK2 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Brf1Q8CFK2 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Brf1Q8CFK2 Gm22831-201ENSMUST00000102473 109 ntBASIC4.2□□□□□ -1.74
Brf1Q8CFK2 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Brf1Q8CFK2 Gm22021-201ENSMUST00000104353 107 ntBASIC4.2□□□□□ -1.74
Brf1Q8CFK2 Gm16362-201ENSMUST00000135189 214 ntBASIC4.2□□□□□ -1.74
Brf1Q8CFK2 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC4.2□□□□□ -1.74
Brf1Q8CFK2 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC4.2□□□□□ -1.74
Brf1Q8CFK2 Gm25967-201ENSMUST00000157168 147 ntBASIC4.2□□□□□ -1.74
Brf1Q8CFK2 Gm24739-201ENSMUST00000158855 292 ntBASIC4.2□□□□□ -1.74
Brf1Q8CFK2 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC4.2□□□□□ -1.74
Brf1Q8CFK2 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Brf1Q8CFK2 Gm7858-201ENSMUST00000190177 622 ntBASIC4.2□□□□□ -1.74
Brf1Q8CFK2 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Brf1Q8CFK2 Ighv12-1-201ENSMUST00000195542 329 ntBASIC4.2□□□□□ -1.74
Brf1Q8CFK2 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC4.2□□□□□ -1.74
Brf1Q8CFK2 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC4.2□□□□□ -1.74
Brf1Q8CFK2 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC4.2□□□□□ -1.74
Brf1Q8CFK2 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC4.2□□□□□ -1.74
Brf1Q8CFK2 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC4.2□□□□□ -1.74
Brf1Q8CFK2 AC159203.2-201ENSMUST00000221326 193 ntBASIC4.2□□□□□ -1.74
Brf1Q8CFK2 CT571268.1-201ENSMUST00000222320 407 ntBASIC4.2□□□□□ -1.74
Brf1Q8CFK2 Gm18441-201ENSMUST00000223539 617 ntBASIC4.2□□□□□ -1.74
Brf1Q8CFK2 AC154788.1-201ENSMUST00000225003 340 ntBASIC4.2□□□□□ -1.74
Brf1Q8CFK2 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Brf1Q8CFK2 n-R5s85-201ENSMUST00000083453 113 ntBASIC4.2□□□□□ -1.74
Brf1Q8CFK2 Mir181a-2-201ENSMUST00000083489 76 ntBASIC4.2□□□□□ -1.74
Brf1Q8CFK2 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Brf1Q8CFK2 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.2□□□□□ -1.74
Brf1Q8CFK2 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Brf1Q8CFK2 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Brf1Q8CFK2 Gm5347-201ENSMUST00000210542 2327 ntBASIC4.2□□□□□ -1.74
Brf1Q8CFK2 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Brf1Q8CFK2 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Brf1Q8CFK2 Gm37848-201ENSMUST00000195288 3103 ntBASIC4.19□□□□□ -1.74
Brf1Q8CFK2 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Brf1Q8CFK2 Gm14811-201ENSMUST00000117070 117 ntBASIC4.19□□□□□ -1.74
Brf1Q8CFK2 Gm11874-201ENSMUST00000117437 130 ntBASIC4.19□□□□□ -1.74
Brf1Q8CFK2 Gm9157-201ENSMUST00000117673 225 ntBASIC4.19□□□□□ -1.74
Brf1Q8CFK2 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC4.19□□□□□ -1.74
Brf1Q8CFK2 Defa-ps13-201ENSMUST00000120695 204 ntBASIC4.19□□□□□ -1.74
Brf1Q8CFK2 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC4.19□□□□□ -1.74
Brf1Q8CFK2 Gm27592-201ENSMUST00000157729 126 ntBASIC4.19□□□□□ -1.74
Brf1Q8CFK2 Gm7925-201ENSMUST00000166690 401 ntBASIC4.19□□□□□ -1.74
Brf1Q8CFK2 Gm25243-201ENSMUST00000174912 207 ntBASIC4.19□□□□□ -1.74
Brf1Q8CFK2 Gm22174-201ENSMUST00000175050 125 ntBASIC4.19□□□□□ -1.74
Brf1Q8CFK2 Gm22692-201ENSMUST00000175055 125 ntBASIC4.19□□□□□ -1.74
Brf1Q8CFK2 Gm27634-201ENSMUST00000175060 126 ntBASIC4.19□□□□□ -1.74
Brf1Q8CFK2 Gm26460-201ENSMUST00000175061 126 ntBASIC4.19□□□□□ -1.74
Brf1Q8CFK2 Gm22460-201ENSMUST00000175269 124 ntBASIC4.19□□□□□ -1.74
Brf1Q8CFK2 Gm25535-201ENSMUST00000175364 125 ntBASIC4.19□□□□□ -1.74
Brf1Q8CFK2 Gm24365-201ENSMUST00000175384 125 ntBASIC4.19□□□□□ -1.74
Brf1Q8CFK2 Gm44310-201ENSMUST00000175424 126 ntBASIC4.19□□□□□ -1.74
Brf1Q8CFK2 Gm22639-201ENSMUST00000175591 125 ntBASIC4.19□□□□□ -1.74
Brf1Q8CFK2 Gm24979-201ENSMUST00000178626 126 ntBASIC4.19□□□□□ -1.74
Brf1Q8CFK2 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC4.19□□□□□ -1.74
Brf1Q8CFK2 Gm28030-201ENSMUST00000184987 138 ntBASIC4.19□□□□□ -1.74
Brf1Q8CFK2 Gm27743-201ENSMUST00000185136 126 ntBASIC4.19□□□□□ -1.74
Brf1Q8CFK2 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Brf1Q8CFK2 Gm44343-201ENSMUST00000196702 90 ntBASIC4.19□□□□□ -1.74
Brf1Q8CFK2 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Brf1Q8CFK2 AC125020.2-201ENSMUST00000218894 348 ntBASIC4.19□□□□□ -1.74
Brf1Q8CFK2 AC091783.5-201ENSMUST00000224928 671 ntBASIC4.19□□□□□ -1.74
Brf1Q8CFK2 Snord14e-201ENSMUST00000082857 90 ntBASIC4.19□□□□□ -1.74
Brf1Q8CFK2 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 149.2 ms