Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm44212-201ENSMUST00000205016 897 ntBASIC2.72□□□□□ -1.97
Trim3Q9R1R2 Gm45687-201ENSMUST00000209454 155 ntBASIC2.72□□□□□ -1.97
Trim3Q9R1R2 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
Trim3Q9R1R2 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Trim3Q9R1R2 AC073947.3-201ENSMUST00000215576 766 ntBASIC2.72□□□□□ -1.97
Trim3Q9R1R2 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Trim3Q9R1R2 AC102352.1-201ENSMUST00000224187 582 ntBASIC2.72□□□□□ -1.97
Trim3Q9R1R2 AC117814.1-201ENSMUST00000226135 352 ntBASIC2.72□□□□□ -1.97
Trim3Q9R1R2 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Trim3Q9R1R2 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Trim3Q9R1R2 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
Trim3Q9R1R2 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Trim3Q9R1R2 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Trim3Q9R1R2 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Trim3Q9R1R2 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Trim3Q9R1R2 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
Trim3Q9R1R2 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Trim3Q9R1R2 Gm16436-201ENSMUST00000121510 1607 ntBASIC2.71□□□□□ -1.97
Trim3Q9R1R2 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.71□□□□□ -1.97
Trim3Q9R1R2 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
Trim3Q9R1R2 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
Trim3Q9R1R2 Snord14c-201ENSMUST00000101927 86 ntBASIC2.71□□□□□ -1.98
Trim3Q9R1R2 Gm25526-201ENSMUST00000104332 132 ntBASIC2.71□□□□□ -1.98
Trim3Q9R1R2 Mir190b-201ENSMUST00000104803 80 ntBASIC2.71□□□□□ -1.98
Trim3Q9R1R2 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC2.71□□□□□ -1.98
Trim3Q9R1R2 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Trim3Q9R1R2 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC2.71□□□□□ -1.98
Trim3Q9R1R2 Gm4540-201ENSMUST00000170669 429 ntBASIC2.71□□□□□ -1.98
Trim3Q9R1R2 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC2.71□□□□□ -1.98
Trim3Q9R1R2 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC2.71□□□□□ -1.98
Trim3Q9R1R2 Gm8676-201ENSMUST00000184206 637 ntBASIC2.71□□□□□ -1.98
Trim3Q9R1R2 Mir6372-201ENSMUST00000185114 109 ntBASIC2.71□□□□□ -1.98
Trim3Q9R1R2 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC2.71□□□□□ -1.98
Trim3Q9R1R2 Gm28358-202ENSMUST00000189292 223 ntBASIC2.71□□□□□ -1.98
Trim3Q9R1R2 Igkv2-105-201ENSMUST00000196931 377 ntBASIC2.71□□□□□ -1.98
Trim3Q9R1R2 Gm42924-201ENSMUST00000197261 185 ntBASIC2.71□□□□□ -1.98
Trim3Q9R1R2 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2.71□□□□□ -1.98
Trim3Q9R1R2 Gm19649-201ENSMUST00000201126 822 ntBASIC2.71□□□□□ -1.98
Trim3Q9R1R2 Gm44135-201ENSMUST00000205221 368 ntBASIC2.71□□□□□ -1.98
Trim3Q9R1R2 Gm18488-201ENSMUST00000215082 364 ntBASIC2.71□□□□□ -1.98
Trim3Q9R1R2 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC2.71□□□□□ -1.98
Trim3Q9R1R2 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC2.71□□□□□ -1.98
Trim3Q9R1R2 AC192616.1-201ENSMUST00000221922 132 ntBASIC2.71□□□□□ -1.98
Trim3Q9R1R2 AC241593.1-201ENSMUST00000224768 397 ntBASIC2.71□□□□□ -1.98
Trim3Q9R1R2 AC158395.1-201ENSMUST00000227206 452 ntBASIC2.71□□□□□ -1.98
Trim3Q9R1R2 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Trim3Q9R1R2 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Trim3Q9R1R2 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Trim3Q9R1R2 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Trim3Q9R1R2 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Trim3Q9R1R2 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
Trim3Q9R1R2 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Trim3Q9R1R2 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Trim3Q9R1R2 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Trim3Q9R1R2 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
Trim3Q9R1R2 Gm43663-201ENSMUST00000198643 1505 ntBASIC2.7□□□□□ -1.98
Trim3Q9R1R2 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Trim3Q9R1R2 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Trim3Q9R1R2 Mir499-201ENSMUST00000102357 79 ntBASIC2.7□□□□□ -1.98
Trim3Q9R1R2 Gm25539-201ENSMUST00000116886 122 ntBASIC2.7□□□□□ -1.98
Trim3Q9R1R2 Gm12584-201ENSMUST00000117109 1105 ntBASIC2.7□□□□□ -1.98
Trim3Q9R1R2 Mup-ps10-201ENSMUST00000119626 556 ntBASIC2.7□□□□□ -1.98
Trim3Q9R1R2 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
Trim3Q9R1R2 Gm12876-201ENSMUST00000120975 408 ntBASIC2.7□□□□□ -1.98
Trim3Q9R1R2 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.7□□□□□ -1.98
Trim3Q9R1R2 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC2.7□□□□□ -1.98
Trim3Q9R1R2 Gm24736-201ENSMUST00000158862 130 ntBASIC2.7□□□□□ -1.98
Trim3Q9R1R2 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC2.7□□□□□ -1.98
Trim3Q9R1R2 Gm3104-201ENSMUST00000171004 473 ntBASIC2.7□□□□□ -1.98
Trim3Q9R1R2 Gm26585-201ENSMUST00000180890 630 ntBASIC2.7□□□□□ -1.98
Trim3Q9R1R2 Gm27582-201ENSMUST00000184084 126 ntBASIC2.7□□□□□ -1.98
Trim3Q9R1R2 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC2.7□□□□□ -1.98
Trim3Q9R1R2 Gm42805-201ENSMUST00000196158 276 ntBASIC2.7□□□□□ -1.98
Trim3Q9R1R2 Gm44476-201ENSMUST00000196225 91 ntBASIC2.7□□□□□ -1.98
Trim3Q9R1R2 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC2.7□□□□□ -1.98
Trim3Q9R1R2 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC2.7□□□□□ -1.98
Trim3Q9R1R2 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC2.7□□□□□ -1.98
Trim3Q9R1R2 AC121844.1-201ENSMUST00000218706 137 ntBASIC2.7□□□□□ -1.98
Trim3Q9R1R2 AC126673.2-201ENSMUST00000221052 686 ntBASIC2.7□□□□□ -1.98
Trim3Q9R1R2 AC124524.1-201ENSMUST00000225833 181 ntBASIC2.7□□□□□ -1.98
Trim3Q9R1R2 AC139845.2-201ENSMUST00000227504 436 ntBASIC2.7□□□□□ -1.98
Trim3Q9R1R2 AC154276.2-201ENSMUST00000227707 309 ntBASIC2.7□□□□□ -1.98
Trim3Q9R1R2 Gm25404-201ENSMUST00000082970 107 ntBASIC2.7□□□□□ -1.98
Trim3Q9R1R2 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.7□□□□□ -1.98
Trim3Q9R1R2 Gm45872-201ENSMUST00000209804 1584 ntBASIC2.7□□□□□ -1.98
Trim3Q9R1R2 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Mir582-201ENSMUST00000103758 81 ntBASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Gm14982-201ENSMUST00000121102 442 ntBASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Gm25102-201ENSMUST00000122479 112 ntBASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Gm26424-201ENSMUST00000122530 104 ntBASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Gm2020-201ENSMUST00000145242 579 ntBASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Gm16588-201ENSMUST00000162889 355 ntBASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Gm17377-201ENSMUST00000165184 207 ntBASIC2.69□□□□□ -1.98
Trim3Q9R1R2 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 158 ms