Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm26401-201ENSMUST00000158502 76 ntBASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Gm24769-201ENSMUST00000158506 129 ntBASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Gm18340-201ENSMUST00000196342 609 ntBASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 AC130829.3-201ENSMUST00000222735 154 ntBASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Gm25739-201ENSMUST00000082886 107 ntBASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Col4a4Q9QZR9 Gm6429-201ENSMUST00000117144 475 ntBASIC2.17□□□□□ -2.06
Col4a4Q9QZR9 Gm12042-201ENSMUST00000120479 301 ntBASIC2.17□□□□□ -2.06
Col4a4Q9QZR9 Gm24840-201ENSMUST00000122603 147 ntBASIC2.17□□□□□ -2.06
Col4a4Q9QZR9 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC2.17□□□□□ -2.06
Col4a4Q9QZR9 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Col4a4Q9QZR9 Mup-ps2-201ENSMUST00000142602 533 ntBASIC2.17□□□□□ -2.06
Col4a4Q9QZR9 Gm23034-201ENSMUST00000158001 147 ntBASIC2.17□□□□□ -2.06
Col4a4Q9QZR9 Gm24076-201ENSMUST00000158179 94 ntBASIC2.17□□□□□ -2.06
Col4a4Q9QZR9 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC2.17□□□□□ -2.06
Col4a4Q9QZR9 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC2.17□□□□□ -2.06
Col4a4Q9QZR9 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Col4a4Q9QZR9 Gm27163-201ENSMUST00000184767 409 ntBASIC2.17□□□□□ -2.06
Col4a4Q9QZR9 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC2.17□□□□□ -2.06
Col4a4Q9QZR9 Gm29107-201ENSMUST00000190910 347 ntBASIC2.17□□□□□ -2.06
Col4a4Q9QZR9 Gm37193-201ENSMUST00000193087 513 ntBASIC2.17□□□□□ -2.06
Col4a4Q9QZR9 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC2.17□□□□□ -2.06
Col4a4Q9QZR9 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC2.17□□□□□ -2.06
Col4a4Q9QZR9 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC2.17□□□□□ -2.06
Col4a4Q9QZR9 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC2.17□□□□□ -2.06
Col4a4Q9QZR9 Gm45189-201ENSMUST00000208567 363 ntBASIC2.17□□□□□ -2.06
Col4a4Q9QZR9 AC159380.1-201ENSMUST00000218096 121 ntBASIC2.17□□□□□ -2.06
Col4a4Q9QZR9 AC192616.1-201ENSMUST00000221922 132 ntBASIC2.17□□□□□ -2.06
Col4a4Q9QZR9 AC140210.1-201ENSMUST00000224961 534 ntBASIC2.17□□□□□ -2.06
Col4a4Q9QZR9 CT572983.1-201ENSMUST00000226895 514 ntBASIC2.17□□□□□ -2.06
Col4a4Q9QZR9 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.17□□□□□ -2.06
Col4a4Q9QZR9 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Col4a4Q9QZR9 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Col4a4Q9QZR9 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Col4a4Q9QZR9 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Col4a4Q9QZR9 Gm22578-201ENSMUST00000083730 107 ntBASIC2.17□□□□□ -2.06
Col4a4Q9QZR9 Olfr203-201ENSMUST00000089305 924 ntBASIC2.17□□□□□ -2.06
Col4a4Q9QZR9 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Col4a4Q9QZR9 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Gm25313-201ENSMUST00000101817 116 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Mir804-201ENSMUST00000103251 95 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Gm12782-201ENSMUST00000117519 727 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Defa-ps1-201ENSMUST00000119062 282 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Gm14898-201ENSMUST00000120202 645 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Defa-ps6-201ENSMUST00000122172 282 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Gm24592-201ENSMUST00000122505 106 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Gm24061-201ENSMUST00000157489 120 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Gm26345-201ENSMUST00000157534 120 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Gm2966-201ENSMUST00000166052 481 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Gm17204-201ENSMUST00000167936 478 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Gm22111-201ENSMUST00000178010 79 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Gm23687-201ENSMUST00000178664 79 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Gm24566-201ENSMUST00000179286 79 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Gm23305-201ENSMUST00000179342 79 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Gm23287-201ENSMUST00000179427 116 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Gm26389-201ENSMUST00000179819 79 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Gm22130-201ENSMUST00000179979 79 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Gm23143-201ENSMUST00000180137 116 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Gm22393-201ENSMUST00000180153 79 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Gm25085-201ENSMUST00000180298 79 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Gm27025-201ENSMUST00000182392 942 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Gm5731-201ENSMUST00000190969 481 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Gm38329-201ENSMUST00000193473 427 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Gm44300-201ENSMUST00000196792 121 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Gm43345-201ENSMUST00000199484 269 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Gm31520-201ENSMUST00000203048 733 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Gm31532-201ENSMUST00000203555 767 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Gm5317-201ENSMUST00000204445 847 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 AC156574.2-201ENSMUST00000228023 282 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 CT030684.2-201ENSMUST00000228946 826 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Gm24871-201ENSMUST00000083099 116 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Gm24611-201ENSMUST00000083272 107 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Gm26176-201ENSMUST00000083795 105 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Rnu5g-201ENSMUST00000093721 116 ntBASIC2.16□□□□□ -2.06
Col4a4Q9QZR9 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
Col4a4Q9QZR9 Gm13678-201ENSMUST00000118926 340 ntBASIC2.15□□□□□ -2.06
Col4a4Q9QZR9 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC2.15□□□□□ -2.06
Col4a4Q9QZR9 Gm22159-201ENSMUST00000158412 130 ntBASIC2.15□□□□□ -2.06
Col4a4Q9QZR9 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.06
Col4a4Q9QZR9 Gm27522-201ENSMUST00000183949 230 ntBASIC2.15□□□□□ -2.06
Col4a4Q9QZR9 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 159.7 ms