Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm28330-201ENSMUST00000190353 171 ntBASIC4.68□□□□□ -1.66
Ubp1Q811S7 Gm32308-201ENSMUST00000203053 280 ntBASIC4.68□□□□□ -1.66
Ubp1Q811S7 Gm45380-201ENSMUST00000210465 315 ntBASIC4.68□□□□□ -1.66
Ubp1Q811S7 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC4.68□□□□□ -1.66
Ubp1Q811S7 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC4.68□□□□□ -1.66
Ubp1Q811S7 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC4.68□□□□□ -1.66
Ubp1Q811S7 Gm5175-202ENSMUST00000219699 529 ntBASIC4.68□□□□□ -1.66
Ubp1Q811S7 AC158525.1-201ENSMUST00000223806 576 ntBASIC4.68□□□□□ -1.66
Ubp1Q811S7 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Ubp1Q811S7 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Ubp1Q811S7 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Ubp1Q811S7 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Ubp1Q811S7 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC4.68□□□□□ -1.66
Ubp1Q811S7 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Ubp1Q811S7 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Ubp1Q811S7 Gm43654-201ENSMUST00000200664 3417 ntBASIC4.68□□□□□ -1.66
Ubp1Q811S7 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Ubp1Q811S7 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Ubp1Q811S7 Gm5596-201ENSMUST00000207988 2421 ntBASIC4.67□□□□□ -1.66
Ubp1Q811S7 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ubp1Q811S7 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.67□□□□□ -1.66
Ubp1Q811S7 Gm37941-201ENSMUST00000192170 2309 ntBASIC4.67□□□□□ -1.66
Ubp1Q811S7 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Ubp1Q811S7 Gm25875-201ENSMUST00000104323 107 ntBASIC4.67□□□□□ -1.66
Ubp1Q811S7 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC4.67□□□□□ -1.66
Ubp1Q811S7 Gm8129-201ENSMUST00000118230 213 ntBASIC4.67□□□□□ -1.66
Ubp1Q811S7 Gm15936-201ENSMUST00000118706 460 ntBASIC4.67□□□□□ -1.66
Ubp1Q811S7 Gm14877-201ENSMUST00000119803 478 ntBASIC4.67□□□□□ -1.66
Ubp1Q811S7 Gm12071-201ENSMUST00000121968 469 ntBASIC4.67□□□□□ -1.66
Ubp1Q811S7 Gm13149-201ENSMUST00000122071 339 ntBASIC4.67□□□□□ -1.66
Ubp1Q811S7 Gm24629-201ENSMUST00000122762 89 ntBASIC4.67□□□□□ -1.66
Ubp1Q811S7 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC4.67□□□□□ -1.66
Ubp1Q811S7 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Ubp1Q811S7 Gm23196-201ENSMUST00000158806 107 ntBASIC4.67□□□□□ -1.66
Ubp1Q811S7 Gm24086-201ENSMUST00000175171 98 ntBASIC4.67□□□□□ -1.66
Ubp1Q811S7 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC4.67□□□□□ -1.66
Ubp1Q811S7 Gm43829-201ENSMUST00000196191 3802 ntBASIC4.67□□□□□ -1.66
Ubp1Q811S7 Gm43250-201ENSMUST00000196536 273 ntBASIC4.67□□□□□ -1.66
Ubp1Q811S7 Gm8874-201ENSMUST00000196826 286 ntBASIC4.67□□□□□ -1.66
Ubp1Q811S7 Gm43524-201ENSMUST00000197278 298 ntBASIC4.67□□□□□ -1.66
Ubp1Q811S7 AC140785.1-201ENSMUST00000217782 383 ntBASIC4.67□□□□□ -1.66
Ubp1Q811S7 Gm22247-201ENSMUST00000082476 131 ntBASIC4.67□□□□□ -1.66
Ubp1Q811S7 Snora52-201ENSMUST00000082732 137 ntBASIC4.67□□□□□ -1.66
Ubp1Q811S7 Gm23454-201ENSMUST00000083332 133 ntBASIC4.67□□□□□ -1.66
Ubp1Q811S7 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Ubp1Q811S7 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Ubp1Q811S7 Gm36931-201ENSMUST00000192997 4801 ntBASIC4.67□□□□□ -1.66
Ubp1Q811S7 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC4.67□□□□□ -1.66
Ubp1Q811S7 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
Ubp1Q811S7 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Ubp1Q811S7 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ubp1Q811S7 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Ubp1Q811S7 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.66□□□□□ -1.66
Ubp1Q811S7 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC4.66□□□□□ -1.66
Ubp1Q811S7 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Ubp1Q811S7 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
Ubp1Q811S7 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Ubp1Q811S7 Gm43326-201ENSMUST00000198459 1638 ntBASIC4.66□□□□□ -1.66
Ubp1Q811S7 Gm24117-201ENSMUST00000103973 133 ntBASIC4.66□□□□□ -1.66
Ubp1Q811S7 Gm23879-201ENSMUST00000116874 126 ntBASIC4.66□□□□□ -1.66
Ubp1Q811S7 Gm15313-201ENSMUST00000119179 282 ntBASIC4.66□□□□□ -1.66
Ubp1Q811S7 Gm11366-201ENSMUST00000119279 429 ntBASIC4.66□□□□□ -1.66
Ubp1Q811S7 Defa-ps8-201ENSMUST00000120972 279 ntBASIC4.66□□□□□ -1.66
Ubp1Q811S7 Gm14768-201ENSMUST00000122126 678 ntBASIC4.66□□□□□ -1.66
Ubp1Q811S7 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.66□□□□□ -1.66
Ubp1Q811S7 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC4.66□□□□□ -1.66
Ubp1Q811S7 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC4.66□□□□□ -1.66
Ubp1Q811S7 Gm24914-201ENSMUST00000157285 313 ntBASIC4.66□□□□□ -1.66
Ubp1Q811S7 Gm26310-201ENSMUST00000157766 117 ntBASIC4.66□□□□□ -1.66
Ubp1Q811S7 Gm8292-201ENSMUST00000162574 396 ntBASIC4.66□□□□□ -1.66
Ubp1Q811S7 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Ubp1Q811S7 Gm7958-201ENSMUST00000178255 468 ntBASIC4.66□□□□□ -1.66
Ubp1Q811S7 Gm25450-201ENSMUST00000179144 107 ntBASIC4.66□□□□□ -1.66
Ubp1Q811S7 Gm7950-201ENSMUST00000179633 468 ntBASIC4.66□□□□□ -1.66
Ubp1Q811S7 Gm27699-201ENSMUST00000183553 180 ntBASIC4.66□□□□□ -1.66
Ubp1Q811S7 Gm8296-201ENSMUST00000185597 524 ntBASIC4.66□□□□□ -1.66
Ubp1Q811S7 Gm5372-201ENSMUST00000187540 409 ntBASIC4.66□□□□□ -1.66
Ubp1Q811S7 Gm43600-201ENSMUST00000202134 223 ntBASIC4.66□□□□□ -1.66
Ubp1Q811S7 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC4.66□□□□□ -1.66
Ubp1Q811S7 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC4.66□□□□□ -1.66
Ubp1Q811S7 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Ubp1Q811S7 AC139294.1-201ENSMUST00000226708 571 ntBASIC4.66□□□□□ -1.66
Ubp1Q811S7 Gm22220-201ENSMUST00000082671 149 ntBASIC4.66□□□□□ -1.66
Ubp1Q811S7 Gm25140-201ENSMUST00000083254 140 ntBASIC4.66□□□□□ -1.66
Ubp1Q811S7 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Ubp1Q811S7 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Ubp1Q811S7 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Ubp1Q811S7 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Ubp1Q811S7 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Ubp1Q811S7 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
Ubp1Q811S7 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.66
Ubp1Q811S7 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC4.65□□□□□ -1.66
Ubp1Q811S7 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Ubp1Q811S7 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC4.65□□□□□ -1.66
Ubp1Q811S7 Gm15560-201ENSMUST00000117107 643 ntBASIC4.65□□□□□ -1.67
Ubp1Q811S7 Gm13155-201ENSMUST00000119277 646 ntBASIC4.65□□□□□ -1.67
Ubp1Q811S7 Gm8178-201ENSMUST00000121570 646 ntBASIC4.65□□□□□ -1.67
Ubp1Q811S7 Gm12893-201ENSMUST00000121732 275 ntBASIC4.65□□□□□ -1.67
Ubp1Q811S7 Gm11819-201ENSMUST00000122192 372 ntBASIC4.65□□□□□ -1.67
Ubp1Q811S7 Gm14562-201ENSMUST00000129885 543 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 170.7 ms