Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm29573-201ENSMUST00000190291 919 ntBASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm38075-201ENSMUST00000191979 920 ntBASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm43171-201ENSMUST00000199882 291 ntBASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 AC153526.1-201ENSMUST00000219750 190 ntBASIC3.17□□□□□ -1.9
Trim58Q5NCC9 AC122484.1-201ENSMUST00000221578 177 ntBASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Gm22970-201ENSMUST00000083304 186 ntBASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Trim58Q5NCC9 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Trim58Q5NCC9 Mir599-201ENSMUST00000102378 88 ntBASIC3.16□□□□□ -1.9
Trim58Q5NCC9 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Trim58Q5NCC9 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
Trim58Q5NCC9 Gm14579-201ENSMUST00000117068 283 ntBASIC3.16□□□□□ -1.9
Trim58Q5NCC9 Gm11219-201ENSMUST00000118565 358 ntBASIC3.16□□□□□ -1.9
Trim58Q5NCC9 Gm2318-201ENSMUST00000119623 639 ntBASIC3.16□□□□□ -1.9
Trim58Q5NCC9 Gm2768-201ENSMUST00000121062 250 ntBASIC3.16□□□□□ -1.9
Trim58Q5NCC9 Gm13862-201ENSMUST00000121220 197 ntBASIC3.16□□□□□ -1.9
Trim58Q5NCC9 Gm23885-201ENSMUST00000122682 294 ntBASIC3.16□□□□□ -1.9
Trim58Q5NCC9 Gm26393-201ENSMUST00000157625 129 ntBASIC3.16□□□□□ -1.9
Trim58Q5NCC9 Gm22769-201ENSMUST00000158367 98 ntBASIC3.16□□□□□ -1.9
Trim58Q5NCC9 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
Trim58Q5NCC9 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
Trim58Q5NCC9 Gm7398-201ENSMUST00000178589 639 ntBASIC3.16□□□□□ -1.9
Trim58Q5NCC9 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Trim58Q5NCC9 Gm20773-201ENSMUST00000178940 681 ntBASIC3.16□□□□□ -1.9
Trim58Q5NCC9 Gm7375-201ENSMUST00000179232 639 ntBASIC3.16□□□□□ -1.9
Trim58Q5NCC9 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Trim58Q5NCC9 Gm3681-201ENSMUST00000179940 639 ntBASIC3.16□□□□□ -1.9
Trim58Q5NCC9 Gm25873-201ENSMUST00000180317 107 ntBASIC3.16□□□□□ -1.9
Trim58Q5NCC9 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC3.16□□□□□ -1.9
Trim58Q5NCC9 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Trim58Q5NCC9 Gm29389-201ENSMUST00000191562 352 ntBASIC3.16□□□□□ -1.9
Trim58Q5NCC9 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC3.16□□□□□ -1.9
Trim58Q5NCC9 Gm37417-201ENSMUST00000195257 454 ntBASIC3.16□□□□□ -1.9
Trim58Q5NCC9 Gm44393-201ENSMUST00000197418 138 ntBASIC3.16□□□□□ -1.9
Trim58Q5NCC9 Gm42818-201ENSMUST00000198869 987 ntBASIC3.16□□□□□ -1.9
Trim58Q5NCC9 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC3.16□□□□□ -1.9
Trim58Q5NCC9 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC3.16□□□□□ -1.9
Trim58Q5NCC9 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC3.16□□□□□ -1.9
Trim58Q5NCC9 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC3.16□□□□□ -1.9
Trim58Q5NCC9 Gm8031-201ENSMUST00000213430 626 ntBASIC3.16□□□□□ -1.9
Trim58Q5NCC9 AC153541.1-201ENSMUST00000213786 294 ntBASIC3.16□□□□□ -1.9
Trim58Q5NCC9 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC3.16□□□□□ -1.9
Trim58Q5NCC9 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC3.16□□□□□ -1.9
Trim58Q5NCC9 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Trim58Q5NCC9 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Trim58Q5NCC9 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Trim58Q5NCC9 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Trim58Q5NCC9 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Trim58Q5NCC9 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Trim58Q5NCC9 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Trim58Q5NCC9 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Trim58Q5NCC9 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.9
Trim58Q5NCC9 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Trim58Q5NCC9 Gm14669-201ENSMUST00000118841 250 ntBASIC3.15□□□□□ -1.91
Trim58Q5NCC9 Gm13627-201ENSMUST00000119700 706 ntBASIC3.15□□□□□ -1.91
Trim58Q5NCC9 Gm11891-201ENSMUST00000121241 619 ntBASIC3.15□□□□□ -1.91
Trim58Q5NCC9 Gm24958-201ENSMUST00000158009 97 ntBASIC3.15□□□□□ -1.91
Trim58Q5NCC9 Gm24393-201ENSMUST00000158135 97 ntBASIC3.15□□□□□ -1.91
Trim58Q5NCC9 Gm24212-201ENSMUST00000158258 132 ntBASIC3.15□□□□□ -1.91
Trim58Q5NCC9 Gm16588-201ENSMUST00000162889 355 ntBASIC3.15□□□□□ -1.91
Trim58Q5NCC9 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC3.15□□□□□ -1.91
Trim58Q5NCC9 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Trim58Q5NCC9 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC3.15□□□□□ -1.91
Trim58Q5NCC9 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.15□□□□□ -1.91
Trim58Q5NCC9 Gm3852-201ENSMUST00000182781 264 ntBASIC3.15□□□□□ -1.91
Trim58Q5NCC9 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC3.15□□□□□ -1.91
Trim58Q5NCC9 Gm28802-201ENSMUST00000188624 944 ntBASIC3.15□□□□□ -1.91
Trim58Q5NCC9 Gm43669-201ENSMUST00000198229 436 ntBASIC3.15□□□□□ -1.91
Trim58Q5NCC9 Gm18635-201ENSMUST00000199020 1060 ntBASIC3.15□□□□□ -1.91
Trim58Q5NCC9 Gm44125-201ENSMUST00000203068 448 ntBASIC3.15□□□□□ -1.91
Trim58Q5NCC9 Gm44449-201ENSMUST00000203610 153 ntBASIC3.15□□□□□ -1.91
Trim58Q5NCC9 Gm19244-201ENSMUST00000204340 253 ntBASIC3.15□□□□□ -1.91
Trim58Q5NCC9 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC3.15□□□□□ -1.91
Trim58Q5NCC9 Gm45192-201ENSMUST00000206749 283 ntBASIC3.15□□□□□ -1.91
Trim58Q5NCC9 Gm17991-201ENSMUST00000208139 297 ntBASIC3.15□□□□□ -1.91
Trim58Q5NCC9 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC3.15□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 146.9 ms