Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 AC154329.2-201ENSMUST00000225257 383 ntBASIC2.2□□□□□ -2.06
Col4a4Q9QZR9 AC102575.1-201ENSMUST00000225348 547 ntBASIC2.2□□□□□ -2.06
Col4a4Q9QZR9 AC124729.1-202ENSMUST00000225587 938 ntBASIC2.2□□□□□ -2.06
Col4a4Q9QZR9 AC118639.1-201ENSMUST00000227204 338 ntBASIC2.2□□□□□ -2.06
Col4a4Q9QZR9 AC121114.1-201ENSMUST00000228522 570 ntBASIC2.2□□□□□ -2.06
Col4a4Q9QZR9 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Col4a4Q9QZR9 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Col4a4Q9QZR9 Gm5471-201ENSMUST00000072732 337 ntBASIC2.2□□□□□ -2.06
Col4a4Q9QZR9 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Col4a4Q9QZR9 Snora33-201ENSMUST00000093556 129 ntBASIC2.2□□□□□ -2.06
Col4a4Q9QZR9 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
Col4a4Q9QZR9 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Col4a4Q9QZR9 BC022960-201ENSMUST00000119987 1815 ntBASIC2.2□□□□□ -2.06
Col4a4Q9QZR9 AC116557.1-201ENSMUST00000219494 1521 ntBASIC2.2□□□□□ -2.06
Col4a4Q9QZR9 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Gm24098-201ENSMUST00000102075 109 ntBASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Gm25381-201ENSMUST00000102078 109 ntBASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Gm15001-201ENSMUST00000117657 795 ntBASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Gm9850-201ENSMUST00000117916 227 ntBASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Gm25318-201ENSMUST00000122554 314 ntBASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Gm23505-201ENSMUST00000158989 130 ntBASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Gm25069-201ENSMUST00000175238 86 ntBASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Gm25525-201ENSMUST00000177701 107 ntBASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Gm26178-201ENSMUST00000177706 107 ntBASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Gm26465-201ENSMUST00000178517 107 ntBASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Gm25021-201ENSMUST00000179184 107 ntBASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Gm22995-201ENSMUST00000179670 107 ntBASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Gm24424-201ENSMUST00000179714 107 ntBASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Gm24389-201ENSMUST00000179962 107 ntBASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Gm25672-201ENSMUST00000180111 107 ntBASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Gm29163-201ENSMUST00000188029 107 ntBASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Gm37599-201ENSMUST00000193067 489 ntBASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Gm35570-201ENSMUST00000198730 681 ntBASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Gm43239-201ENSMUST00000200131 201 ntBASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Gm18268-201ENSMUST00000208445 943 ntBASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Gm23815-201ENSMUST00000083231 107 ntBASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Gm23520-201ENSMUST00000093736 107 ntBASIC2.19□□□□□ -2.06
Col4a4Q9QZR9 Gm13080-201ENSMUST00000120556 420 ntBASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Gm15244-201ENSMUST00000121122 130 ntBASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Gm14577-201ENSMUST00000121134 256 ntBASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Gm24478-201ENSMUST00000157439 158 ntBASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Gm22818-201ENSMUST00000157446 104 ntBASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Gm24237-201ENSMUST00000157790 132 ntBASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Mir3106-201ENSMUST00000175401 82 ntBASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Gm27155-201ENSMUST00000183716 898 ntBASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Gm27817-201ENSMUST00000184302 233 ntBASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 AC117656.3-204ENSMUST00000225656 859 ntBASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 AC131068.1-201ENSMUST00000226891 482 ntBASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Gm23455-201ENSMUST00000083331 100 ntBASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Gm22723-201ENSMUST00000083820 129 ntBASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Gm27013-202ENSMUST00000205067 1436 ntBASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Mir669p-2-201ENSMUST00000103868 87 ntBASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Mir669p-1-201ENSMUST00000103884 87 ntBASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Gm25509-201ENSMUST00000116985 106 ntBASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Gm15159-201ENSMUST00000117062 764 ntBASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Gm14795-201ENSMUST00000118461 471 ntBASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Gm9225-201ENSMUST00000121921 836 ntBASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Gm23111-201ENSMUST00000122652 105 ntBASIC2.18□□□□□ -2.06
Col4a4Q9QZR9 Gm24394-201ENSMUST00000158141 123 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 140.2 ms