Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
Ubp1Q811S7 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
Ubp1Q811S7 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Ubp1Q811S7 n-R5s67-201ENSMUST00000104336 114 ntBASIC4.71□□□□□ -1.66
Ubp1Q811S7 Gm24683-201ENSMUST00000104840 88 ntBASIC4.71□□□□□ -1.66
Ubp1Q811S7 Gm23829-201ENSMUST00000157392 270 ntBASIC4.71□□□□□ -1.66
Ubp1Q811S7 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Ubp1Q811S7 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC4.71□□□□□ -1.66
Ubp1Q811S7 Gm20630-201ENSMUST00000177387 551 ntBASIC4.71□□□□□ -1.66
Ubp1Q811S7 Gm28921-201ENSMUST00000190219 378 ntBASIC4.71□□□□□ -1.66
Ubp1Q811S7 Gm37682-201ENSMUST00000191776 522 ntBASIC4.71□□□□□ -1.66
Ubp1Q811S7 Mir3535-201ENSMUST00000197651 147 ntBASIC4.71□□□□□ -1.66
Ubp1Q811S7 Gm43583-201ENSMUST00000199235 303 ntBASIC4.71□□□□□ -1.66
Ubp1Q811S7 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC4.71□□□□□ -1.66
Ubp1Q811S7 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Ubp1Q811S7 Gm44816-201ENSMUST00000206666 477 ntBASIC4.71□□□□□ -1.66
Ubp1Q811S7 Gm2607-201ENSMUST00000212389 627 ntBASIC4.71□□□□□ -1.66
Ubp1Q811S7 Gm45879-201ENSMUST00000212521 392 ntBASIC4.71□□□□□ -1.66
Ubp1Q811S7 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC4.71□□□□□ -1.66
Ubp1Q811S7 AC154262.1-201ENSMUST00000225976 286 ntBASIC4.71□□□□□ -1.66
Ubp1Q811S7 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
Ubp1Q811S7 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Ubp1Q811S7 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Ubp1Q811S7 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Ubp1Q811S7 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Ubp1Q811S7 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Ubp1Q811S7 Gm24160-201ENSMUST00000104594 126 ntBASIC4.7□□□□□ -1.66
Ubp1Q811S7 Gm13321-201ENSMUST00000117101 400 ntBASIC4.7□□□□□ -1.66
Ubp1Q811S7 Gm15613-201ENSMUST00000118396 326 ntBASIC4.7□□□□□ -1.66
Ubp1Q811S7 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC4.7□□□□□ -1.66
Ubp1Q811S7 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Ubp1Q811S7 Gm22036-201ENSMUST00000157279 215 ntBASIC4.7□□□□□ -1.66
Ubp1Q811S7 Gm23864-201ENSMUST00000177607 107 ntBASIC4.7□□□□□ -1.66
Ubp1Q811S7 Gm25939-201ENSMUST00000179876 191 ntBASIC4.7□□□□□ -1.66
Ubp1Q811S7 Gm26828-201ENSMUST00000180640 172 ntBASIC4.7□□□□□ -1.66
Ubp1Q811S7 Gm29262-201ENSMUST00000190084 196 ntBASIC4.7□□□□□ -1.66
Ubp1Q811S7 Trbv11-201ENSMUST00000194354 260 ntBASIC4.7□□□□□ -1.66
Ubp1Q811S7 Mir7661-201ENSMUST00000197023 61 ntBASIC4.7□□□□□ -1.66
Ubp1Q811S7 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Ubp1Q811S7 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC4.7□□□□□ -1.66
Ubp1Q811S7 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Ubp1Q811S7 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC4.7□□□□□ -1.66
Ubp1Q811S7 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.7□□□□□ -1.66
Ubp1Q811S7 Gm5373-201ENSMUST00000212113 1050 ntBASIC4.7□□□□□ -1.66
Ubp1Q811S7 AC158803.3-201ENSMUST00000220024 211 ntBASIC4.7□□□□□ -1.66
Ubp1Q811S7 AC211878.2-201ENSMUST00000222486 488 ntBASIC4.7□□□□□ -1.66
Ubp1Q811S7 Gm23625-201ENSMUST00000082457 100 ntBASIC4.7□□□□□ -1.66
Ubp1Q811S7 Mir338-201ENSMUST00000083666 98 ntBASIC4.7□□□□□ -1.66
Ubp1Q811S7 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.7□□□□□ -1.66
Ubp1Q811S7 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Ubp1Q811S7 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Ubp1Q811S7 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Ubp1Q811S7 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Ubp1Q811S7 Gm44439-201ENSMUST00000203379 3592 ntBASIC4.7□□□□□ -1.66
Ubp1Q811S7 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Ubp1Q811S7 Gm45324-201ENSMUST00000211193 5638 ntBASIC4.69□□□□□ -1.66
Ubp1Q811S7 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Ubp1Q811S7 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC4.69□□□□□ -1.66
Ubp1Q811S7 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
Ubp1Q811S7 Gm36960-201ENSMUST00000195491 2035 ntBASIC4.69□□□□□ -1.66
Ubp1Q811S7 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Ubp1Q811S7 Gm22020-201ENSMUST00000104358 136 ntBASIC4.69□□□□□ -1.66
Ubp1Q811S7 Gm12820-201ENSMUST00000119233 342 ntBASIC4.69□□□□□ -1.66
Ubp1Q811S7 Gm15926-201ENSMUST00000120492 550 ntBASIC4.69□□□□□ -1.66
Ubp1Q811S7 Gm8840-201ENSMUST00000122454 386 ntBASIC4.69□□□□□ -1.66
Ubp1Q811S7 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC4.69□□□□□ -1.66
Ubp1Q811S7 Gm24217-201ENSMUST00000158260 133 ntBASIC4.69□□□□□ -1.66
Ubp1Q811S7 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.69□□□□□ -1.66
Ubp1Q811S7 Gm22308-201ENSMUST00000177609 107 ntBASIC4.69□□□□□ -1.66
Ubp1Q811S7 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.69□□□□□ -1.66
Ubp1Q811S7 Gm28744-201ENSMUST00000189939 340 ntBASIC4.69□□□□□ -1.66
Ubp1Q811S7 Gm44010-201ENSMUST00000204432 331 ntBASIC4.69□□□□□ -1.66
Ubp1Q811S7 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Ubp1Q811S7 AC161256.1-201ENSMUST00000217312 213 ntBASIC4.69□□□□□ -1.66
Ubp1Q811S7 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC4.69□□□□□ -1.66
Ubp1Q811S7 Gm22997-201ENSMUST00000082845 107 ntBASIC4.69□□□□□ -1.66
Ubp1Q811S7 Gm25698-201ENSMUST00000082897 107 ntBASIC4.69□□□□□ -1.66
Ubp1Q811S7 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4.69□□□□□ -1.66
Ubp1Q811S7 n-R5s3-201ENSMUST00000083879 112 ntBASIC4.69□□□□□ -1.66
Ubp1Q811S7 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Ubp1Q811S7 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Ubp1Q811S7 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Ubp1Q811S7 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Ubp1Q811S7 Gm36944-201ENSMUST00000192257 2759 ntBASIC4.69□□□□□ -1.66
Ubp1Q811S7 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Ubp1Q811S7 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC4.69□□□□□ -1.66
Ubp1Q811S7 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Ubp1Q811S7 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Ubp1Q811S7 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
Ubp1Q811S7 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Ubp1Q811S7 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Ubp1Q811S7 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Ubp1Q811S7 Gm22194-201ENSMUST00000116869 95 ntBASIC4.68□□□□□ -1.66
Ubp1Q811S7 Gm15012-201ENSMUST00000119176 106 ntBASIC4.68□□□□□ -1.66
Ubp1Q811S7 Gm24188-201ENSMUST00000157980 108 ntBASIC4.68□□□□□ -1.66
Ubp1Q811S7 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Ubp1Q811S7 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Ubp1Q811S7 Gm17100-201ENSMUST00000168963 272 ntBASIC4.68□□□□□ -1.66
Ubp1Q811S7 Gm27803-201ENSMUST00000183763 119 ntBASIC4.68□□□□□ -1.66
Ubp1Q811S7 Gm28849-201ENSMUST00000188127 174 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 137.8 ms