Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Trim3Q9R1R2 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
Trim3Q9R1R2 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.97
Trim3Q9R1R2 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.77□□□□□ -1.97
Trim3Q9R1R2 Gm37387-201ENSMUST00000192201 1806 ntBASIC2.77□□□□□ -1.97
Trim3Q9R1R2 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.77□□□□□ -1.97
Trim3Q9R1R2 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Trim3Q9R1R2 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Trim3Q9R1R2 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Trim3Q9R1R2 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Trim3Q9R1R2 Gm22939-201ENSMUST00000103958 131 ntBASIC2.77□□□□□ -1.97
Trim3Q9R1R2 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Trim3Q9R1R2 Gm6923-201ENSMUST00000118343 406 ntBASIC2.77□□□□□ -1.97
Trim3Q9R1R2 Gm15177-201ENSMUST00000120491 577 ntBASIC2.77□□□□□ -1.97
Trim3Q9R1R2 Gm2768-201ENSMUST00000121062 250 ntBASIC2.77□□□□□ -1.97
Trim3Q9R1R2 Gm11456-201ENSMUST00000121070 256 ntBASIC2.77□□□□□ -1.97
Trim3Q9R1R2 Gm26271-201ENSMUST00000158349 104 ntBASIC2.77□□□□□ -1.97
Trim3Q9R1R2 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.77□□□□□ -1.97
Trim3Q9R1R2 Gm16111-201ENSMUST00000162128 285 ntBASIC2.77□□□□□ -1.97
Trim3Q9R1R2 Gm5277-201ENSMUST00000164923 556 ntBASIC2.77□□□□□ -1.97
Trim3Q9R1R2 Gm17054-201ENSMUST00000169811 259 ntBASIC2.77□□□□□ -1.97
Trim3Q9R1R2 Gm17186-201ENSMUST00000171742 456 ntBASIC2.77□□□□□ -1.97
Trim3Q9R1R2 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Trim3Q9R1R2 Gm18520-201ENSMUST00000174783 658 ntBASIC2.77□□□□□ -1.97
Trim3Q9R1R2 Gm23145-201ENSMUST00000178912 79 ntBASIC2.77□□□□□ -1.97
Trim3Q9R1R2 Gm23860-201ENSMUST00000179446 132 ntBASIC2.77□□□□□ -1.97
Trim3Q9R1R2 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Trim3Q9R1R2 Gm37987-201ENSMUST00000194999 825 ntBASIC2.77□□□□□ -1.97
Trim3Q9R1R2 Gm43104-201ENSMUST00000197234 311 ntBASIC2.77□□□□□ -1.97
Trim3Q9R1R2 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC2.77□□□□□ -1.97
Trim3Q9R1R2 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Trim3Q9R1R2 Gm46146-201ENSMUST00000217483 346 ntBASIC2.77□□□□□ -1.97
Trim3Q9R1R2 AC144783.2-201ENSMUST00000219089 195 ntBASIC2.77□□□□□ -1.97
Trim3Q9R1R2 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Trim3Q9R1R2 Gm23932-201ENSMUST00000082914 107 ntBASIC2.77□□□□□ -1.97
Trim3Q9R1R2 Mir184-201ENSMUST00000083662 69 ntBASIC2.77□□□□□ -1.97
Trim3Q9R1R2 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC2.77□□□□□ -1.97
Trim3Q9R1R2 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Trim3Q9R1R2 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
Trim3Q9R1R2 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Trim3Q9R1R2 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Trim3Q9R1R2 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
Trim3Q9R1R2 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC2.76□□□□□ -1.97
Trim3Q9R1R2 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Trim3Q9R1R2 Gm43665-201ENSMUST00000198672 1659 ntBASIC2.76□□□□□ -1.97
Trim3Q9R1R2 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
Trim3Q9R1R2 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Trim3Q9R1R2 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Trim3Q9R1R2 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC2.76□□□□□ -1.97
Trim3Q9R1R2 Gm14359-201ENSMUST00000118883 424 ntBASIC2.76□□□□□ -1.97
Trim3Q9R1R2 Gm13751-201ENSMUST00000120280 752 ntBASIC2.76□□□□□ -1.97
Trim3Q9R1R2 Gm14360-201ENSMUST00000120670 393 ntBASIC2.76□□□□□ -1.97
Trim3Q9R1R2 Gm12723-201ENSMUST00000120700 451 ntBASIC2.76□□□□□ -1.97
Trim3Q9R1R2 Gm24836-201ENSMUST00000122609 108 ntBASIC2.76□□□□□ -1.97
Trim3Q9R1R2 Gm9498-201ENSMUST00000140849 291 ntBASIC2.76□□□□□ -1.97
Trim3Q9R1R2 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC2.76□□□□□ -1.97
Trim3Q9R1R2 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC2.76□□□□□ -1.97
Trim3Q9R1R2 Gm22322-201ENSMUST00000157151 111 ntBASIC2.76□□□□□ -1.97
Trim3Q9R1R2 Gm26099-201ENSMUST00000157248 109 ntBASIC2.76□□□□□ -1.97
Trim3Q9R1R2 Gm23317-201ENSMUST00000157999 129 ntBASIC2.76□□□□□ -1.97
Trim3Q9R1R2 Gm22853-201ENSMUST00000174974 131 ntBASIC2.76□□□□□ -1.97
Trim3Q9R1R2 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC2.76□□□□□ -1.97
Trim3Q9R1R2 Gm28628-201ENSMUST00000187006 264 ntBASIC2.76□□□□□ -1.97
Trim3Q9R1R2 Gm28629-201ENSMUST00000187309 263 ntBASIC2.76□□□□□ -1.97
Trim3Q9R1R2 Gm29640-201ENSMUST00000187972 278 ntBASIC2.76□□□□□ -1.97
Trim3Q9R1R2 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC2.76□□□□□ -1.97
Trim3Q9R1R2 Gm19498-201ENSMUST00000191128 331 ntBASIC2.76□□□□□ -1.97
Trim3Q9R1R2 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC2.76□□□□□ -1.97
Trim3Q9R1R2 Gm18956-201ENSMUST00000192857 480 ntBASIC2.76□□□□□ -1.97
Trim3Q9R1R2 Gm30341-201ENSMUST00000194363 289 ntBASIC2.76□□□□□ -1.97
Trim3Q9R1R2 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
Trim3Q9R1R2 Igkv11-114-201ENSMUST00000200013 346 ntBASIC2.76□□□□□ -1.97
Trim3Q9R1R2 Gm19457-201ENSMUST00000200995 448 ntBASIC2.76□□□□□ -1.97
Trim3Q9R1R2 Gm44125-201ENSMUST00000203068 448 ntBASIC2.76□□□□□ -1.97
Trim3Q9R1R2 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Trim3Q9R1R2 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Trim3Q9R1R2 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC2.76□□□□□ -1.97
Trim3Q9R1R2 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Trim3Q9R1R2 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC2.76□□□□□ -1.97
Trim3Q9R1R2 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Trim3Q9R1R2 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
Trim3Q9R1R2 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Trim3Q9R1R2 Gm13504-201ENSMUST00000117490 316 ntBASIC2.75□□□□□ -1.97
Trim3Q9R1R2 Gm15312-201ENSMUST00000118827 271 ntBASIC2.75□□□□□ -1.97
Trim3Q9R1R2 Gm7071-201ENSMUST00000120458 462 ntBASIC2.75□□□□□ -1.97
Trim3Q9R1R2 Gm15309-201ENSMUST00000121644 240 ntBASIC2.75□□□□□ -1.97
Trim3Q9R1R2 Gm11229-201ENSMUST00000121993 437 ntBASIC2.75□□□□□ -1.97
Trim3Q9R1R2 Gm24517-201ENSMUST00000122560 107 ntBASIC2.75□□□□□ -1.97
Trim3Q9R1R2 Gm23213-201ENSMUST00000122715 313 ntBASIC2.75□□□□□ -1.97
Trim3Q9R1R2 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC2.75□□□□□ -1.97
Trim3Q9R1R2 Gm24787-201ENSMUST00000157380 123 ntBASIC2.75□□□□□ -1.97
Trim3Q9R1R2 Gm23380-201ENSMUST00000158448 103 ntBASIC2.75□□□□□ -1.97
Trim3Q9R1R2 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC2.75□□□□□ -1.97
Trim3Q9R1R2 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC2.75□□□□□ -1.97
Trim3Q9R1R2 Gm17183-201ENSMUST00000171170 493 ntBASIC2.75□□□□□ -1.97
Trim3Q9R1R2 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC2.75□□□□□ -1.97
Trim3Q9R1R2 Gm20651-201ENSMUST00000177219 329 ntBASIC2.75□□□□□ -1.97
Trim3Q9R1R2 Gm5709-201ENSMUST00000177879 1165 ntBASIC2.75□□□□□ -1.97
Trim3Q9R1R2 Gm27161-201ENSMUST00000183960 562 ntBASIC2.75□□□□□ -1.97
Trim3Q9R1R2 Gm29658-201ENSMUST00000185404 230 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 224 ms