Protein–RNA interactions for Protein: Q9CWY9

Rpain, RPA-interacting protein, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpainQ9CWY9 Gm29026-201ENSMUST00000187787 315 ntBASIC4.37□□□□□ -1.71
RpainQ9CWY9 Gm28752-201ENSMUST00000188340 315 ntBASIC4.37□□□□□ -1.71
RpainQ9CWY9 Gm28797-201ENSMUST00000188543 315 ntBASIC4.37□□□□□ -1.71
RpainQ9CWY9 Gm28855-201ENSMUST00000188680 315 ntBASIC4.37□□□□□ -1.71
RpainQ9CWY9 Gm29378-201ENSMUST00000188723 315 ntBASIC4.37□□□□□ -1.71
RpainQ9CWY9 Gm28569-201ENSMUST00000188748 315 ntBASIC4.37□□□□□ -1.71
RpainQ9CWY9 Gm28120-201ENSMUST00000188812 315 ntBASIC4.37□□□□□ -1.71
RpainQ9CWY9 Gm28369-201ENSMUST00000188993 315 ntBASIC4.37□□□□□ -1.71
RpainQ9CWY9 Gm29037-201ENSMUST00000189092 313 ntBASIC4.37□□□□□ -1.71
RpainQ9CWY9 Gm28909-201ENSMUST00000189406 315 ntBASIC4.37□□□□□ -1.71
RpainQ9CWY9 Gm28705-201ENSMUST00000189548 315 ntBASIC4.37□□□□□ -1.71
RpainQ9CWY9 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RpainQ9CWY9 Gm28861-201ENSMUST00000189681 315 ntBASIC4.37□□□□□ -1.71
RpainQ9CWY9 Gm29180-201ENSMUST00000190003 315 ntBASIC4.37□□□□□ -1.71
RpainQ9CWY9 Gm28939-201ENSMUST00000190351 315 ntBASIC4.37□□□□□ -1.71
RpainQ9CWY9 Gm29479-201ENSMUST00000190352 455 ntBASIC4.37□□□□□ -1.71
RpainQ9CWY9 Gm28223-201ENSMUST00000190469 315 ntBASIC4.37□□□□□ -1.71
RpainQ9CWY9 Gm29575-201ENSMUST00000190597 315 ntBASIC4.37□□□□□ -1.71
RpainQ9CWY9 Gm29092-201ENSMUST00000190768 315 ntBASIC4.37□□□□□ -1.71
RpainQ9CWY9 Gm29469-201ENSMUST00000191448 315 ntBASIC4.37□□□□□ -1.71
RpainQ9CWY9 Gm8745-201ENSMUST00000207846 782 ntBASIC4.37□□□□□ -1.71
RpainQ9CWY9 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC4.37□□□□□ -1.71
RpainQ9CWY9 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC4.37□□□□□ -1.71
RpainQ9CWY9 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC4.37□□□□□ -1.71
RpainQ9CWY9 AC123656.2-201ENSMUST00000226726 227 ntBASIC4.37□□□□□ -1.71
RpainQ9CWY9 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
RpainQ9CWY9 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RpainQ9CWY9 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC4.37□□□□□ -1.71
RpainQ9CWY9 Gm38106-201ENSMUST00000194107 2534 ntBASIC4.37□□□□□ -1.71
RpainQ9CWY9 Gm37298-201ENSMUST00000193770 3868 ntBASIC4.37□□□□□ -1.71
RpainQ9CWY9 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RpainQ9CWY9 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
RpainQ9CWY9 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
RpainQ9CWY9 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RpainQ9CWY9 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RpainQ9CWY9 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
RpainQ9CWY9 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
RpainQ9CWY9 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RpainQ9CWY9 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
RpainQ9CWY9 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RpainQ9CWY9 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RpainQ9CWY9 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC4.36□□□□□ -1.71
RpainQ9CWY9 Gm24120-201ENSMUST00000103978 129 ntBASIC4.36□□□□□ -1.71
RpainQ9CWY9 Gm13046-201ENSMUST00000117391 501 ntBASIC4.36□□□□□ -1.71
RpainQ9CWY9 Gm13314-201ENSMUST00000118742 335 ntBASIC4.36□□□□□ -1.71
RpainQ9CWY9 Gm14541-201ENSMUST00000118985 157 ntBASIC4.36□□□□□ -1.71
RpainQ9CWY9 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC4.36□□□□□ -1.71
RpainQ9CWY9 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC4.36□□□□□ -1.71
RpainQ9CWY9 Gm8289-201ENSMUST00000144814 1182 ntBASIC4.36□□□□□ -1.71
RpainQ9CWY9 Gm25058-201ENSMUST00000157365 128 ntBASIC4.36□□□□□ -1.71
RpainQ9CWY9 Gm23743-201ENSMUST00000157389 274 ntBASIC4.36□□□□□ -1.71
RpainQ9CWY9 Gm22789-201ENSMUST00000157884 130 ntBASIC4.36□□□□□ -1.71
RpainQ9CWY9 Gm27896-201ENSMUST00000175162 317 ntBASIC4.36□□□□□ -1.71
RpainQ9CWY9 Gm27834-201ENSMUST00000183427 125 ntBASIC4.36□□□□□ -1.71
RpainQ9CWY9 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC4.36□□□□□ -1.71
RpainQ9CWY9 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC4.36□□□□□ -1.71
RpainQ9CWY9 Gm28267-201ENSMUST00000191093 265 ntBASIC4.36□□□□□ -1.71
RpainQ9CWY9 Gm37701-201ENSMUST00000192947 1100 ntBASIC4.36□□□□□ -1.71
RpainQ9CWY9 Gm37817-201ENSMUST00000195276 434 ntBASIC4.36□□□□□ -1.71
RpainQ9CWY9 Gm37029-201ENSMUST00000195773 239 ntBASIC4.36□□□□□ -1.71
RpainQ9CWY9 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC4.36□□□□□ -1.71
RpainQ9CWY9 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC4.36□□□□□ -1.71
RpainQ9CWY9 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
RpainQ9CWY9 Gm46190-201ENSMUST00000219650 427 ntBASIC4.36□□□□□ -1.71
RpainQ9CWY9 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RpainQ9CWY9 Gm23928-201ENSMUST00000082469 145 ntBASIC4.36□□□□□ -1.71
RpainQ9CWY9 Gm22997-201ENSMUST00000082845 107 ntBASIC4.36□□□□□ -1.71
RpainQ9CWY9 Mir346-201ENSMUST00000083547 98 ntBASIC4.36□□□□□ -1.71
RpainQ9CWY9 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
RpainQ9CWY9 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
RpainQ9CWY9 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RpainQ9CWY9 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
RpainQ9CWY9 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
RpainQ9CWY9 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
RpainQ9CWY9 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RpainQ9CWY9 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RpainQ9CWY9 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
RpainQ9CWY9 Gm23178-201ENSMUST00000116782 95 ntBASIC4.35□□□□□ -1.71
RpainQ9CWY9 Gm7219-201ENSMUST00000119619 297 ntBASIC4.35□□□□□ -1.71
RpainQ9CWY9 Gm12486-201ENSMUST00000120887 541 ntBASIC4.35□□□□□ -1.71
RpainQ9CWY9 Gm7327-201ENSMUST00000120925 652 ntBASIC4.35□□□□□ -1.71
RpainQ9CWY9 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC4.35□□□□□ -1.71
RpainQ9CWY9 Gm23789-201ENSMUST00000122536 301 ntBASIC4.35□□□□□ -1.71
RpainQ9CWY9 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.35□□□□□ -1.71
RpainQ9CWY9 Gm25264-201ENSMUST00000158519 117 ntBASIC4.35□□□□□ -1.71
RpainQ9CWY9 Gm24577-201ENSMUST00000158580 63 ntBASIC4.35□□□□□ -1.71
RpainQ9CWY9 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
RpainQ9CWY9 Gm3027-201ENSMUST00000167579 451 ntBASIC4.35□□□□□ -1.71
RpainQ9CWY9 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
RpainQ9CWY9 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
RpainQ9CWY9 Gm3104-201ENSMUST00000171004 473 ntBASIC4.35□□□□□ -1.71
RpainQ9CWY9 Gm7958-201ENSMUST00000178255 468 ntBASIC4.35□□□□□ -1.71
RpainQ9CWY9 Gm7950-201ENSMUST00000179633 468 ntBASIC4.35□□□□□ -1.71
RpainQ9CWY9 Gm38332-201ENSMUST00000194189 147 ntBASIC4.35□□□□□ -1.71
RpainQ9CWY9 Gm42570-201ENSMUST00000195937 292 ntBASIC4.35□□□□□ -1.71
RpainQ9CWY9 Gm5552-201ENSMUST00000197149 515 ntBASIC4.35□□□□□ -1.71
RpainQ9CWY9 Gm42526-201ENSMUST00000198956 393 ntBASIC4.35□□□□□ -1.71
RpainQ9CWY9 Gm43651-201ENSMUST00000199796 439 ntBASIC4.35□□□□□ -1.71
RpainQ9CWY9 Gm44371-201ENSMUST00000204148 467 ntBASIC4.35□□□□□ -1.71
RpainQ9CWY9 Gm45252-201ENSMUST00000211579 397 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 122.8 ms