Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm25833-201ENSMUST00000104137 133 ntBASIC4.3□□□□□ -1.72
Brf1Q8CFK2 Gm22032-201ENSMUST00000116946 116 ntBASIC4.3□□□□□ -1.72
Brf1Q8CFK2 Gm14890-201ENSMUST00000117660 676 ntBASIC4.3□□□□□ -1.72
Brf1Q8CFK2 Gm11556-201ENSMUST00000120751 288 ntBASIC4.3□□□□□ -1.72
Brf1Q8CFK2 Gm25105-201ENSMUST00000122477 130 ntBASIC4.3□□□□□ -1.72
Brf1Q8CFK2 Gm24635-201ENSMUST00000122712 128 ntBASIC4.3□□□□□ -1.72
Brf1Q8CFK2 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC4.3□□□□□ -1.72
Brf1Q8CFK2 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC4.3□□□□□ -1.72
Brf1Q8CFK2 Gm25827-201ENSMUST00000157089 107 ntBASIC4.3□□□□□ -1.72
Brf1Q8CFK2 Gm24546-201ENSMUST00000158652 102 ntBASIC4.3□□□□□ -1.72
Brf1Q8CFK2 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC4.3□□□□□ -1.72
Brf1Q8CFK2 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Brf1Q8CFK2 Gm27773-201ENSMUST00000184087 78 ntBASIC4.3□□□□□ -1.72
Brf1Q8CFK2 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.3□□□□□ -1.72
Brf1Q8CFK2 Gm6651-201ENSMUST00000189471 271 ntBASIC4.3□□□□□ -1.72
Brf1Q8CFK2 Gm37568-201ENSMUST00000191755 364 ntBASIC4.3□□□□□ -1.72
Brf1Q8CFK2 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC4.3□□□□□ -1.72
Brf1Q8CFK2 Trbv24-201ENSMUST00000194614 347 ntBASIC4.3□□□□□ -1.72
Brf1Q8CFK2 Gm7652-201ENSMUST00000200440 1151 ntBASIC4.3□□□□□ -1.72
Brf1Q8CFK2 Gm7407-201ENSMUST00000208301 568 ntBASIC4.3□□□□□ -1.72
Brf1Q8CFK2 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Brf1Q8CFK2 AC161572.1-201ENSMUST00000227486 640 ntBASIC4.3□□□□□ -1.72
Brf1Q8CFK2 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Brf1Q8CFK2 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Brf1Q8CFK2 Gm23423-201ENSMUST00000082782 106 ntBASIC4.3□□□□□ -1.72
Brf1Q8CFK2 Gm5670-201ENSMUST00000093546 372 ntBASIC4.3□□□□□ -1.72
Brf1Q8CFK2 Olfr895-201ENSMUST00000093864 951 ntBASIC4.3□□□□□ -1.72
Brf1Q8CFK2 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Brf1Q8CFK2 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Gm24275-201ENSMUST00000116780 146 ntBASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Gm14355-201ENSMUST00000117352 264 ntBASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Gm6584-201ENSMUST00000119671 447 ntBASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Gm15037-201ENSMUST00000120358 259 ntBASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Gm11582-201ENSMUST00000121041 236 ntBASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Gm6565-201ENSMUST00000121217 438 ntBASIC4.29□□□□□ -1.72
Brf1Q8CFK2 n-R5s192-201ENSMUST00000122577 119 ntBASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Gm14333-201ENSMUST00000130484 264 ntBASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC4.29□□□□□ -1.72
Brf1Q8CFK2 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Gm22034-201ENSMUST00000157283 134 ntBASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Gm24998-201ENSMUST00000157908 89 ntBASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Gm3470-201ENSMUST00000160819 420 ntBASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Gm15900-201ENSMUST00000161584 342 ntBASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Gm23523-201ENSMUST00000180190 107 ntBASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Mir6385-201ENSMUST00000184295 105 ntBASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Gm27445-201ENSMUST00000184484 72 ntBASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Gm28598-201ENSMUST00000186490 615 ntBASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Gm29268-201ENSMUST00000188669 615 ntBASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Gm29218-205ENSMUST00000190846 615 ntBASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Gm28978-201ENSMUST00000191120 615 ntBASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Gm37172-201ENSMUST00000191926 615 ntBASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Gm42832-201ENSMUST00000196361 745 ntBASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Gm44355-201ENSMUST00000200417 104 ntBASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Gm8942-201ENSMUST00000217892 400 ntBASIC4.29□□□□□ -1.72
Brf1Q8CFK2 AC147240.1-201ENSMUST00000218767 431 ntBASIC4.29□□□□□ -1.72
Brf1Q8CFK2 AC117202.2-201ENSMUST00000226491 1101 ntBASIC4.29□□□□□ -1.72
Brf1Q8CFK2 AC115291.2-201ENSMUST00000228335 437 ntBASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Gm22423-201ENSMUST00000082861 184 ntBASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Gm26055-201ENSMUST00000083038 107 ntBASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Gm23096-201ENSMUST00000083447 107 ntBASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Brf1Q8CFK2 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Gm43883-201ENSMUST00000204002 3750 ntBASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Brf1Q8CFK2 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC4.28□□□□□ -1.72
Brf1Q8CFK2 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Brf1Q8CFK2 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Brf1Q8CFK2 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Brf1Q8CFK2 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Brf1Q8CFK2 Gm26145-201ENSMUST00000104476 127 ntBASIC4.28□□□□□ -1.72
Brf1Q8CFK2 Gm25315-201ENSMUST00000116823 121 ntBASIC4.28□□□□□ -1.72
Brf1Q8CFK2 Gm11576-201ENSMUST00000117433 417 ntBASIC4.28□□□□□ -1.72
Brf1Q8CFK2 Gm5762-201ENSMUST00000119204 258 ntBASIC4.28□□□□□ -1.72
Brf1Q8CFK2 Gm12837-201ENSMUST00000120131 373 ntBASIC4.28□□□□□ -1.72
Brf1Q8CFK2 Gm13511-201ENSMUST00000121167 363 ntBASIC4.28□□□□□ -1.72
Brf1Q8CFK2 Gm11849-201ENSMUST00000121293 261 ntBASIC4.28□□□□□ -1.72
Brf1Q8CFK2 Gm25781-201ENSMUST00000122527 84 ntBASIC4.28□□□□□ -1.72
Brf1Q8CFK2 Gm23867-201ENSMUST00000122649 274 ntBASIC4.28□□□□□ -1.72
Brf1Q8CFK2 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC4.28□□□□□ -1.72
Brf1Q8CFK2 Gm24505-201ENSMUST00000157682 126 ntBASIC4.28□□□□□ -1.72
Brf1Q8CFK2 Gm23666-201ENSMUST00000158053 116 ntBASIC4.28□□□□□ -1.72
Brf1Q8CFK2 Gm23068-201ENSMUST00000158239 293 ntBASIC4.28□□□□□ -1.72
Brf1Q8CFK2 Gm24737-201ENSMUST00000158861 100 ntBASIC4.28□□□□□ -1.72
Brf1Q8CFK2 Gm27477-201ENSMUST00000184649 143 ntBASIC4.28□□□□□ -1.72
Brf1Q8CFK2 Gm28148-201ENSMUST00000186924 697 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 150.9 ms