Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm44223-201ENSMUST00000204854 114 ntBASIC3.23□□□□□ -1.89
Trim58Q5NCC9 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Trim58Q5NCC9 Gm18602-201ENSMUST00000209794 851 ntBASIC3.23□□□□□ -1.89
Trim58Q5NCC9 Gm29817-201ENSMUST00000210098 172 ntBASIC3.23□□□□□ -1.89
Trim58Q5NCC9 Zfp640-202ENSMUST00000224116 1562 ntBASIC3.23□□□□□ -1.89
Trim58Q5NCC9 AC090496.1-201ENSMUST00000226020 260 ntBASIC3.23□□□□□ -1.89
Trim58Q5NCC9 AC115878.1-201ENSMUST00000227247 334 ntBASIC3.23□□□□□ -1.89
Trim58Q5NCC9 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC3.23□□□□□ -1.89
Trim58Q5NCC9 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC3.23□□□□□ -1.89
Trim58Q5NCC9 Gm25008-201ENSMUST00000083809 81 ntBASIC3.23□□□□□ -1.89
Trim58Q5NCC9 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC3.23□□□□□ -1.89
Trim58Q5NCC9 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Trim58Q5NCC9 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC3.23□□□□□ -1.89
Trim58Q5NCC9 Mir878-201ENSMUST00000104680 78 ntBASIC3.22□□□□□ -1.89
Trim58Q5NCC9 Gm14125-201ENSMUST00000113442 680 ntBASIC3.22□□□□□ -1.89
Trim58Q5NCC9 Mir466k-201ENSMUST00000116774 122 ntBASIC3.22□□□□□ -1.89
Trim58Q5NCC9 Gm12016-201ENSMUST00000119079 681 ntBASIC3.22□□□□□ -1.89
Trim58Q5NCC9 Gm12935-201ENSMUST00000119352 246 ntBASIC3.22□□□□□ -1.89
Trim58Q5NCC9 Gm16458-201ENSMUST00000121428 502 ntBASIC3.22□□□□□ -1.89
Trim58Q5NCC9 Gm25052-201ENSMUST00000122661 158 ntBASIC3.22□□□□□ -1.89
Trim58Q5NCC9 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC3.22□□□□□ -1.89
Trim58Q5NCC9 Gm26215-201ENSMUST00000158584 139 ntBASIC3.22□□□□□ -1.89
Trim58Q5NCC9 Gm2855-201ENSMUST00000166765 456 ntBASIC3.22□□□□□ -1.89
Trim58Q5NCC9 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC3.22□□□□□ -1.89
Trim58Q5NCC9 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC3.22□□□□□ -1.89
Trim58Q5NCC9 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC3.22□□□□□ -1.89
Trim58Q5NCC9 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC3.22□□□□□ -1.89
Trim58Q5NCC9 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC3.22□□□□□ -1.89
Trim58Q5NCC9 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC3.22□□□□□ -1.89
Trim58Q5NCC9 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC3.22□□□□□ -1.89
Trim58Q5NCC9 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC3.22□□□□□ -1.89
Trim58Q5NCC9 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC3.22□□□□□ -1.89
Trim58Q5NCC9 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC3.22□□□□□ -1.89
Trim58Q5NCC9 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Trim58Q5NCC9 Gm19224-201ENSMUST00000190477 793 ntBASIC3.22□□□□□ -1.89
Trim58Q5NCC9 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC3.22□□□□□ -1.89
Trim58Q5NCC9 Gm43264-201ENSMUST00000202284 325 ntBASIC3.22□□□□□ -1.89
Trim58Q5NCC9 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC3.22□□□□□ -1.89
Trim58Q5NCC9 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Trim58Q5NCC9 AC145736.1-201ENSMUST00000214661 479 ntBASIC3.22□□□□□ -1.89
Trim58Q5NCC9 Gm8249-201ENSMUST00000219225 465 ntBASIC3.22□□□□□ -1.89
Trim58Q5NCC9 AC116656.1-201ENSMUST00000227040 755 ntBASIC3.22□□□□□ -1.89
Trim58Q5NCC9 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Trim58Q5NCC9 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Trim58Q5NCC9 Gm10025-201ENSMUST00000079568 372 ntBASIC3.22□□□□□ -1.89
Trim58Q5NCC9 n-R5s40-201ENSMUST00000082475 124 ntBASIC3.22□□□□□ -1.89
Trim58Q5NCC9 Gm22293-201ENSMUST00000083314 109 ntBASIC3.22□□□□□ -1.89
Trim58Q5NCC9 Gm42721-201ENSMUST00000197165 1523 ntBASIC3.22□□□□□ -1.89
Trim58Q5NCC9 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
Trim58Q5NCC9 Gm43326-201ENSMUST00000198459 1638 ntBASIC3.22□□□□□ -1.89
Trim58Q5NCC9 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
Trim58Q5NCC9 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
Trim58Q5NCC9 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
Trim58Q5NCC9 Gm37387-201ENSMUST00000192201 1806 ntBASIC3.21□□□□□ -1.89
Trim58Q5NCC9 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.21□□□□□ -1.9
Trim58Q5NCC9 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Trim58Q5NCC9 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Trim58Q5NCC9 Gm14537-201ENSMUST00000117464 599 ntBASIC3.21□□□□□ -1.9
Trim58Q5NCC9 Gm14360-201ENSMUST00000120670 393 ntBASIC3.21□□□□□ -1.9
Trim58Q5NCC9 Gm11321-201ENSMUST00000121257 902 ntBASIC3.21□□□□□ -1.9
Trim58Q5NCC9 Gm7209-201ENSMUST00000122339 333 ntBASIC3.21□□□□□ -1.9
Trim58Q5NCC9 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Trim58Q5NCC9 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.21□□□□□ -1.9
Trim58Q5NCC9 Gm22416-201ENSMUST00000158590 88 ntBASIC3.21□□□□□ -1.9
Trim58Q5NCC9 Gm25119-201ENSMUST00000158815 88 ntBASIC3.21□□□□□ -1.9
Trim58Q5NCC9 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC3.21□□□□□ -1.9
Trim58Q5NCC9 Gm25198-201ENSMUST00000178574 110 ntBASIC3.21□□□□□ -1.9
Trim58Q5NCC9 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC3.21□□□□□ -1.9
Trim58Q5NCC9 Gm28648-201ENSMUST00000190092 343 ntBASIC3.21□□□□□ -1.9
Trim58Q5NCC9 Gm5731-201ENSMUST00000190969 481 ntBASIC3.21□□□□□ -1.9
Trim58Q5NCC9 Gm37337-201ENSMUST00000192601 993 ntBASIC3.21□□□□□ -1.9
Trim58Q5NCC9 Gm17771-201ENSMUST00000194477 1147 ntBASIC3.21□□□□□ -1.9
Trim58Q5NCC9 Gm37845-201ENSMUST00000194977 355 ntBASIC3.21□□□□□ -1.9
Trim58Q5NCC9 Gm43096-201ENSMUST00000196173 421 ntBASIC3.21□□□□□ -1.9
Trim58Q5NCC9 Gm42465-201ENSMUST00000197036 492 ntBASIC3.21□□□□□ -1.9
Trim58Q5NCC9 Gm44181-201ENSMUST00000203106 483 ntBASIC3.21□□□□□ -1.9
Trim58Q5NCC9 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC3.21□□□□□ -1.9
Trim58Q5NCC9 Gm45658-201ENSMUST00000209197 580 ntBASIC3.21□□□□□ -1.9
Trim58Q5NCC9 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC3.21□□□□□ -1.9
Trim58Q5NCC9 Gm45742-201ENSMUST00000212400 433 ntBASIC3.21□□□□□ -1.9
Trim58Q5NCC9 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC3.21□□□□□ -1.9
Trim58Q5NCC9 Gm18026-201ENSMUST00000222789 727 ntBASIC3.21□□□□□ -1.9
Trim58Q5NCC9 AC108945.1-201ENSMUST00000226477 94 ntBASIC3.21□□□□□ -1.9
Trim58Q5NCC9 Gm22265-201ENSMUST00000082947 116 ntBASIC3.21□□□□□ -1.9
Trim58Q5NCC9 Gm8074-201ENSMUST00000095071 252 ntBASIC3.21□□□□□ -1.9
Trim58Q5NCC9 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Trim58Q5NCC9 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.2□□□□□ -1.9
Trim58Q5NCC9 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Trim58Q5NCC9 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Trim58Q5NCC9 Snora36b-201ENSMUST00000104383 132 ntBASIC3.2□□□□□ -1.9
Trim58Q5NCC9 Gm24982-201ENSMUST00000104456 132 ntBASIC3.2□□□□□ -1.9
Trim58Q5NCC9 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC3.2□□□□□ -1.9
Trim58Q5NCC9 Gm15025-201ENSMUST00000118434 418 ntBASIC3.2□□□□□ -1.9
Trim58Q5NCC9 Gm15312-201ENSMUST00000118827 271 ntBASIC3.2□□□□□ -1.9
Trim58Q5NCC9 Gm14731-201ENSMUST00000119216 376 ntBASIC3.2□□□□□ -1.9
Trim58Q5NCC9 Gm14128-201ENSMUST00000119514 1011 ntBASIC3.2□□□□□ -1.9
Trim58Q5NCC9 Gm15309-201ENSMUST00000121644 240 ntBASIC3.2□□□□□ -1.9
Trim58Q5NCC9 Gm5967-201ENSMUST00000172723 494 ntBASIC3.2□□□□□ -1.9
Trim58Q5NCC9 Gm23402-201ENSMUST00000178130 107 ntBASIC3.2□□□□□ -1.9
Trim58Q5NCC9 Gm27505-201ENSMUST00000185071 110 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 142.7 ms