Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 AC140785.1-201ENSMUST00000217782 383 ntBASIC2.81□□□□□ -1.96
Trim3Q9R1R2 CT009550.5-201ENSMUST00000226286 382 ntBASIC2.81□□□□□ -1.96
Trim3Q9R1R2 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Trim3Q9R1R2 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Trim3Q9R1R2 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Trim3Q9R1R2 Gm24707-201ENSMUST00000082812 107 ntBASIC2.81□□□□□ -1.96
Trim3Q9R1R2 Mir16-2-201ENSMUST00000083672 95 ntBASIC2.81□□□□□ -1.96
Trim3Q9R1R2 Gm43300-201ENSMUST00000198540 2043 ntBASIC2.81□□□□□ -1.96
Trim3Q9R1R2 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Trim3Q9R1R2 Gm23175-201ENSMUST00000104371 132 ntBASIC2.8□□□□□ -1.96
Trim3Q9R1R2 Gm14159-201ENSMUST00000119832 451 ntBASIC2.8□□□□□ -1.96
Trim3Q9R1R2 Gm12412-201ENSMUST00000121867 328 ntBASIC2.8□□□□□ -1.96
Trim3Q9R1R2 Gm12095-201ENSMUST00000121962 816 ntBASIC2.8□□□□□ -1.96
Trim3Q9R1R2 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC2.8□□□□□ -1.96
Trim3Q9R1R2 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Trim3Q9R1R2 Gm26348-201ENSMUST00000157528 240 ntBASIC2.8□□□□□ -1.96
Trim3Q9R1R2 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC2.8□□□□□ -1.96
Trim3Q9R1R2 Gm22858-201ENSMUST00000174972 76 ntBASIC2.8□□□□□ -1.96
Trim3Q9R1R2 Gm26177-201ENSMUST00000178683 107 ntBASIC2.8□□□□□ -1.96
Trim3Q9R1R2 Gm21894-201ENSMUST00000179631 546 ntBASIC2.8□□□□□ -1.96
Trim3Q9R1R2 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC2.8□□□□□ -1.96
Trim3Q9R1R2 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Trim3Q9R1R2 Gm37616-201ENSMUST00000193974 322 ntBASIC2.8□□□□□ -1.96
Trim3Q9R1R2 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC2.8□□□□□ -1.96
Trim3Q9R1R2 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC2.8□□□□□ -1.96
Trim3Q9R1R2 Gm43521-201ENSMUST00000197838 255 ntBASIC2.8□□□□□ -1.96
Trim3Q9R1R2 Gm43107-201ENSMUST00000198729 255 ntBASIC2.8□□□□□ -1.96
Trim3Q9R1R2 Gm43746-201ENSMUST00000200028 317 ntBASIC2.8□□□□□ -1.96
Trim3Q9R1R2 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC2.8□□□□□ -1.96
Trim3Q9R1R2 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC2.8□□□□□ -1.96
Trim3Q9R1R2 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC2.8□□□□□ -1.96
Trim3Q9R1R2 Gm46233-201ENSMUST00000217831 449 ntBASIC2.8□□□□□ -1.96
Trim3Q9R1R2 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC2.8□□□□□ -1.96
Trim3Q9R1R2 Gm4921-201ENSMUST00000219804 992 ntBASIC2.8□□□□□ -1.96
Trim3Q9R1R2 Gm2446-201ENSMUST00000220144 772 ntBASIC2.8□□□□□ -1.96
Trim3Q9R1R2 AC192616.3-201ENSMUST00000220797 1124 ntBASIC2.8□□□□□ -1.96
Trim3Q9R1R2 AC137902.2-201ENSMUST00000227989 576 ntBASIC2.8□□□□□ -1.96
Trim3Q9R1R2 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Trim3Q9R1R2 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Trim3Q9R1R2 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Trim3Q9R1R2 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Trim3Q9R1R2 Zfp640-202ENSMUST00000224116 1562 ntBASIC2.79□□□□□ -1.96
Trim3Q9R1R2 Gm16171-201ENSMUST00000118004 324 ntBASIC2.79□□□□□ -1.96
Trim3Q9R1R2 Gm11943-201ENSMUST00000119473 327 ntBASIC2.79□□□□□ -1.96
Trim3Q9R1R2 Gm14129-201ENSMUST00000122436 291 ntBASIC2.79□□□□□ -1.96
Trim3Q9R1R2 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.79□□□□□ -1.96
Trim3Q9R1R2 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC2.79□□□□□ -1.96
Trim3Q9R1R2 Gm24532-201ENSMUST00000157951 286 ntBASIC2.79□□□□□ -1.96
Trim3Q9R1R2 Gm24190-201ENSMUST00000157976 216 ntBASIC2.79□□□□□ -1.96
Trim3Q9R1R2 Gm22765-201ENSMUST00000158371 128 ntBASIC2.79□□□□□ -1.96
Trim3Q9R1R2 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.79□□□□□ -1.96
Trim3Q9R1R2 Gm26928-201ENSMUST00000182674 572 ntBASIC2.79□□□□□ -1.96
Trim3Q9R1R2 Gm27659-201ENSMUST00000183472 98 ntBASIC2.79□□□□□ -1.96
Trim3Q9R1R2 Gm27599-201ENSMUST00000183758 174 ntBASIC2.79□□□□□ -1.96
Trim3Q9R1R2 Mir8103-201ENSMUST00000183945 107 ntBASIC2.79□□□□□ -1.96
Trim3Q9R1R2 Gm27249-201ENSMUST00000185049 328 ntBASIC2.79□□□□□ -1.96
Trim3Q9R1R2 Gm28650-201ENSMUST00000188413 411 ntBASIC2.79□□□□□ -1.96
Trim3Q9R1R2 Gm6651-201ENSMUST00000189471 271 ntBASIC2.79□□□□□ -1.96
Trim3Q9R1R2 Gm37751-201ENSMUST00000192440 1198 ntBASIC2.79□□□□□ -1.96
Trim3Q9R1R2 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC2.79□□□□□ -1.96
Trim3Q9R1R2 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC2.79□□□□□ -1.96
Trim3Q9R1R2 Gm43991-201ENSMUST00000203751 274 ntBASIC2.79□□□□□ -1.96
Trim3Q9R1R2 Gm44157-201ENSMUST00000204720 410 ntBASIC2.79□□□□□ -1.96
Trim3Q9R1R2 Gm45023-201ENSMUST00000207951 379 ntBASIC2.79□□□□□ -1.96
Trim3Q9R1R2 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC2.79□□□□□ -1.96
Trim3Q9R1R2 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Trim3Q9R1R2 CR974485.1-201ENSMUST00000222408 402 ntBASIC2.79□□□□□ -1.96
Trim3Q9R1R2 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC2.79□□□□□ -1.96
Trim3Q9R1R2 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC2.79□□□□□ -1.96
Trim3Q9R1R2 AC147628.1-201ENSMUST00000228193 688 ntBASIC2.79□□□□□ -1.96
Trim3Q9R1R2 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Trim3Q9R1R2 Gm23516-201ENSMUST00000093728 107 ntBASIC2.79□□□□□ -1.96
Trim3Q9R1R2 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Trim3Q9R1R2 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Trim3Q9R1R2 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
Trim3Q9R1R2 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.78□□□□□ -1.96
Trim3Q9R1R2 AC137842.3-201ENSMUST00000228855 2397 ntBASIC2.78□□□□□ -1.96
Trim3Q9R1R2 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Trim3Q9R1R2 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC2.78□□□□□ -1.96
Trim3Q9R1R2 Gm14815-201ENSMUST00000120060 488 ntBASIC2.78□□□□□ -1.96
Trim3Q9R1R2 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Trim3Q9R1R2 Gm14069-201ENSMUST00000120815 229 ntBASIC2.78□□□□□ -1.96
Trim3Q9R1R2 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Trim3Q9R1R2 Gm24534-201ENSMUST00000157949 291 ntBASIC2.78□□□□□ -1.96
Trim3Q9R1R2 Gm25490-201ENSMUST00000158734 130 ntBASIC2.78□□□□□ -1.96
Trim3Q9R1R2 Gm3102-201ENSMUST00000164236 489 ntBASIC2.78□□□□□ -1.96
Trim3Q9R1R2 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC2.78□□□□□ -1.96
Trim3Q9R1R2 Gm18448-201ENSMUST00000186286 599 ntBASIC2.78□□□□□ -1.96
Trim3Q9R1R2 Gm43384-201ENSMUST00000200569 637 ntBASIC2.78□□□□□ -1.96
Trim3Q9R1R2 Gm45400-201ENSMUST00000211603 653 ntBASIC2.78□□□□□ -1.96
Trim3Q9R1R2 AC147633.1-201ENSMUST00000225134 259 ntBASIC2.78□□□□□ -1.96
Trim3Q9R1R2 AC164116.2-201ENSMUST00000225398 1038 ntBASIC2.78□□□□□ -1.96
Trim3Q9R1R2 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.78□□□□□ -1.96
Trim3Q9R1R2 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.78□□□□□ -1.96
Trim3Q9R1R2 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Trim3Q9R1R2 Mir103-2-201ENSMUST00000083629 86 ntBASIC2.78□□□□□ -1.96
Trim3Q9R1R2 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC2.78□□□□□ -1.96
Trim3Q9R1R2 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Trim3Q9R1R2 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Trim3Q9R1R2 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 141.8 ms