Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm5755-201ENSMUST00000152394 837 ntBASIC4.33□□□□□ -1.72
Brf1Q8CFK2 Snord92-201ENSMUST00000175548 85 ntBASIC4.33□□□□□ -1.72
Brf1Q8CFK2 Mir6715-201ENSMUST00000184990 57 ntBASIC4.33□□□□□ -1.72
Brf1Q8CFK2 Gm21673-201ENSMUST00000186640 436 ntBASIC4.33□□□□□ -1.72
Brf1Q8CFK2 Gm18505-201ENSMUST00000187360 790 ntBASIC4.33□□□□□ -1.72
Brf1Q8CFK2 Gm21135-201ENSMUST00000189023 436 ntBASIC4.33□□□□□ -1.72
Brf1Q8CFK2 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Brf1Q8CFK2 Gm19193-201ENSMUST00000190263 590 ntBASIC4.33□□□□□ -1.72
Brf1Q8CFK2 Gm33354-201ENSMUST00000195448 906 ntBASIC4.33□□□□□ -1.72
Brf1Q8CFK2 Gm19243-201ENSMUST00000198592 269 ntBASIC4.33□□□□□ -1.72
Brf1Q8CFK2 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC4.33□□□□□ -1.72
Brf1Q8CFK2 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC4.33□□□□□ -1.72
Brf1Q8CFK2 Gm44521-201ENSMUST00000206469 217 ntBASIC4.33□□□□□ -1.72
Brf1Q8CFK2 Gm34779-201ENSMUST00000210036 263 ntBASIC4.33□□□□□ -1.72
Brf1Q8CFK2 Gm8249-201ENSMUST00000219225 465 ntBASIC4.33□□□□□ -1.72
Brf1Q8CFK2 Gm2436-201ENSMUST00000219562 774 ntBASIC4.33□□□□□ -1.72
Brf1Q8CFK2 Gm8274-201ENSMUST00000219820 463 ntBASIC4.33□□□□□ -1.72
Brf1Q8CFK2 AC132954.1-201ENSMUST00000221017 342 ntBASIC4.33□□□□□ -1.72
Brf1Q8CFK2 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC4.33□□□□□ -1.72
Brf1Q8CFK2 Gm23404-201ENSMUST00000082543 97 ntBASIC4.33□□□□□ -1.72
Brf1Q8CFK2 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC4.33□□□□□ -1.72
Brf1Q8CFK2 Gm37777-201ENSMUST00000195546 3366 ntBASIC4.33□□□□□ -1.72
Brf1Q8CFK2 AC126033.1-201ENSMUST00000227628 6773 ntBASIC4.33□□□□□ -1.72
Brf1Q8CFK2 Gm17969-201ENSMUST00000185706 2557 ntBASIC4.33□□□□□ -1.72
Brf1Q8CFK2 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Brf1Q8CFK2 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Brf1Q8CFK2 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Brf1Q8CFK2 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.32□□□□□ -1.72
Brf1Q8CFK2 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Brf1Q8CFK2 AC158805.1-201ENSMUST00000218197 2631 ntBASIC4.32□□□□□ -1.72
Brf1Q8CFK2 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Brf1Q8CFK2 Gm13806-201ENSMUST00000117822 325 ntBASIC4.32□□□□□ -1.72
Brf1Q8CFK2 Gm12156-201ENSMUST00000119188 554 ntBASIC4.32□□□□□ -1.72
Brf1Q8CFK2 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC4.32□□□□□ -1.72
Brf1Q8CFK2 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC4.32□□□□□ -1.72
Brf1Q8CFK2 Ang-ps2-201ENSMUST00000178173 433 ntBASIC4.32□□□□□ -1.72
Brf1Q8CFK2 Gm21726-201ENSMUST00000179654 392 ntBASIC4.32□□□□□ -1.72
Brf1Q8CFK2 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC4.32□□□□□ -1.72
Brf1Q8CFK2 Gm37575-201ENSMUST00000195467 309 ntBASIC4.32□□□□□ -1.72
Brf1Q8CFK2 Gm44349-201ENSMUST00000197048 123 ntBASIC4.32□□□□□ -1.72
Brf1Q8CFK2 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC4.32□□□□□ -1.72
Brf1Q8CFK2 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC4.32□□□□□ -1.72
Brf1Q8CFK2 Gm19147-201ENSMUST00000199622 652 ntBASIC4.32□□□□□ -1.72
Brf1Q8CFK2 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC4.32□□□□□ -1.72
Brf1Q8CFK2 Gm7041-201ENSMUST00000201227 524 ntBASIC4.32□□□□□ -1.72
Brf1Q8CFK2 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC4.32□□□□□ -1.72
Brf1Q8CFK2 CT025606.1-201ENSMUST00000218273 324 ntBASIC4.32□□□□□ -1.72
Brf1Q8CFK2 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC4.32□□□□□ -1.72
Brf1Q8CFK2 AC126554.1-201ENSMUST00000222161 271 ntBASIC4.32□□□□□ -1.72
Brf1Q8CFK2 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Brf1Q8CFK2 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Brf1Q8CFK2 Gm25755-201ENSMUST00000083396 107 ntBASIC4.32□□□□□ -1.72
Brf1Q8CFK2 Gm37983-201ENSMUST00000193207 2006 ntBASIC4.32□□□□□ -1.72
Brf1Q8CFK2 Gm38207-201ENSMUST00000193009 3505 ntBASIC4.32□□□□□ -1.72
Brf1Q8CFK2 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Brf1Q8CFK2 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC4.32□□□□□ -1.72
Brf1Q8CFK2 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Brf1Q8CFK2 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Brf1Q8CFK2 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Brf1Q8CFK2 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC4.31□□□□□ -1.72
Brf1Q8CFK2 Gm37879-201ENSMUST00000193112 1995 ntBASIC4.31□□□□□ -1.72
Brf1Q8CFK2 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Brf1Q8CFK2 Gm25420-201ENSMUST00000104216 127 ntBASIC4.31□□□□□ -1.72
Brf1Q8CFK2 Gm24792-201ENSMUST00000104286 128 ntBASIC4.31□□□□□ -1.72
Brf1Q8CFK2 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC4.31□□□□□ -1.72
Brf1Q8CFK2 Gm14681-201ENSMUST00000118047 411 ntBASIC4.31□□□□□ -1.72
Brf1Q8CFK2 Gm26255-201ENSMUST00000122492 103 ntBASIC4.31□□□□□ -1.72
Brf1Q8CFK2 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC4.31□□□□□ -1.72
Brf1Q8CFK2 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC4.31□□□□□ -1.72
Brf1Q8CFK2 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Brf1Q8CFK2 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC4.31□□□□□ -1.72
Brf1Q8CFK2 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Brf1Q8CFK2 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC4.31□□□□□ -1.72
Brf1Q8CFK2 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Brf1Q8CFK2 Gm27332-201ENSMUST00000184893 112 ntBASIC4.31□□□□□ -1.72
Brf1Q8CFK2 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC4.31□□□□□ -1.72
Brf1Q8CFK2 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC4.31□□□□□ -1.72
Brf1Q8CFK2 Gm37455-201ENSMUST00000191993 529 ntBASIC4.31□□□□□ -1.72
Brf1Q8CFK2 Gm38053-201ENSMUST00000193938 160 ntBASIC4.31□□□□□ -1.72
Brf1Q8CFK2 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC4.31□□□□□ -1.72
Brf1Q8CFK2 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Brf1Q8CFK2 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC4.31□□□□□ -1.72
Brf1Q8CFK2 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Brf1Q8CFK2 AC107864.1-201ENSMUST00000217937 496 ntBASIC4.31□□□□□ -1.72
Brf1Q8CFK2 Gm8785-201ENSMUST00000220259 487 ntBASIC4.31□□□□□ -1.72
Brf1Q8CFK2 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC4.31□□□□□ -1.72
Brf1Q8CFK2 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Brf1Q8CFK2 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Brf1Q8CFK2 Gm24611-201ENSMUST00000083272 107 ntBASIC4.31□□□□□ -1.72
Brf1Q8CFK2 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Brf1Q8CFK2 Gm44438-201ENSMUST00000204388 3236 ntBASIC4.31□□□□□ -1.72
Brf1Q8CFK2 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
Brf1Q8CFK2 Gm38388-201ENSMUST00000195569 1430 ntBASIC4.3□□□□□ -1.72
Brf1Q8CFK2 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Brf1Q8CFK2 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Brf1Q8CFK2 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Brf1Q8CFK2 Gm42481-201ENSMUST00000196822 2178 ntBASIC4.3□□□□□ -1.72
Brf1Q8CFK2 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.3□□□□□ -1.72
Brf1Q8CFK2 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.3□□□□□ -1.72
Brf1Q8CFK2 Gm45809-201ENSMUST00000211661 3894 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 191.8 ms