Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm27903-201ENSMUST00000175482 126 ntBASIC4.03□□□□□ -1.76
Trim9Q8C7M3 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Trim9Q8C7M3 Gm28010-201ENSMUST00000179485 126 ntBASIC4.03□□□□□ -1.76
Trim9Q8C7M3 Gm11395-201ENSMUST00000181011 499 ntBASIC4.03□□□□□ -1.76
Trim9Q8C7M3 Gm27385-201ENSMUST00000184747 104 ntBASIC4.03□□□□□ -1.76
Trim9Q8C7M3 Gm19641-201ENSMUST00000188432 417 ntBASIC4.03□□□□□ -1.76
Trim9Q8C7M3 Gm29229-201ENSMUST00000188874 323 ntBASIC4.03□□□□□ -1.76
Trim9Q8C7M3 Gm5731-201ENSMUST00000190969 481 ntBASIC4.03□□□□□ -1.76
Trim9Q8C7M3 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC4.03□□□□□ -1.76
Trim9Q8C7M3 Gm38080-201ENSMUST00000194035 268 ntBASIC4.03□□□□□ -1.76
Trim9Q8C7M3 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC4.03□□□□□ -1.76
Trim9Q8C7M3 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC4.03□□□□□ -1.76
Trim9Q8C7M3 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC4.03□□□□□ -1.76
Trim9Q8C7M3 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC4.03□□□□□ -1.76
Trim9Q8C7M3 Gm45317-201ENSMUST00000210385 223 ntBASIC4.03□□□□□ -1.76
Trim9Q8C7M3 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC4.03□□□□□ -1.76
Trim9Q8C7M3 Gm2829-201ENSMUST00000213121 499 ntBASIC4.03□□□□□ -1.76
Trim9Q8C7M3 AC160134.1-201ENSMUST00000213450 551 ntBASIC4.03□□□□□ -1.76
Trim9Q8C7M3 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC4.03□□□□□ -1.76
Trim9Q8C7M3 AC132437.1-201ENSMUST00000218308 320 ntBASIC4.03□□□□□ -1.76
Trim9Q8C7M3 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC4.03□□□□□ -1.76
Trim9Q8C7M3 AC166358.7-201ENSMUST00000221132 108 ntBASIC4.03□□□□□ -1.76
Trim9Q8C7M3 AC125543.5-201ENSMUST00000222799 108 ntBASIC4.03□□□□□ -1.76
Trim9Q8C7M3 AC129308.2-201ENSMUST00000224588 789 ntBASIC4.03□□□□□ -1.76
Trim9Q8C7M3 AC147633.1-201ENSMUST00000225134 259 ntBASIC4.03□□□□□ -1.76
Trim9Q8C7M3 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Trim9Q8C7M3 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Trim9Q8C7M3 Snord42a-201ENSMUST00000082606 65 ntBASIC4.03□□□□□ -1.76
Trim9Q8C7M3 Snord14e-201ENSMUST00000082857 90 ntBASIC4.03□□□□□ -1.76
Trim9Q8C7M3 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.03□□□□□ -1.76
Trim9Q8C7M3 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Trim9Q8C7M3 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Trim9Q8C7M3 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
Trim9Q8C7M3 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
Trim9Q8C7M3 AC122887.2-201ENSMUST00000219465 1603 ntBASIC4.03□□□□□ -1.77
Trim9Q8C7M3 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trim9Q8C7M3 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
Trim9Q8C7M3 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Trim9Q8C7M3 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trim9Q8C7M3 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Trim9Q8C7M3 Gm37802-201ENSMUST00000194998 2643 ntBASIC4.02□□□□□ -1.77
Trim9Q8C7M3 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
Trim9Q8C7M3 Gm25420-201ENSMUST00000104216 127 ntBASIC4.02□□□□□ -1.77
Trim9Q8C7M3 Gm12149-201ENSMUST00000117511 654 ntBASIC4.02□□□□□ -1.77
Trim9Q8C7M3 Gm14142-201ENSMUST00000117833 296 ntBASIC4.02□□□□□ -1.77
Trim9Q8C7M3 Gm14647-201ENSMUST00000119392 680 ntBASIC4.02□□□□□ -1.77
Trim9Q8C7M3 Gm11363-201ENSMUST00000121672 548 ntBASIC4.02□□□□□ -1.77
Trim9Q8C7M3 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC4.02□□□□□ -1.77
Trim9Q8C7M3 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC4.02□□□□□ -1.77
Trim9Q8C7M3 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC4.02□□□□□ -1.77
Trim9Q8C7M3 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC4.02□□□□□ -1.77
Trim9Q8C7M3 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC4.02□□□□□ -1.77
Trim9Q8C7M3 Ear-ps12-201ENSMUST00000161720 451 ntBASIC4.02□□□□□ -1.77
Trim9Q8C7M3 Snord92-201ENSMUST00000175548 85 ntBASIC4.02□□□□□ -1.77
Trim9Q8C7M3 Gm26866-201ENSMUST00000180414 802 ntBASIC4.02□□□□□ -1.77
Trim9Q8C7M3 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC4.02□□□□□ -1.77
Trim9Q8C7M3 Gm37715-201ENSMUST00000193206 235 ntBASIC4.02□□□□□ -1.77
Trim9Q8C7M3 Gm2077-201ENSMUST00000195017 319 ntBASIC4.02□□□□□ -1.77
Trim9Q8C7M3 Gm37817-201ENSMUST00000195276 434 ntBASIC4.02□□□□□ -1.77
Trim9Q8C7M3 Igkv2-105-201ENSMUST00000196931 377 ntBASIC4.02□□□□□ -1.77
Trim9Q8C7M3 Gm44161-201ENSMUST00000203532 253 ntBASIC4.02□□□□□ -1.77
Trim9Q8C7M3 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC4.02□□□□□ -1.77
Trim9Q8C7M3 Gm45367-201ENSMUST00000210171 347 ntBASIC4.02□□□□□ -1.77
Trim9Q8C7M3 AC154358.1-201ENSMUST00000224871 218 ntBASIC4.02□□□□□ -1.77
Trim9Q8C7M3 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Trim9Q8C7M3 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC4.02□□□□□ -1.77
Trim9Q8C7M3 Gm25205-201ENSMUST00000082841 103 ntBASIC4.02□□□□□ -1.77
Trim9Q8C7M3 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Trim9Q8C7M3 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trim9Q8C7M3 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
Trim9Q8C7M3 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Trim9Q8C7M3 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trim9Q8C7M3 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Trim9Q8C7M3 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Trim9Q8C7M3 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
Trim9Q8C7M3 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Trim9Q8C7M3 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.01□□□□□ -1.77
Trim9Q8C7M3 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.01□□□□□ -1.77
Trim9Q8C7M3 Gm37626-201ENSMUST00000194332 4563 ntBASIC4.01□□□□□ -1.77
Trim9Q8C7M3 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Trim9Q8C7M3 Gm11556-201ENSMUST00000120751 288 ntBASIC4.01□□□□□ -1.77
Trim9Q8C7M3 Gm14980-201ENSMUST00000121247 736 ntBASIC4.01□□□□□ -1.77
Trim9Q8C7M3 Gm14761-201ENSMUST00000121363 262 ntBASIC4.01□□□□□ -1.77
Trim9Q8C7M3 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Trim9Q8C7M3 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC4.01□□□□□ -1.77
Trim9Q8C7M3 Gm25058-201ENSMUST00000157365 128 ntBASIC4.01□□□□□ -1.77
Trim9Q8C7M3 Gm22085-201ENSMUST00000158344 110 ntBASIC4.01□□□□□ -1.77
Trim9Q8C7M3 Gm22501-201ENSMUST00000158981 127 ntBASIC4.01□□□□□ -1.77
Trim9Q8C7M3 Gm22290-201ENSMUST00000177655 107 ntBASIC4.01□□□□□ -1.77
Trim9Q8C7M3 Gm22583-201ENSMUST00000178031 107 ntBASIC4.01□□□□□ -1.77
Trim9Q8C7M3 Gm29231-201ENSMUST00000179850 319 ntBASIC4.01□□□□□ -1.77
Trim9Q8C7M3 Gm27445-201ENSMUST00000184484 72 ntBASIC4.01□□□□□ -1.77
Trim9Q8C7M3 Mir6363-201ENSMUST00000184880 114 ntBASIC4.01□□□□□ -1.77
Trim9Q8C7M3 Gm28625-201ENSMUST00000188309 205 ntBASIC4.01□□□□□ -1.77
Trim9Q8C7M3 Gm28500-201ENSMUST00000190286 151 ntBASIC4.01□□□□□ -1.77
Trim9Q8C7M3 Gm44055-201ENSMUST00000204376 247 ntBASIC4.01□□□□□ -1.77
Trim9Q8C7M3 AC122393.3-201ENSMUST00000226343 1059 ntBASIC4.01□□□□□ -1.77
Trim9Q8C7M3 Snora31-201ENSMUST00000083213 130 ntBASIC4.01□□□□□ -1.77
Trim9Q8C7M3 Gm40020-201ENSMUST00000215677 1635 ntBASIC4.01□□□□□ -1.77
Trim9Q8C7M3 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 144.9 ms