Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm37979-201ENSMUST00000193065 712 ntBASIC2.84□□□□□ -1.95
Trim3Q9R1R2 Gm18551-201ENSMUST00000195594 642 ntBASIC2.84□□□□□ -1.95
Trim3Q9R1R2 Gm42465-201ENSMUST00000197036 492 ntBASIC2.84□□□□□ -1.95
Trim3Q9R1R2 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.84□□□□□ -1.95
Trim3Q9R1R2 Gm25203-202ENSMUST00000200458 216 ntBASIC2.84□□□□□ -1.95
Trim3Q9R1R2 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC2.84□□□□□ -1.95
Trim3Q9R1R2 Gm44520-201ENSMUST00000205447 802 ntBASIC2.84□□□□□ -1.95
Trim3Q9R1R2 Gm45226-201ENSMUST00000206602 288 ntBASIC2.84□□□□□ -1.95
Trim3Q9R1R2 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC2.84□□□□□ -1.95
Trim3Q9R1R2 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC2.84□□□□□ -1.95
Trim3Q9R1R2 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC2.84□□□□□ -1.95
Trim3Q9R1R2 AC152979.1-201ENSMUST00000218214 289 ntBASIC2.84□□□□□ -1.95
Trim3Q9R1R2 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC2.84□□□□□ -1.95
Trim3Q9R1R2 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Trim3Q9R1R2 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.84□□□□□ -1.95
Trim3Q9R1R2 AC140451.2-202ENSMUST00000226156 574 ntBASIC2.84□□□□□ -1.95
Trim3Q9R1R2 AC101945.3-201ENSMUST00000226568 153 ntBASIC2.84□□□□□ -1.95
Trim3Q9R1R2 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC2.84□□□□□ -1.95
Trim3Q9R1R2 Gm25203-201ENSMUST00000082842 215 ntBASIC2.84□□□□□ -1.95
Trim3Q9R1R2 Gm22265-201ENSMUST00000082947 116 ntBASIC2.84□□□□□ -1.95
Trim3Q9R1R2 Gm25582-201ENSMUST00000083412 110 ntBASIC2.84□□□□□ -1.95
Trim3Q9R1R2 AC152159.1-201ENSMUST00000226719 2769 ntBASIC2.84□□□□□ -1.95
Trim3Q9R1R2 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.84□□□□□ -1.96
Trim3Q9R1R2 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
Trim3Q9R1R2 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
Trim3Q9R1R2 Gm7853-201ENSMUST00000100708 478 ntBASIC2.83□□□□□ -1.96
Trim3Q9R1R2 Gm23577-201ENSMUST00000103950 110 ntBASIC2.83□□□□□ -1.96
Trim3Q9R1R2 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC2.83□□□□□ -1.96
Trim3Q9R1R2 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC2.83□□□□□ -1.96
Trim3Q9R1R2 Gm24138-201ENSMUST00000157572 114 ntBASIC2.83□□□□□ -1.96
Trim3Q9R1R2 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Trim3Q9R1R2 Gm17929-201ENSMUST00000186851 627 ntBASIC2.83□□□□□ -1.96
Trim3Q9R1R2 Gm29576-201ENSMUST00000188020 678 ntBASIC2.83□□□□□ -1.96
Trim3Q9R1R2 Gm29600-201ENSMUST00000188687 377 ntBASIC2.83□□□□□ -1.96
Trim3Q9R1R2 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
Trim3Q9R1R2 Gm28354-201ENSMUST00000190904 678 ntBASIC2.83□□□□□ -1.96
Trim3Q9R1R2 Nras-ps2-201ENSMUST00000195269 178 ntBASIC2.83□□□□□ -1.96
Trim3Q9R1R2 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC2.83□□□□□ -1.96
Trim3Q9R1R2 Gm45513-201ENSMUST00000210228 376 ntBASIC2.83□□□□□ -1.96
Trim3Q9R1R2 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.83□□□□□ -1.96
Trim3Q9R1R2 Gm7753-201ENSMUST00000221007 867 ntBASIC2.83□□□□□ -1.96
Trim3Q9R1R2 Gm9370-201ENSMUST00000222787 609 ntBASIC2.83□□□□□ -1.96
Trim3Q9R1R2 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.83□□□□□ -1.96
Trim3Q9R1R2 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Trim3Q9R1R2 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Trim3Q9R1R2 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
Trim3Q9R1R2 Gm25856-201ENSMUST00000082786 75 ntBASIC2.83□□□□□ -1.96
Trim3Q9R1R2 Mir463-201ENSMUST00000093570 75 ntBASIC2.83□□□□□ -1.96
Trim3Q9R1R2 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Trim3Q9R1R2 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Trim3Q9R1R2 Gm26002-201ENSMUST00000101915 107 ntBASIC2.82□□□□□ -1.96
Trim3Q9R1R2 Mir878-201ENSMUST00000104680 78 ntBASIC2.82□□□□□ -1.96
Trim3Q9R1R2 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC2.82□□□□□ -1.96
Trim3Q9R1R2 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC2.82□□□□□ -1.96
Trim3Q9R1R2 Gm14128-201ENSMUST00000119514 1011 ntBASIC2.82□□□□□ -1.96
Trim3Q9R1R2 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC2.82□□□□□ -1.96
Trim3Q9R1R2 Gm11582-201ENSMUST00000121041 236 ntBASIC2.82□□□□□ -1.96
Trim3Q9R1R2 Gm4916-201ENSMUST00000126139 642 ntBASIC2.82□□□□□ -1.96
Trim3Q9R1R2 Gm14562-201ENSMUST00000129885 543 ntBASIC2.82□□□□□ -1.96
Trim3Q9R1R2 Gm26277-201ENSMUST00000157097 152 ntBASIC2.82□□□□□ -1.96
Trim3Q9R1R2 Gm22187-201ENSMUST00000157819 129 ntBASIC2.82□□□□□ -1.96
Trim3Q9R1R2 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Trim3Q9R1R2 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Trim3Q9R1R2 Gm26297-201ENSMUST00000179464 132 ntBASIC2.82□□□□□ -1.96
Trim3Q9R1R2 Gm23648-201ENSMUST00000180301 107 ntBASIC2.82□□□□□ -1.96
Trim3Q9R1R2 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC2.82□□□□□ -1.96
Trim3Q9R1R2 Gm29330-201ENSMUST00000190032 699 ntBASIC2.82□□□□□ -1.96
Trim3Q9R1R2 Gm28098-201ENSMUST00000191361 699 ntBASIC2.82□□□□□ -1.96
Trim3Q9R1R2 Gm38075-201ENSMUST00000191979 920 ntBASIC2.82□□□□□ -1.96
Trim3Q9R1R2 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC2.82□□□□□ -1.96
Trim3Q9R1R2 Ighv1-40-201ENSMUST00000194231 345 ntBASIC2.82□□□□□ -1.96
Trim3Q9R1R2 Gm43224-201ENSMUST00000201567 898 ntBASIC2.82□□□□□ -1.96
Trim3Q9R1R2 Gm44223-201ENSMUST00000204854 114 ntBASIC2.82□□□□□ -1.96
Trim3Q9R1R2 Gm45439-201ENSMUST00000211723 359 ntBASIC2.82□□□□□ -1.96
Trim3Q9R1R2 Gm45860-201ENSMUST00000212700 334 ntBASIC2.82□□□□□ -1.96
Trim3Q9R1R2 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC2.82□□□□□ -1.96
Trim3Q9R1R2 AC154636.3-201ENSMUST00000221489 1214 ntBASIC2.82□□□□□ -1.96
Trim3Q9R1R2 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.82□□□□□ -1.96
Trim3Q9R1R2 AC161758.1-201ENSMUST00000226123 310 ntBASIC2.82□□□□□ -1.96
Trim3Q9R1R2 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC2.82□□□□□ -1.96
Trim3Q9R1R2 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Trim3Q9R1R2 Gm23506-201ENSMUST00000083077 107 ntBASIC2.82□□□□□ -1.96
Trim3Q9R1R2 Mir128-1-201ENSMUST00000083586 70 ntBASIC2.82□□□□□ -1.96
Trim3Q9R1R2 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Trim3Q9R1R2 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Trim3Q9R1R2 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Trim3Q9R1R2 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
Trim3Q9R1R2 AC115047.2-201ENSMUST00000214421 1848 ntBASIC2.82□□□□□ -1.96
Trim3Q9R1R2 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC2.81□□□□□ -1.96
Trim3Q9R1R2 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
Trim3Q9R1R2 Gm11819-201ENSMUST00000122192 372 ntBASIC2.81□□□□□ -1.96
Trim3Q9R1R2 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC2.81□□□□□ -1.96
Trim3Q9R1R2 Gm22961-201ENSMUST00000157964 106 ntBASIC2.81□□□□□ -1.96
Trim3Q9R1R2 Gm7582-201ENSMUST00000160831 603 ntBASIC2.81□□□□□ -1.96
Trim3Q9R1R2 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Trim3Q9R1R2 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC2.81□□□□□ -1.96
Trim3Q9R1R2 Gm2855-201ENSMUST00000166765 456 ntBASIC2.81□□□□□ -1.96
Trim3Q9R1R2 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Trim3Q9R1R2 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Trim3Q9R1R2 Gm44254-201ENSMUST00000204184 322 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 173.7 ms