Protein–RNA interactions for Protein: Q9CWY9

Rpain, RPA-interacting protein, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpainQ9CWY9 AC112935.1-201ENSMUST00000227603 250 ntBASIC4.42□□□□□ -1.7
RpainQ9CWY9 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
RpainQ9CWY9 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RpainQ9CWY9 Snora23-201ENSMUST00000082517 184 ntBASIC4.42□□□□□ -1.7
RpainQ9CWY9 Mir26a-1-201ENSMUST00000083579 90 ntBASIC4.42□□□□□ -1.7
RpainQ9CWY9 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
RpainQ9CWY9 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
RpainQ9CWY9 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RpainQ9CWY9 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RpainQ9CWY9 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
RpainQ9CWY9 Gm43320-201ENSMUST00000196047 2916 ntBASIC4.41□□□□□ -1.7
RpainQ9CWY9 Mir466h-201ENSMUST00000104748 81 ntBASIC4.41□□□□□ -1.7
RpainQ9CWY9 Gm13511-201ENSMUST00000121167 363 ntBASIC4.41□□□□□ -1.7
RpainQ9CWY9 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC4.41□□□□□ -1.7
RpainQ9CWY9 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC4.41□□□□□ -1.7
RpainQ9CWY9 Gm16569-201ENSMUST00000160526 314 ntBASIC4.41□□□□□ -1.7
RpainQ9CWY9 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC4.41□□□□□ -1.7
RpainQ9CWY9 Gm9830-201ENSMUST00000178509 357 ntBASIC4.41□□□□□ -1.7
RpainQ9CWY9 Gm22243-201ENSMUST00000178754 120 ntBASIC4.41□□□□□ -1.7
RpainQ9CWY9 Gm24464-201ENSMUST00000179697 107 ntBASIC4.41□□□□□ -1.7
RpainQ9CWY9 Mir6933-201ENSMUST00000184982 81 ntBASIC4.41□□□□□ -1.7
RpainQ9CWY9 Gm44054-201ENSMUST00000203814 372 ntBASIC4.41□□□□□ -1.7
RpainQ9CWY9 Gm18462-201ENSMUST00000208112 417 ntBASIC4.41□□□□□ -1.7
RpainQ9CWY9 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC4.41□□□□□ -1.7
RpainQ9CWY9 AC160863.1-201ENSMUST00000218412 317 ntBASIC4.41□□□□□ -1.7
RpainQ9CWY9 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC4.41□□□□□ -1.7
RpainQ9CWY9 Gm21937-201ENSMUST00000222825 218 ntBASIC4.41□□□□□ -1.7
RpainQ9CWY9 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RpainQ9CWY9 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.41□□□□□ -1.7
RpainQ9CWY9 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RpainQ9CWY9 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RpainQ9CWY9 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
RpainQ9CWY9 CT010444.1-201ENSMUST00000219963 3845 ntBASIC4.41□□□□□ -1.7
RpainQ9CWY9 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
RpainQ9CWY9 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
RpainQ9CWY9 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
RpainQ9CWY9 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC4.4□□□□□ -1.7
RpainQ9CWY9 Gm45697-201ENSMUST00000212893 2876 ntBASIC4.4□□□□□ -1.7
RpainQ9CWY9 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RpainQ9CWY9 Gm37887-201ENSMUST00000192752 2716 ntBASIC4.4□□□□□ -1.7
RpainQ9CWY9 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
RpainQ9CWY9 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
RpainQ9CWY9 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
RpainQ9CWY9 Snord66-201ENSMUST00000104051 75 ntBASIC4.4□□□□□ -1.71
RpainQ9CWY9 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC4.4□□□□□ -1.71
RpainQ9CWY9 Gm14142-201ENSMUST00000117833 296 ntBASIC4.4□□□□□ -1.71
RpainQ9CWY9 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.4□□□□□ -1.71
RpainQ9CWY9 Gm12771-201ENSMUST00000120246 135 ntBASIC4.4□□□□□ -1.71
RpainQ9CWY9 Gm13677-201ENSMUST00000120739 595 ntBASIC4.4□□□□□ -1.71
RpainQ9CWY9 Gm5123-201ENSMUST00000121905 837 ntBASIC4.4□□□□□ -1.71
RpainQ9CWY9 Gm22718-201ENSMUST00000122701 315 ntBASIC4.4□□□□□ -1.71
RpainQ9CWY9 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RpainQ9CWY9 Gm5755-201ENSMUST00000152394 837 ntBASIC4.4□□□□□ -1.71
RpainQ9CWY9 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RpainQ9CWY9 Gm22219-201ENSMUST00000157562 319 ntBASIC4.4□□□□□ -1.71
RpainQ9CWY9 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC4.4□□□□□ -1.71
RpainQ9CWY9 Gm23638-201ENSMUST00000175073 126 ntBASIC4.4□□□□□ -1.71
RpainQ9CWY9 Gm23158-201ENSMUST00000175076 126 ntBASIC4.4□□□□□ -1.71
RpainQ9CWY9 Gm22907-201ENSMUST00000175198 126 ntBASIC4.4□□□□□ -1.71
RpainQ9CWY9 Gm22625-201ENSMUST00000175382 126 ntBASIC4.4□□□□□ -1.71
RpainQ9CWY9 Gm22875-201ENSMUST00000175449 126 ntBASIC4.4□□□□□ -1.71
RpainQ9CWY9 Gm25197-201ENSMUST00000175516 126 ntBASIC4.4□□□□□ -1.71
RpainQ9CWY9 Gm27857-201ENSMUST00000176930 126 ntBASIC4.4□□□□□ -1.71
RpainQ9CWY9 Gm26268-201ENSMUST00000177685 126 ntBASIC4.4□□□□□ -1.71
RpainQ9CWY9 Gm23681-201ENSMUST00000178821 126 ntBASIC4.4□□□□□ -1.71
RpainQ9CWY9 Gm27940-201ENSMUST00000184449 98 ntBASIC4.4□□□□□ -1.71
RpainQ9CWY9 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC4.4□□□□□ -1.71
RpainQ9CWY9 Gm17951-201ENSMUST00000198536 496 ntBASIC4.4□□□□□ -1.71
RpainQ9CWY9 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RpainQ9CWY9 Gm19726-201ENSMUST00000205008 240 ntBASIC4.4□□□□□ -1.71
RpainQ9CWY9 Gm5358-201ENSMUST00000212814 353 ntBASIC4.4□□□□□ -1.71
RpainQ9CWY9 AC099578.1-201ENSMUST00000220147 435 ntBASIC4.4□□□□□ -1.71
RpainQ9CWY9 AC154305.1-201ENSMUST00000224443 450 ntBASIC4.4□□□□□ -1.71
RpainQ9CWY9 Gm10237-201ENSMUST00000078393 273 ntBASIC4.4□□□□□ -1.71
RpainQ9CWY9 Gm24457-201ENSMUST00000083196 105 ntBASIC4.4□□□□□ -1.71
RpainQ9CWY9 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
RpainQ9CWY9 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RpainQ9CWY9 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC4.4□□□□□ -1.71
RpainQ9CWY9 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
RpainQ9CWY9 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RpainQ9CWY9 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RpainQ9CWY9 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RpainQ9CWY9 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RpainQ9CWY9 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RpainQ9CWY9 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RpainQ9CWY9 Gm14622-201ENSMUST00000117117 468 ntBASIC4.39□□□□□ -1.71
RpainQ9CWY9 Gm14566-201ENSMUST00000118915 321 ntBASIC4.39□□□□□ -1.71
RpainQ9CWY9 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC4.39□□□□□ -1.71
RpainQ9CWY9 Gm9003-201ENSMUST00000121810 482 ntBASIC4.39□□□□□ -1.71
RpainQ9CWY9 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.39□□□□□ -1.71
RpainQ9CWY9 Gm25150-201ENSMUST00000157121 60 ntBASIC4.39□□□□□ -1.71
RpainQ9CWY9 Gm24240-201ENSMUST00000157785 135 ntBASIC4.39□□□□□ -1.71
RpainQ9CWY9 Gm24584-201ENSMUST00000157972 107 ntBASIC4.39□□□□□ -1.71
RpainQ9CWY9 Gm25606-201ENSMUST00000158363 95 ntBASIC4.39□□□□□ -1.71
RpainQ9CWY9 Gm26171-201ENSMUST00000158422 131 ntBASIC4.39□□□□□ -1.71
RpainQ9CWY9 Gm22286-201ENSMUST00000179708 107 ntBASIC4.39□□□□□ -1.71
RpainQ9CWY9 Gm26960-201ENSMUST00000182263 412 ntBASIC4.39□□□□□ -1.71
RpainQ9CWY9 Mir6414-201ENSMUST00000183685 82 ntBASIC4.39□□□□□ -1.71
RpainQ9CWY9 Gm19637-201ENSMUST00000185933 579 ntBASIC4.39□□□□□ -1.71
RpainQ9CWY9 Gm29192-201ENSMUST00000190942 377 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 136.7 ms