Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Brf1Q8CFK2 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Brf1Q8CFK2 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Brf1Q8CFK2 Gm15026-201ENSMUST00000119219 458 ntBASIC4.36□□□□□ -1.71
Brf1Q8CFK2 Gm13475-201ENSMUST00000119290 234 ntBASIC4.36□□□□□ -1.71
Brf1Q8CFK2 Gm12806-201ENSMUST00000119384 268 ntBASIC4.36□□□□□ -1.71
Brf1Q8CFK2 Gm9043-201ENSMUST00000119677 314 ntBASIC4.36□□□□□ -1.71
Brf1Q8CFK2 Gm12640-201ENSMUST00000120097 310 ntBASIC4.36□□□□□ -1.71
Brf1Q8CFK2 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Brf1Q8CFK2 Gm14678-201ENSMUST00000121396 482 ntBASIC4.36□□□□□ -1.71
Brf1Q8CFK2 Gm24961-201ENSMUST00000157918 184 ntBASIC4.36□□□□□ -1.71
Brf1Q8CFK2 Gm24757-201ENSMUST00000176987 371 ntBASIC4.36□□□□□ -1.71
Brf1Q8CFK2 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC4.36□□□□□ -1.71
Brf1Q8CFK2 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Brf1Q8CFK2 Gm43472-201ENSMUST00000200175 154 ntBASIC4.36□□□□□ -1.71
Brf1Q8CFK2 Gm45387-201ENSMUST00000209792 632 ntBASIC4.36□□□□□ -1.71
Brf1Q8CFK2 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC4.36□□□□□ -1.71
Brf1Q8CFK2 Gm45327-201ENSMUST00000211612 565 ntBASIC4.36□□□□□ -1.71
Brf1Q8CFK2 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
Brf1Q8CFK2 Gm7751-201ENSMUST00000212868 709 ntBASIC4.36□□□□□ -1.71
Brf1Q8CFK2 AC112935.1-201ENSMUST00000227603 250 ntBASIC4.36□□□□□ -1.71
Brf1Q8CFK2 AC163646.2-201ENSMUST00000227962 141 ntBASIC4.36□□□□□ -1.71
Brf1Q8CFK2 Gm26449-201ENSMUST00000082452 104 ntBASIC4.36□□□□□ -1.71
Brf1Q8CFK2 Gm23345-201ENSMUST00000083817 150 ntBASIC4.36□□□□□ -1.71
Brf1Q8CFK2 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Brf1Q8CFK2 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Brf1Q8CFK2 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Brf1Q8CFK2 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Brf1Q8CFK2 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Brf1Q8CFK2 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
Brf1Q8CFK2 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Brf1Q8CFK2 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Brf1Q8CFK2 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Brf1Q8CFK2 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.35□□□□□ -1.71
Brf1Q8CFK2 Gm44435-201ENSMUST00000204379 4119 ntBASIC4.35□□□□□ -1.71
Brf1Q8CFK2 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Brf1Q8CFK2 Gm24889-201ENSMUST00000104388 132 ntBASIC4.35□□□□□ -1.71
Brf1Q8CFK2 Gm11704-201ENSMUST00000120031 214 ntBASIC4.35□□□□□ -1.71
Brf1Q8CFK2 Gm11606-201ENSMUST00000120706 617 ntBASIC4.35□□□□□ -1.71
Brf1Q8CFK2 Gm7308-201ENSMUST00000121087 447 ntBASIC4.35□□□□□ -1.71
Brf1Q8CFK2 Gm12578-201ENSMUST00000121244 417 ntBASIC4.35□□□□□ -1.71
Brf1Q8CFK2 Mir1898-201ENSMUST00000122643 83 ntBASIC4.35□□□□□ -1.71
Brf1Q8CFK2 Gm25292-201ENSMUST00000122797 322 ntBASIC4.35□□□□□ -1.71
Brf1Q8CFK2 Gm13092-201ENSMUST00000136346 260 ntBASIC4.35□□□□□ -1.71
Brf1Q8CFK2 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Brf1Q8CFK2 Gm23602-201ENSMUST00000157258 132 ntBASIC4.35□□□□□ -1.71
Brf1Q8CFK2 Gm22310-201ENSMUST00000157509 116 ntBASIC4.35□□□□□ -1.71
Brf1Q8CFK2 Gm23016-201ENSMUST00000158431 62 ntBASIC4.35□□□□□ -1.71
Brf1Q8CFK2 Gm22633-201ENSMUST00000179834 107 ntBASIC4.35□□□□□ -1.71
Brf1Q8CFK2 Gm27490-201ENSMUST00000184754 128 ntBASIC4.35□□□□□ -1.71
Brf1Q8CFK2 Igkv15-97-201ENSMUST00000197637 339 ntBASIC4.35□□□□□ -1.71
Brf1Q8CFK2 Gm5322-201ENSMUST00000206142 699 ntBASIC4.35□□□□□ -1.71
Brf1Q8CFK2 Gm45312-201ENSMUST00000210566 311 ntBASIC4.35□□□□□ -1.71
Brf1Q8CFK2 Gm4036-201ENSMUST00000220842 626 ntBASIC4.35□□□□□ -1.71
Brf1Q8CFK2 Gm20102-201ENSMUST00000222445 220 ntBASIC4.35□□□□□ -1.71
Brf1Q8CFK2 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Brf1Q8CFK2 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Brf1Q8CFK2 Gm25512-201ENSMUST00000083863 107 ntBASIC4.35□□□□□ -1.71
Brf1Q8CFK2 Gm3584-201ENSMUST00000173822 2565 ntBASIC4.35□□□□□ -1.71
Brf1Q8CFK2 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Brf1Q8CFK2 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Brf1Q8CFK2 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Brf1Q8CFK2 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Brf1Q8CFK2 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC4.34□□□□□ -1.71
Brf1Q8CFK2 Gm14875-201ENSMUST00000120881 319 ntBASIC4.34□□□□□ -1.71
Brf1Q8CFK2 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Brf1Q8CFK2 Gm24240-201ENSMUST00000157785 135 ntBASIC4.34□□□□□ -1.71
Brf1Q8CFK2 Gm25606-201ENSMUST00000158363 95 ntBASIC4.34□□□□□ -1.71
Brf1Q8CFK2 Gm4222-201ENSMUST00000165784 470 ntBASIC4.34□□□□□ -1.71
Brf1Q8CFK2 Gm20543-201ENSMUST00000174200 726 ntBASIC4.34□□□□□ -1.71
Brf1Q8CFK2 Gm24418-201ENSMUST00000177597 79 ntBASIC4.34□□□□□ -1.71
Brf1Q8CFK2 Gm24639-201ENSMUST00000178518 79 ntBASIC4.34□□□□□ -1.71
Brf1Q8CFK2 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Brf1Q8CFK2 Gm23076-201ENSMUST00000179082 79 ntBASIC4.34□□□□□ -1.71
Brf1Q8CFK2 Gm25077-201ENSMUST00000179157 79 ntBASIC4.34□□□□□ -1.71
Brf1Q8CFK2 Gm21171-201ENSMUST00000180048 673 ntBASIC4.34□□□□□ -1.71
Brf1Q8CFK2 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Brf1Q8CFK2 Gm28623-201ENSMUST00000187219 192 ntBASIC4.34□□□□□ -1.71
Brf1Q8CFK2 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Brf1Q8CFK2 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC4.34□□□□□ -1.71
Brf1Q8CFK2 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC4.34□□□□□ -1.71
Brf1Q8CFK2 Gm44076-201ENSMUST00000203072 520 ntBASIC4.34□□□□□ -1.71
Brf1Q8CFK2 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC4.34□□□□□ -1.71
Brf1Q8CFK2 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC4.34□□□□□ -1.71
Brf1Q8CFK2 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC4.34□□□□□ -1.71
Brf1Q8CFK2 AC113031.5-201ENSMUST00000227116 606 ntBASIC4.34□□□□□ -1.71
Brf1Q8CFK2 Gm25480-201ENSMUST00000083217 133 ntBASIC4.34□□□□□ -1.71
Brf1Q8CFK2 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
Brf1Q8CFK2 Gm45264-201ENSMUST00000210090 3995 ntBASIC4.34□□□□□ -1.71
Brf1Q8CFK2 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Brf1Q8CFK2 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Brf1Q8CFK2 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.72
Brf1Q8CFK2 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Brf1Q8CFK2 Gm37387-201ENSMUST00000192201 1806 ntBASIC4.33□□□□□ -1.72
Brf1Q8CFK2 Gm8217-201ENSMUST00000119136 465 ntBASIC4.33□□□□□ -1.72
Brf1Q8CFK2 Gm14647-201ENSMUST00000119392 680 ntBASIC4.33□□□□□ -1.72
Brf1Q8CFK2 Gm5123-201ENSMUST00000121905 837 ntBASIC4.33□□□□□ -1.72
Brf1Q8CFK2 Gm11229-201ENSMUST00000121993 437 ntBASIC4.33□□□□□ -1.72
Brf1Q8CFK2 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Brf1Q8CFK2 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC4.33□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 130.9 ms