Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 AC134537.2-201ENSMUST00000217770 575 ntBASIC4.81□□□□□ -1.64
Ubp1Q811S7 AC153961.2-201ENSMUST00000218877 164 ntBASIC4.81□□□□□ -1.64
Ubp1Q811S7 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ubp1Q811S7 Gm43281-201ENSMUST00000202522 2704 ntBASIC4.81□□□□□ -1.64
Ubp1Q811S7 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Ubp1Q811S7 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Ubp1Q811S7 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ubp1Q811S7 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ubp1Q811S7 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ubp1Q811S7 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ubp1Q811S7 Dbpht2-202ENSMUST00000221311 5341 ntBASIC4.81□□□□□ -1.64
Ubp1Q811S7 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ubp1Q811S7 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ubp1Q811S7 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ubp1Q811S7 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ubp1Q811S7 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ubp1Q811S7 Gm44230-201ENSMUST00000203032 3550 ntBASIC4.8□□□□□ -1.64
Ubp1Q811S7 Gm15026-201ENSMUST00000119219 458 ntBASIC4.8□□□□□ -1.64
Ubp1Q811S7 Gm12042-201ENSMUST00000120479 301 ntBASIC4.8□□□□□ -1.64
Ubp1Q811S7 Gm22343-201ENSMUST00000122648 286 ntBASIC4.8□□□□□ -1.64
Ubp1Q811S7 n-R5s216-201ENSMUST00000122755 112 ntBASIC4.8□□□□□ -1.64
Ubp1Q811S7 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC4.8□□□□□ -1.64
Ubp1Q811S7 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC4.8□□□□□ -1.64
Ubp1Q811S7 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC4.8□□□□□ -1.64
Ubp1Q811S7 Gm17775-201ENSMUST00000198542 258 ntBASIC4.8□□□□□ -1.64
Ubp1Q811S7 Gm44261-201ENSMUST00000203337 209 ntBASIC4.8□□□□□ -1.64
Ubp1Q811S7 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC4.8□□□□□ -1.64
Ubp1Q811S7 Gm44030-201ENSMUST00000204865 432 ntBASIC4.8□□□□□ -1.64
Ubp1Q811S7 Gm44977-201ENSMUST00000205283 420 ntBASIC4.8□□□□□ -1.64
Ubp1Q811S7 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC4.8□□□□□ -1.64
Ubp1Q811S7 Gm45273-201ENSMUST00000211559 281 ntBASIC4.8□□□□□ -1.64
Ubp1Q811S7 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC4.8□□□□□ -1.64
Ubp1Q811S7 CT025525.4-201ENSMUST00000227728 277 ntBASIC4.8□□□□□ -1.64
Ubp1Q811S7 Gm24166-201ENSMUST00000082724 135 ntBASIC4.8□□□□□ -1.64
Ubp1Q811S7 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
Ubp1Q811S7 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.8□□□□□ -1.64
Ubp1Q811S7 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ubp1Q811S7 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC4.8□□□□□ -1.64
Ubp1Q811S7 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC4.79□□□□□ -1.64
Ubp1Q811S7 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ubp1Q811S7 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ubp1Q811S7 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ubp1Q811S7 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ubp1Q811S7 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ubp1Q811S7 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ubp1Q811S7 Gm8145-201ENSMUST00000118220 745 ntBASIC4.79□□□□□ -1.64
Ubp1Q811S7 Gm14810-201ENSMUST00000121628 486 ntBASIC4.79□□□□□ -1.64
Ubp1Q811S7 Gm15022-201ENSMUST00000122074 746 ntBASIC4.79□□□□□ -1.64
Ubp1Q811S7 Gm24630-201ENSMUST00000122768 106 ntBASIC4.79□□□□□ -1.64
Ubp1Q811S7 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Ubp1Q811S7 Gm25384-201ENSMUST00000157807 105 ntBASIC4.79□□□□□ -1.64
Ubp1Q811S7 Gm26490-201ENSMUST00000157879 140 ntBASIC4.79□□□□□ -1.64
Ubp1Q811S7 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ubp1Q811S7 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ubp1Q811S7 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC4.79□□□□□ -1.64
Ubp1Q811S7 Gm20257-202ENSMUST00000188643 130 ntBASIC4.79□□□□□ -1.64
Ubp1Q811S7 Gm42579-201ENSMUST00000200512 734 ntBASIC4.79□□□□□ -1.64
Ubp1Q811S7 Gm44473-201ENSMUST00000204039 152 ntBASIC4.79□□□□□ -1.64
Ubp1Q811S7 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC4.79□□□□□ -1.64
Ubp1Q811S7 AC173482.4-201ENSMUST00000225096 348 ntBASIC4.79□□□□□ -1.64
Ubp1Q811S7 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ubp1Q811S7 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ubp1Q811S7 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ubp1Q811S7 Gm42559-201ENSMUST00000201811 3532 ntBASIC4.79□□□□□ -1.64
Ubp1Q811S7 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ubp1Q811S7 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC4.79□□□□□ -1.64
Ubp1Q811S7 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ubp1Q811S7 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC4.79□□□□□ -1.64
Ubp1Q811S7 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ubp1Q811S7 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Ubp1Q811S7 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ubp1Q811S7 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Ubp1Q811S7 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Ubp1Q811S7 Gm15902-202ENSMUST00000219623 3477 ntBASIC4.78□□□□□ -1.64
Ubp1Q811S7 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ubp1Q811S7 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Ubp1Q811S7 Mir297a-2-201ENSMUST00000103795 90 ntBASIC4.78□□□□□ -1.64
Ubp1Q811S7 Gm25096-201ENSMUST00000104043 129 ntBASIC4.78□□□□□ -1.64
Ubp1Q811S7 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Ubp1Q811S7 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC4.78□□□□□ -1.64
Ubp1Q811S7 Gm11196-201ENSMUST00000119052 395 ntBASIC4.78□□□□□ -1.64
Ubp1Q811S7 Gm14119-201ENSMUST00000119511 235 ntBASIC4.78□□□□□ -1.64
Ubp1Q811S7 n-R5s87-201ENSMUST00000122752 116 ntBASIC4.78□□□□□ -1.64
Ubp1Q811S7 Gm23956-201ENSMUST00000157211 119 ntBASIC4.78□□□□□ -1.64
Ubp1Q811S7 Gm24931-201ENSMUST00000158324 107 ntBASIC4.78□□□□□ -1.64
Ubp1Q811S7 Gm24348-201ENSMUST00000158710 130 ntBASIC4.78□□□□□ -1.64
Ubp1Q811S7 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Ubp1Q811S7 Gm24949-201ENSMUST00000183609 215 ntBASIC4.78□□□□□ -1.64
Ubp1Q811S7 Gm37881-201ENSMUST00000193001 421 ntBASIC4.78□□□□□ -1.64
Ubp1Q811S7 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC4.78□□□□□ -1.64
Ubp1Q811S7 AC164567.4-201ENSMUST00000219708 483 ntBASIC4.78□□□□□ -1.64
Ubp1Q811S7 Ear-ps9-202ENSMUST00000226796 245 ntBASIC4.78□□□□□ -1.64
Ubp1Q811S7 Gm25134-201ENSMUST00000082646 160 ntBASIC4.78□□□□□ -1.64
Ubp1Q811S7 Gm23042-201ENSMUST00000083866 101 ntBASIC4.78□□□□□ -1.64
Ubp1Q811S7 Gm25821-201ENSMUST00000093657 133 ntBASIC4.78□□□□□ -1.64
Ubp1Q811S7 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ubp1Q811S7 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC4.78□□□□□ -1.64
Ubp1Q811S7 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Ubp1Q811S7 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ubp1Q811S7 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 152.2 ms