Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm38076-201ENSMUST00000193889 450 ntBASIC3.3□□□□□ -1.88
Trim58Q5NCC9 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC3.3□□□□□ -1.88
Trim58Q5NCC9 Gm35212-201ENSMUST00000196672 606 ntBASIC3.3□□□□□ -1.88
Trim58Q5NCC9 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC3.3□□□□□ -1.88
Trim58Q5NCC9 AC152951.1-201ENSMUST00000218907 266 ntBASIC3.3□□□□□ -1.88
Trim58Q5NCC9 Gm7422-201ENSMUST00000220115 640 ntBASIC3.3□□□□□ -1.88
Trim58Q5NCC9 AC165415.1-201ENSMUST00000228924 273 ntBASIC3.3□□□□□ -1.88
Trim58Q5NCC9 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Trim58Q5NCC9 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trim58Q5NCC9 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC3.29□□□□□ -1.88
Trim58Q5NCC9 Mir208b-201ENSMUST00000104735 77 ntBASIC3.29□□□□□ -1.88
Trim58Q5NCC9 Gm22072-201ENSMUST00000116850 121 ntBASIC3.29□□□□□ -1.88
Trim58Q5NCC9 Gm16431-201ENSMUST00000117454 431 ntBASIC3.29□□□□□ -1.88
Trim58Q5NCC9 Gm14899-201ENSMUST00000118673 548 ntBASIC3.29□□□□□ -1.88
Trim58Q5NCC9 Gm6591-201ENSMUST00000121063 434 ntBASIC3.29□□□□□ -1.88
Trim58Q5NCC9 Gm12412-201ENSMUST00000121867 328 ntBASIC3.29□□□□□ -1.88
Trim58Q5NCC9 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC3.29□□□□□ -1.88
Trim58Q5NCC9 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC3.29□□□□□ -1.88
Trim58Q5NCC9 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC3.29□□□□□ -1.88
Trim58Q5NCC9 Gm26271-201ENSMUST00000158349 104 ntBASIC3.29□□□□□ -1.88
Trim58Q5NCC9 Gm8338-201ENSMUST00000163928 363 ntBASIC3.29□□□□□ -1.88
Trim58Q5NCC9 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC3.29□□□□□ -1.88
Trim58Q5NCC9 Gm23268-201ENSMUST00000175494 78 ntBASIC3.29□□□□□ -1.88
Trim58Q5NCC9 Gm27233-201ENSMUST00000184030 307 ntBASIC3.29□□□□□ -1.88
Trim58Q5NCC9 Gm6445-201ENSMUST00000189515 1112 ntBASIC3.29□□□□□ -1.88
Trim58Q5NCC9 Gm19418-201ENSMUST00000197436 580 ntBASIC3.29□□□□□ -1.88
Trim58Q5NCC9 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Trim58Q5NCC9 Igkv11-118-201ENSMUST00000199448 346 ntBASIC3.29□□□□□ -1.88
Trim58Q5NCC9 Gm44348-201ENSMUST00000200165 122 ntBASIC3.29□□□□□ -1.88
Trim58Q5NCC9 Gm44092-201ENSMUST00000204470 258 ntBASIC3.29□□□□□ -1.88
Trim58Q5NCC9 Gm45678-201ENSMUST00000210509 295 ntBASIC3.29□□□□□ -1.88
Trim58Q5NCC9 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trim58Q5NCC9 Gm45530-201ENSMUST00000211658 225 ntBASIC3.29□□□□□ -1.88
Trim58Q5NCC9 Gm18252-203ENSMUST00000215855 757 ntBASIC3.29□□□□□ -1.88
Trim58Q5NCC9 AC156952.1-201ENSMUST00000220361 793 ntBASIC3.29□□□□□ -1.88
Trim58Q5NCC9 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC3.29□□□□□ -1.88
Trim58Q5NCC9 AC153662.1-201ENSMUST00000222220 270 ntBASIC3.29□□□□□ -1.88
Trim58Q5NCC9 AC173481.1-201ENSMUST00000223351 270 ntBASIC3.29□□□□□ -1.88
Trim58Q5NCC9 AC115289.1-201ENSMUST00000224915 522 ntBASIC3.29□□□□□ -1.88
Trim58Q5NCC9 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trim58Q5NCC9 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Trim58Q5NCC9 Gm16436-201ENSMUST00000121510 1607 ntBASIC3.29□□□□□ -1.88
Trim58Q5NCC9 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
Trim58Q5NCC9 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trim58Q5NCC9 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trim58Q5NCC9 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trim58Q5NCC9 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Trim58Q5NCC9 AC117199.1-201ENSMUST00000219940 3132 ntBASIC3.28□□□□□ -1.88
Trim58Q5NCC9 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.28□□□□□ -1.88
Trim58Q5NCC9 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Trim58Q5NCC9 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Trim58Q5NCC9 Mir92-1-201ENSMUST00000102108 80 ntBASIC3.28□□□□□ -1.88
Trim58Q5NCC9 Gm12492-201ENSMUST00000117665 564 ntBASIC3.28□□□□□ -1.88
Trim58Q5NCC9 Gm14358-201ENSMUST00000118458 403 ntBASIC3.28□□□□□ -1.88
Trim58Q5NCC9 Gm7429-201ENSMUST00000118664 348 ntBASIC3.28□□□□□ -1.88
Trim58Q5NCC9 Gm12213-201ENSMUST00000119924 353 ntBASIC3.28□□□□□ -1.88
Trim58Q5NCC9 Gm13210-201ENSMUST00000121483 273 ntBASIC3.28□□□□□ -1.88
Trim58Q5NCC9 Gm15065-201ENSMUST00000121699 273 ntBASIC3.28□□□□□ -1.88
Trim58Q5NCC9 Gm11358-201ENSMUST00000122310 373 ntBASIC3.28□□□□□ -1.88
Trim58Q5NCC9 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC3.28□□□□□ -1.88
Trim58Q5NCC9 Gm23668-201ENSMUST00000157465 111 ntBASIC3.28□□□□□ -1.88
Trim58Q5NCC9 Gm24436-201ENSMUST00000157889 302 ntBASIC3.28□□□□□ -1.88
Trim58Q5NCC9 Gm27608-201ENSMUST00000184822 162 ntBASIC3.28□□□□□ -1.88
Trim58Q5NCC9 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Trim58Q5NCC9 Gm17929-201ENSMUST00000186851 627 ntBASIC3.28□□□□□ -1.88
Trim58Q5NCC9 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Trim58Q5NCC9 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Trim58Q5NCC9 Gm20811-201ENSMUST00000190500 553 ntBASIC3.28□□□□□ -1.88
Trim58Q5NCC9 Gm36966-201ENSMUST00000192217 413 ntBASIC3.28□□□□□ -1.88
Trim58Q5NCC9 Gm18691-201ENSMUST00000203593 872 ntBASIC3.28□□□□□ -1.88
Trim58Q5NCC9 Gm19253-201ENSMUST00000204279 307 ntBASIC3.28□□□□□ -1.88
Trim58Q5NCC9 AC124542.1-201ENSMUST00000205588 908 ntBASIC3.28□□□□□ -1.88
Trim58Q5NCC9 Gm7540-201ENSMUST00000219764 926 ntBASIC3.28□□□□□ -1.88
Trim58Q5NCC9 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC3.28□□□□□ -1.88
Trim58Q5NCC9 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Trim58Q5NCC9 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Trim58Q5NCC9 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.28□□□□□ -1.88
Trim58Q5NCC9 AC158521.1-201ENSMUST00000225295 660 ntBASIC3.28□□□□□ -1.88
Trim58Q5NCC9 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Trim58Q5NCC9 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Trim58Q5NCC9 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Trim58Q5NCC9 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Trim58Q5NCC9 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC3.28□□□□□ -1.89
Trim58Q5NCC9 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC3.28□□□□□ -1.89
Trim58Q5NCC9 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Trim58Q5NCC9 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Trim58Q5NCC9 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Trim58Q5NCC9 Mir190b-201ENSMUST00000104803 80 ntBASIC3.27□□□□□ -1.89
Trim58Q5NCC9 Gm7327-201ENSMUST00000120925 652 ntBASIC3.27□□□□□ -1.89
Trim58Q5NCC9 Gm14651-201ENSMUST00000147192 442 ntBASIC3.27□□□□□ -1.89
Trim58Q5NCC9 Gm23600-201ENSMUST00000157260 71 ntBASIC3.27□□□□□ -1.89
Trim58Q5NCC9 Gm25334-201ENSMUST00000158036 110 ntBASIC3.27□□□□□ -1.89
Trim58Q5NCC9 Gm23059-201ENSMUST00000158978 107 ntBASIC3.27□□□□□ -1.89
Trim58Q5NCC9 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Trim58Q5NCC9 Gm22853-201ENSMUST00000174974 131 ntBASIC3.27□□□□□ -1.89
Trim58Q5NCC9 Gm18417-201ENSMUST00000176564 648 ntBASIC3.27□□□□□ -1.89
Trim58Q5NCC9 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Trim58Q5NCC9 Gm27861-201ENSMUST00000183920 214 ntBASIC3.27□□□□□ -1.89
Trim58Q5NCC9 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC3.27□□□□□ -1.89
Trim58Q5NCC9 Mir6363-201ENSMUST00000184880 114 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 217.6 ms