Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm28534-201ENSMUST00000187744 676 ntBASIC2.86□□□□□ -1.95
Trim3Q9R1R2 Ighv1-41-201ENSMUST00000194414 329 ntBASIC2.86□□□□□ -1.95
Trim3Q9R1R2 Gm43004-201ENSMUST00000201872 703 ntBASIC2.86□□□□□ -1.95
Trim3Q9R1R2 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Trim3Q9R1R2 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC2.86□□□□□ -1.95
Trim3Q9R1R2 AC153924.1-201ENSMUST00000220117 312 ntBASIC2.86□□□□□ -1.95
Trim3Q9R1R2 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.86□□□□□ -1.95
Trim3Q9R1R2 AC107453.2-201ENSMUST00000227714 655 ntBASIC2.86□□□□□ -1.95
Trim3Q9R1R2 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Trim3Q9R1R2 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC2.86□□□□□ -1.95
Trim3Q9R1R2 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Trim3Q9R1R2 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC2.86□□□□□ -1.95
Trim3Q9R1R2 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Trim3Q9R1R2 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
Trim3Q9R1R2 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Trim3Q9R1R2 Gm38083-201ENSMUST00000194758 3498 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Mir883a-201ENSMUST00000104824 76 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm12268-201ENSMUST00000118398 442 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm7308-201ENSMUST00000121087 447 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm12706-201ENSMUST00000121588 698 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm22225-201ENSMUST00000157358 278 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm2930-201ENSMUST00000170403 474 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm5967-201ENSMUST00000172723 494 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm21842-201ENSMUST00000177552 498 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm21626-201ENSMUST00000177791 498 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm21562-201ENSMUST00000177888 498 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm21539-201ENSMUST00000177925 498 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm17522-201ENSMUST00000178144 498 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm21599-201ENSMUST00000178249 498 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm21914-201ENSMUST00000178452 498 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm21723-201ENSMUST00000178692 498 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm21916-201ENSMUST00000178771 498 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm21801-201ENSMUST00000178865 498 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm21633-201ENSMUST00000178941 498 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm21821-201ENSMUST00000179646 498 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm21588-201ENSMUST00000180074 498 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm21780-201ENSMUST00000180128 498 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm21572-201ENSMUST00000180134 498 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm21529-201ENSMUST00000180175 498 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm7870-201ENSMUST00000184467 616 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm29370-202ENSMUST00000187476 499 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm19224-201ENSMUST00000190477 793 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Ighv3-7-201ENSMUST00000193370 348 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm37732-201ENSMUST00000194377 316 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm43541-201ENSMUST00000197208 581 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm44061-201ENSMUST00000203962 1195 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm44050-201ENSMUST00000204263 527 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm44830-201ENSMUST00000207667 584 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Trim3Q9R1R2 AC157017.2-201ENSMUST00000218354 777 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm19540-201ENSMUST00000221843 810 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 AC127371.1-202ENSMUST00000228923 306 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm4017-201ENSMUST00000084813 338 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Trim3Q9R1R2 Gm3584-201ENSMUST00000173822 2565 ntBASIC2.84□□□□□ -1.95
Trim3Q9R1R2 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Trim3Q9R1R2 Gm25308-201ENSMUST00000104171 158 ntBASIC2.84□□□□□ -1.95
Trim3Q9R1R2 Gm22023-201ENSMUST00000104354 130 ntBASIC2.84□□□□□ -1.95
Trim3Q9R1R2 Gm13046-201ENSMUST00000117391 501 ntBASIC2.84□□□□□ -1.95
Trim3Q9R1R2 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Trim3Q9R1R2 Gm13239-201ENSMUST00000119920 637 ntBASIC2.84□□□□□ -1.95
Trim3Q9R1R2 Gm14915-201ENSMUST00000120747 204 ntBASIC2.84□□□□□ -1.95
Trim3Q9R1R2 Gm14101-201ENSMUST00000121502 473 ntBASIC2.84□□□□□ -1.95
Trim3Q9R1R2 Gm22957-201ENSMUST00000122511 123 ntBASIC2.84□□□□□ -1.95
Trim3Q9R1R2 Gm23111-201ENSMUST00000122652 105 ntBASIC2.84□□□□□ -1.95
Trim3Q9R1R2 Gm14389-201ENSMUST00000140453 241 ntBASIC2.84□□□□□ -1.95
Trim3Q9R1R2 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Trim3Q9R1R2 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.84□□□□□ -1.95
Trim3Q9R1R2 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC2.84□□□□□ -1.95
Trim3Q9R1R2 Gm29602-201ENSMUST00000186887 442 ntBASIC2.84□□□□□ -1.95
Trim3Q9R1R2 Gm29045-201ENSMUST00000187278 698 ntBASIC2.84□□□□□ -1.95
Trim3Q9R1R2 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC2.84□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 149.8 ms