Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Ubp1Q811S7 Gm18127-201ENSMUST00000208479 725 ntBASIC4.84□□□□□ -1.63
Ubp1Q811S7 AC091783.5-201ENSMUST00000224928 671 ntBASIC4.84□□□□□ -1.63
Ubp1Q811S7 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
Ubp1Q811S7 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Ubp1Q811S7 Gm42494-201ENSMUST00000196515 3051 ntBASIC4.84□□□□□ -1.63
Ubp1Q811S7 Gm44049-201ENSMUST00000204905 2984 ntBASIC4.84□□□□□ -1.63
Ubp1Q811S7 Gm37887-201ENSMUST00000192752 2716 ntBASIC4.84□□□□□ -1.63
Ubp1Q811S7 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Ubp1Q811S7 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Ubp1Q811S7 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
Ubp1Q811S7 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Ubp1Q811S7 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
Ubp1Q811S7 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Ubp1Q811S7 Gm43426-201ENSMUST00000197287 2597 ntBASIC4.83□□□□□ -1.64
Ubp1Q811S7 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Ubp1Q811S7 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Ubp1Q811S7 Gm37204-201ENSMUST00000192389 3961 ntBASIC4.83□□□□□ -1.64
Ubp1Q811S7 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.83□□□□□ -1.64
Ubp1Q811S7 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Ubp1Q811S7 Gm14512-201ENSMUST00000117924 230 ntBASIC4.83□□□□□ -1.64
Ubp1Q811S7 Gm15244-201ENSMUST00000121122 130 ntBASIC4.83□□□□□ -1.64
Ubp1Q811S7 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC4.83□□□□□ -1.64
Ubp1Q811S7 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC4.83□□□□□ -1.64
Ubp1Q811S7 Gm16345-201ENSMUST00000146065 158 ntBASIC4.83□□□□□ -1.64
Ubp1Q811S7 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC4.83□□□□□ -1.64
Ubp1Q811S7 Gm26153-201ENSMUST00000157433 127 ntBASIC4.83□□□□□ -1.64
Ubp1Q811S7 Gm26320-201ENSMUST00000157742 306 ntBASIC4.83□□□□□ -1.64
Ubp1Q811S7 Gm24885-201ENSMUST00000158783 270 ntBASIC4.83□□□□□ -1.64
Ubp1Q811S7 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Ubp1Q811S7 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Ubp1Q811S7 Gm20397-201ENSMUST00000174520 362 ntBASIC4.83□□□□□ -1.64
Ubp1Q811S7 Gm5777-201ENSMUST00000177265 448 ntBASIC4.83□□□□□ -1.64
Ubp1Q811S7 Gm21816-201ENSMUST00000179255 360 ntBASIC4.83□□□□□ -1.64
Ubp1Q811S7 Gm27254-201ENSMUST00000183926 517 ntBASIC4.83□□□□□ -1.64
Ubp1Q811S7 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ubp1Q811S7 Gm28097-201ENSMUST00000187333 366 ntBASIC4.83□□□□□ -1.64
Ubp1Q811S7 Gm29610-201ENSMUST00000187749 453 ntBASIC4.83□□□□□ -1.64
Ubp1Q811S7 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.83□□□□□ -1.64
Ubp1Q811S7 Gm18384-201ENSMUST00000195974 808 ntBASIC4.83□□□□□ -1.64
Ubp1Q811S7 AC131720.3-201ENSMUST00000219113 275 ntBASIC4.83□□□□□ -1.64
Ubp1Q811S7 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Ubp1Q811S7 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Ubp1Q811S7 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Ubp1Q811S7 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ubp1Q811S7 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Ubp1Q811S7 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Ubp1Q811S7 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ubp1Q811S7 Gm3623-201ENSMUST00000173643 2747 ntBASIC4.82□□□□□ -1.64
Ubp1Q811S7 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
Ubp1Q811S7 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ubp1Q811S7 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ubp1Q811S7 Gm15215-201ENSMUST00000117773 489 ntBASIC4.82□□□□□ -1.64
Ubp1Q811S7 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC4.82□□□□□ -1.64
Ubp1Q811S7 Gm13213-201ENSMUST00000119668 474 ntBASIC4.82□□□□□ -1.64
Ubp1Q811S7 Gm12771-201ENSMUST00000120246 135 ntBASIC4.82□□□□□ -1.64
Ubp1Q811S7 Gm14037-201ENSMUST00000120576 313 ntBASIC4.82□□□□□ -1.64
Ubp1Q811S7 Gm23184-201ENSMUST00000122594 131 ntBASIC4.82□□□□□ -1.64
Ubp1Q811S7 Gm24371-201ENSMUST00000122662 267 ntBASIC4.82□□□□□ -1.64
Ubp1Q811S7 Gm25220-201ENSMUST00000157546 95 ntBASIC4.82□□□□□ -1.64
Ubp1Q811S7 Gm23546-201ENSMUST00000158211 137 ntBASIC4.82□□□□□ -1.64
Ubp1Q811S7 Gm24944-201ENSMUST00000158330 128 ntBASIC4.82□□□□□ -1.64
Ubp1Q811S7 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC4.82□□□□□ -1.64
Ubp1Q811S7 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC4.82□□□□□ -1.64
Ubp1Q811S7 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ubp1Q811S7 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC4.82□□□□□ -1.64
Ubp1Q811S7 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.82□□□□□ -1.64
Ubp1Q811S7 Gm20056-201ENSMUST00000194813 519 ntBASIC4.82□□□□□ -1.64
Ubp1Q811S7 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC4.82□□□□□ -1.64
Ubp1Q811S7 Gm18011-201ENSMUST00000203717 565 ntBASIC4.82□□□□□ -1.64
Ubp1Q811S7 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC4.82□□□□□ -1.64
Ubp1Q811S7 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC4.82□□□□□ -1.64
Ubp1Q811S7 Gm17811-201ENSMUST00000206193 387 ntBASIC4.82□□□□□ -1.64
Ubp1Q811S7 AC164304.1-201ENSMUST00000226920 272 ntBASIC4.82□□□□□ -1.64
Ubp1Q811S7 AC154738.5-201ENSMUST00000227397 310 ntBASIC4.82□□□□□ -1.64
Ubp1Q811S7 Gm24316-201ENSMUST00000083041 107 ntBASIC4.82□□□□□ -1.64
Ubp1Q811S7 AC115970.1-201ENSMUST00000218910 1758 ntBASIC4.82□□□□□ -1.64
Ubp1Q811S7 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Ubp1Q811S7 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
Ubp1Q811S7 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ubp1Q811S7 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Ubp1Q811S7 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ubp1Q811S7 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ubp1Q811S7 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ubp1Q811S7 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Ubp1Q811S7 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ubp1Q811S7 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ubp1Q811S7 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ubp1Q811S7 Gm14551-201ENSMUST00000120802 256 ntBASIC4.81□□□□□ -1.64
Ubp1Q811S7 Gm27723-201ENSMUST00000157398 63 ntBASIC4.81□□□□□ -1.64
Ubp1Q811S7 Gm24005-201ENSMUST00000158459 296 ntBASIC4.81□□□□□ -1.64
Ubp1Q811S7 Gm25162-201ENSMUST00000158906 159 ntBASIC4.81□□□□□ -1.64
Ubp1Q811S7 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Ubp1Q811S7 Gm17186-201ENSMUST00000171742 456 ntBASIC4.81□□□□□ -1.64
Ubp1Q811S7 Gm3370-201ENSMUST00000171785 500 ntBASIC4.81□□□□□ -1.64
Ubp1Q811S7 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ubp1Q811S7 Gm37123-201ENSMUST00000192994 1171 ntBASIC4.81□□□□□ -1.64
Ubp1Q811S7 Gm38060-201ENSMUST00000194822 464 ntBASIC4.81□□□□□ -1.64
Ubp1Q811S7 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC4.81□□□□□ -1.64
Ubp1Q811S7 Gm44779-201ENSMUST00000206937 708 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 147.1 ms