Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
Col4a4Q9QZR9 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
Col4a4Q9QZR9 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC2.34□□□□□ -2.04
Col4a4Q9QZR9 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC2.34□□□□□ -2.04
Col4a4Q9QZR9 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
Col4a4Q9QZR9 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
Col4a4Q9QZR9 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Col4a4Q9QZR9 Gm45130-201ENSMUST00000207574 3388 ntBASIC2.33□□□□□ -2.04
Col4a4Q9QZR9 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC2.33□□□□□ -2.04
Col4a4Q9QZR9 Gm23256-201ENSMUST00000102235 110 ntBASIC2.33□□□□□ -2.04
Col4a4Q9QZR9 Gm24715-201ENSMUST00000102377 95 ntBASIC2.33□□□□□ -2.04
Col4a4Q9QZR9 Gm22543-201ENSMUST00000104347 94 ntBASIC2.33□□□□□ -2.04
Col4a4Q9QZR9 n-R5s52-201ENSMUST00000104614 113 ntBASIC2.33□□□□□ -2.04
Col4a4Q9QZR9 Gm12584-201ENSMUST00000117109 1105 ntBASIC2.33□□□□□ -2.04
Col4a4Q9QZR9 Gm12587-201ENSMUST00000120180 427 ntBASIC2.33□□□□□ -2.04
Col4a4Q9QZR9 Gm22985-201ENSMUST00000122754 116 ntBASIC2.33□□□□□ -2.04
Col4a4Q9QZR9 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Col4a4Q9QZR9 Gm24736-201ENSMUST00000158862 130 ntBASIC2.33□□□□□ -2.04
Col4a4Q9QZR9 Gm25839-201ENSMUST00000158921 103 ntBASIC2.33□□□□□ -2.04
Col4a4Q9QZR9 Gm17194-201ENSMUST00000164610 348 ntBASIC2.33□□□□□ -2.04
Col4a4Q9QZR9 Gm23152-201ENSMUST00000175322 116 ntBASIC2.33□□□□□ -2.04
Col4a4Q9QZR9 Gm5268-201ENSMUST00000189212 940 ntBASIC2.33□□□□□ -2.04
Col4a4Q9QZR9 Gm21489-201ENSMUST00000189668 818 ntBASIC2.33□□□□□ -2.04
Col4a4Q9QZR9 Gm29657-201ENSMUST00000189807 342 ntBASIC2.33□□□□□ -2.04
Col4a4Q9QZR9 Gm37219-201ENSMUST00000192036 926 ntBASIC2.33□□□□□ -2.04
Col4a4Q9QZR9 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC2.33□□□□□ -2.04
Col4a4Q9QZR9 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC2.33□□□□□ -2.04
Col4a4Q9QZR9 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC2.33□□□□□ -2.04
Col4a4Q9QZR9 Gm45380-201ENSMUST00000210465 315 ntBASIC2.33□□□□□ -2.04
Col4a4Q9QZR9 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
Col4a4Q9QZR9 AC154252.1-201ENSMUST00000226041 473 ntBASIC2.33□□□□□ -2.04
Col4a4Q9QZR9 CT025538.2-201ENSMUST00000226083 772 ntBASIC2.33□□□□□ -2.04
Col4a4Q9QZR9 AC154692.1-201ENSMUST00000228314 544 ntBASIC2.33□□□□□ -2.04
Col4a4Q9QZR9 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Col4a4Q9QZR9 Gm10212-201ENSMUST00000087884 324 ntBASIC2.33□□□□□ -2.04
Col4a4Q9QZR9 Gm21286-201ENSMUST00000098035 545 ntBASIC2.33□□□□□ -2.04
Col4a4Q9QZR9 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Col4a4Q9QZR9 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC2.33□□□□□ -2.04
Col4a4Q9QZR9 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Col4a4Q9QZR9 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Col4a4Q9QZR9 Gm44562-201ENSMUST00000207194 1347 ntBASIC2.32□□□□□ -2.04
Col4a4Q9QZR9 Gm24890-201ENSMUST00000104389 102 ntBASIC2.32□□□□□ -2.04
Col4a4Q9QZR9 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
Col4a4Q9QZR9 Mir1192-201ENSMUST00000116976 121 ntBASIC2.32□□□□□ -2.04
Col4a4Q9QZR9 Gm15090-201ENSMUST00000118787 1196 ntBASIC2.32□□□□□ -2.04
Col4a4Q9QZR9 Gm13341-201ENSMUST00000120780 672 ntBASIC2.32□□□□□ -2.04
Col4a4Q9QZR9 Gm14623-201ENSMUST00000121398 603 ntBASIC2.32□□□□□ -2.04
Col4a4Q9QZR9 Gm11575-201ENSMUST00000122243 228 ntBASIC2.32□□□□□ -2.04
Col4a4Q9QZR9 Gm15089-201ENSMUST00000122332 1196 ntBASIC2.32□□□□□ -2.04
Col4a4Q9QZR9 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Col4a4Q9QZR9 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC2.32□□□□□ -2.04
Col4a4Q9QZR9 Gm22036-201ENSMUST00000157279 215 ntBASIC2.32□□□□□ -2.04
Col4a4Q9QZR9 Gm24811-201ENSMUST00000175313 100 ntBASIC2.32□□□□□ -2.04
Col4a4Q9QZR9 Gm18415-201ENSMUST00000177464 647 ntBASIC2.32□□□□□ -2.04
Col4a4Q9QZR9 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC2.32□□□□□ -2.04
Col4a4Q9QZR9 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC2.32□□□□□ -2.04
Col4a4Q9QZR9 Gm19252-201ENSMUST00000204705 305 ntBASIC2.32□□□□□ -2.04
Col4a4Q9QZR9 Gm8031-201ENSMUST00000213430 626 ntBASIC2.32□□□□□ -2.04
Col4a4Q9QZR9 AC116726.2-201ENSMUST00000217629 986 ntBASIC2.32□□□□□ -2.04
Col4a4Q9QZR9 AC159472.1-201ENSMUST00000218178 463 ntBASIC2.32□□□□□ -2.04
Col4a4Q9QZR9 AC158631.1-201ENSMUST00000219202 138 ntBASIC2.32□□□□□ -2.04
Col4a4Q9QZR9 AC239878.2-201ENSMUST00000224048 464 ntBASIC2.32□□□□□ -2.04
Col4a4Q9QZR9 AC192088.2-201ENSMUST00000227590 411 ntBASIC2.32□□□□□ -2.04
Col4a4Q9QZR9 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Col4a4Q9QZR9 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Col4a4Q9QZR9 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Col4a4Q9QZR9 AF357341-201ENSMUST00000083088 75 ntBASIC2.32□□□□□ -2.04
Col4a4Q9QZR9 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Col4a4Q9QZR9 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Col4a4Q9QZR9 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Col4a4Q9QZR9 Gm25414-201ENSMUST00000101814 107 ntBASIC2.31□□□□□ -2.04
Col4a4Q9QZR9 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Col4a4Q9QZR9 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC2.31□□□□□ -2.04
Col4a4Q9QZR9 Gm24002-201ENSMUST00000158456 104 ntBASIC2.31□□□□□ -2.04
Col4a4Q9QZR9 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.31□□□□□ -2.04
Col4a4Q9QZR9 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Col4a4Q9QZR9 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Col4a4Q9QZR9 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Col4a4Q9QZR9 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Col4a4Q9QZR9 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Col4a4Q9QZR9 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Col4a4Q9QZR9 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Col4a4Q9QZR9 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Col4a4Q9QZR9 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Col4a4Q9QZR9 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Col4a4Q9QZR9 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Col4a4Q9QZR9 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC2.31□□□□□ -2.04
Col4a4Q9QZR9 Gm38154-201ENSMUST00000195444 340 ntBASIC2.31□□□□□ -2.04
Col4a4Q9QZR9 Gm42454-201ENSMUST00000196805 1181 ntBASIC2.31□□□□□ -2.04
Col4a4Q9QZR9 AL928567.1-201ENSMUST00000197891 138 ntBASIC2.31□□□□□ -2.04
Col4a4Q9QZR9 Gm42796-201ENSMUST00000199913 1087 ntBASIC2.31□□□□□ -2.04
Col4a4Q9QZR9 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC2.31□□□□□ -2.04
Col4a4Q9QZR9 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC2.31□□□□□ -2.04
Col4a4Q9QZR9 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC2.31□□□□□ -2.04
Col4a4Q9QZR9 Gm7530-201ENSMUST00000218466 605 ntBASIC2.31□□□□□ -2.04
Col4a4Q9QZR9 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Col4a4Q9QZR9 Gm23460-201ENSMUST00000083258 109 ntBASIC2.31□□□□□ -2.04
Col4a4Q9QZR9 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Col4a4Q9QZR9 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Col4a4Q9QZR9 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 221.6 ms