Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ubp1Q811S7 Gm27796-201ENSMUST00000183863 261 ntBASIC4.87□□□□□ -1.63
Ubp1Q811S7 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC4.87□□□□□ -1.63
Ubp1Q811S7 Gm28755-201ENSMUST00000185773 199 ntBASIC4.87□□□□□ -1.63
Ubp1Q811S7 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC4.87□□□□□ -1.63
Ubp1Q811S7 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Ubp1Q811S7 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC4.87□□□□□ -1.63
Ubp1Q811S7 Gm6240-201ENSMUST00000208014 473 ntBASIC4.87□□□□□ -1.63
Ubp1Q811S7 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC4.87□□□□□ -1.63
Ubp1Q811S7 AC158622.1-201ENSMUST00000217107 230 ntBASIC4.87□□□□□ -1.63
Ubp1Q811S7 Gm46997-201ENSMUST00000222108 217 ntBASIC4.87□□□□□ -1.63
Ubp1Q811S7 AC241593.1-201ENSMUST00000224768 397 ntBASIC4.87□□□□□ -1.63
Ubp1Q811S7 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC4.87□□□□□ -1.63
Ubp1Q811S7 Gm7665-201ENSMUST00000076710 297 ntBASIC4.87□□□□□ -1.63
Ubp1Q811S7 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Ubp1Q811S7 Gm44250-201ENSMUST00000203092 4229 ntBASIC4.87□□□□□ -1.63
Ubp1Q811S7 Gm3962-201ENSMUST00000173027 2587 ntBASIC4.87□□□□□ -1.63
Ubp1Q811S7 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Ubp1Q811S7 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Ubp1Q811S7 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Ubp1Q811S7 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Ubp1Q811S7 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Ubp1Q811S7 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Ubp1Q811S7 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Ubp1Q811S7 Gm37792-201ENSMUST00000195761 3413 ntBASIC4.86□□□□□ -1.63
Ubp1Q811S7 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Ubp1Q811S7 Mir875-201ENSMUST00000104698 78 ntBASIC4.86□□□□□ -1.63
Ubp1Q811S7 Gm11742-201ENSMUST00000119903 233 ntBASIC4.86□□□□□ -1.63
Ubp1Q811S7 Gm13692-201ENSMUST00000120774 371 ntBASIC4.86□□□□□ -1.63
Ubp1Q811S7 Gm15223-201ENSMUST00000120989 826 ntBASIC4.86□□□□□ -1.63
Ubp1Q811S7 Gm11456-201ENSMUST00000121070 256 ntBASIC4.86□□□□□ -1.63
Ubp1Q811S7 Gm14581-201ENSMUST00000121726 198 ntBASIC4.86□□□□□ -1.63
Ubp1Q811S7 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.86□□□□□ -1.63
Ubp1Q811S7 Gm26101-201ENSMUST00000157246 105 ntBASIC4.86□□□□□ -1.63
Ubp1Q811S7 Gm25054-201ENSMUST00000157370 97 ntBASIC4.86□□□□□ -1.63
Ubp1Q811S7 Scarna6-201ENSMUST00000158656 265 ntBASIC4.86□□□□□ -1.63
Ubp1Q811S7 Gm27551-201ENSMUST00000184258 77 ntBASIC4.86□□□□□ -1.63
Ubp1Q811S7 Gm19503-201ENSMUST00000187109 241 ntBASIC4.86□□□□□ -1.63
Ubp1Q811S7 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC4.86□□□□□ -1.63
Ubp1Q811S7 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Ubp1Q811S7 Gm43855-201ENSMUST00000197462 507 ntBASIC4.86□□□□□ -1.63
Ubp1Q811S7 Gm17766-201ENSMUST00000209223 442 ntBASIC4.86□□□□□ -1.63
Ubp1Q811S7 AC165157.3-201ENSMUST00000220815 103 ntBASIC4.86□□□□□ -1.63
Ubp1Q811S7 Gm7040-201ENSMUST00000223271 443 ntBASIC4.86□□□□□ -1.63
Ubp1Q811S7 AC154452.1-201ENSMUST00000225819 241 ntBASIC4.86□□□□□ -1.63
Ubp1Q811S7 Gm7117-201ENSMUST00000071515 387 ntBASIC4.86□□□□□ -1.63
Ubp1Q811S7 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Ubp1Q811S7 Gm22358-201ENSMUST00000082877 122 ntBASIC4.86□□□□□ -1.63
Ubp1Q811S7 Gm25818-201ENSMUST00000083282 164 ntBASIC4.86□□□□□ -1.63
Ubp1Q811S7 Gm25188-201ENSMUST00000083913 122 ntBASIC4.86□□□□□ -1.63
Ubp1Q811S7 Gm23796-201ENSMUST00000084011 160 ntBASIC4.86□□□□□ -1.63
Ubp1Q811S7 Gm7676-201ENSMUST00000084055 319 ntBASIC4.86□□□□□ -1.63
Ubp1Q811S7 Gm45129-201ENSMUST00000208444 2224 ntBASIC4.86□□□□□ -1.63
Ubp1Q811S7 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Ubp1Q811S7 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Ubp1Q811S7 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.86□□□□□ -1.63
Ubp1Q811S7 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Ubp1Q811S7 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Ubp1Q811S7 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Ubp1Q811S7 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Ubp1Q811S7 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Ubp1Q811S7 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Ubp1Q811S7 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Ubp1Q811S7 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Ubp1Q811S7 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Ubp1Q811S7 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC4.85□□□□□ -1.63
Ubp1Q811S7 Gm16060-201ENSMUST00000153140 478 ntBASIC4.85□□□□□ -1.63
Ubp1Q811S7 Gm25383-201ENSMUST00000157810 144 ntBASIC4.85□□□□□ -1.63
Ubp1Q811S7 Gm29596-201ENSMUST00000185710 385 ntBASIC4.85□□□□□ -1.63
Ubp1Q811S7 Gm37162-201ENSMUST00000191708 551 ntBASIC4.85□□□□□ -1.63
Ubp1Q811S7 Gm42643-201ENSMUST00000200504 279 ntBASIC4.85□□□□□ -1.63
Ubp1Q811S7 Gm44184-201ENSMUST00000204290 132 ntBASIC4.85□□□□□ -1.63
Ubp1Q811S7 AC164161.1-201ENSMUST00000214076 639 ntBASIC4.85□□□□□ -1.63
Ubp1Q811S7 Mir30b-201ENSMUST00000083542 96 ntBASIC4.85□□□□□ -1.63
Ubp1Q811S7 Gm8074-201ENSMUST00000095071 252 ntBASIC4.85□□□□□ -1.63
Ubp1Q811S7 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC4.85□□□□□ -1.63
Ubp1Q811S7 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.85□□□□□ -1.63
Ubp1Q811S7 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Ubp1Q811S7 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Ubp1Q811S7 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Ubp1Q811S7 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Ubp1Q811S7 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Ubp1Q811S7 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Ubp1Q811S7 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.85□□□□□ -1.63
Ubp1Q811S7 AC131743.1-201ENSMUST00000222138 4024 ntBASIC4.84□□□□□ -1.63
Ubp1Q811S7 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC4.84□□□□□ -1.63
Ubp1Q811S7 Gm8674-201ENSMUST00000179367 3047 ntBASIC4.84□□□□□ -1.63
Ubp1Q811S7 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Ubp1Q811S7 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Ubp1Q811S7 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Ubp1Q811S7 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Ubp1Q811S7 Zscan4a-201ENSMUST00000210573 2279 ntBASIC4.84□□□□□ -1.63
Ubp1Q811S7 Gm42616-201ENSMUST00000198989 4184 ntBASIC4.84□□□□□ -1.63
Ubp1Q811S7 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Ubp1Q811S7 Gm13343-201ENSMUST00000116474 105 ntBASIC4.84□□□□□ -1.63
Ubp1Q811S7 Gm13439-201ENSMUST00000117541 409 ntBASIC4.84□□□□□ -1.63
Ubp1Q811S7 Gm12423-201ENSMUST00000118334 135 ntBASIC4.84□□□□□ -1.63
Ubp1Q811S7 Gm14619-201ENSMUST00000120480 168 ntBASIC4.84□□□□□ -1.63
Ubp1Q811S7 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC4.84□□□□□ -1.63
Ubp1Q811S7 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC4.84□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 205.1 ms