Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Mir693-201ENSMUST00000102187 89 ntBASIC2.37□□□□□ -2.03
Col4a4Q9QZR9 Gm15195-201ENSMUST00000118775 263 ntBASIC2.37□□□□□ -2.03
Col4a4Q9QZR9 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
Col4a4Q9QZR9 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC2.37□□□□□ -2.03
Col4a4Q9QZR9 Gm26411-201ENSMUST00000157668 107 ntBASIC2.37□□□□□ -2.03
Col4a4Q9QZR9 Gm3025-201ENSMUST00000163454 489 ntBASIC2.37□□□□□ -2.03
Col4a4Q9QZR9 Gm2878-201ENSMUST00000170173 486 ntBASIC2.37□□□□□ -2.03
Col4a4Q9QZR9 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC2.37□□□□□ -2.03
Col4a4Q9QZR9 Gm37543-201ENSMUST00000192443 1031 ntBASIC2.37□□□□□ -2.03
Col4a4Q9QZR9 Gm43975-201ENSMUST00000203023 481 ntBASIC2.37□□□□□ -2.03
Col4a4Q9QZR9 Gm43901-201ENSMUST00000203247 453 ntBASIC2.37□□□□□ -2.03
Col4a4Q9QZR9 Gm43967-201ENSMUST00000203787 301 ntBASIC2.37□□□□□ -2.03
Col4a4Q9QZR9 Gm18540-201ENSMUST00000204025 526 ntBASIC2.37□□□□□ -2.03
Col4a4Q9QZR9 Gm44954-201ENSMUST00000208513 227 ntBASIC2.37□□□□□ -2.03
Col4a4Q9QZR9 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC2.37□□□□□ -2.03
Col4a4Q9QZR9 AC124399.1-201ENSMUST00000218334 590 ntBASIC2.37□□□□□ -2.03
Col4a4Q9QZR9 AC138401.1-201ENSMUST00000221533 116 ntBASIC2.37□□□□□ -2.03
Col4a4Q9QZR9 CT030254.3-201ENSMUST00000225959 1231 ntBASIC2.37□□□□□ -2.03
Col4a4Q9QZR9 AC133654.1-201ENSMUST00000228411 672 ntBASIC2.37□□□□□ -2.03
Col4a4Q9QZR9 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Col4a4Q9QZR9 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Col4a4Q9QZR9 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
Col4a4Q9QZR9 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Col4a4Q9QZR9 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
Col4a4Q9QZR9 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Col4a4Q9QZR9 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Col4a4Q9QZR9 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Col4a4Q9QZR9 Gm15844-201ENSMUST00000118016 576 ntBASIC2.36□□□□□ -2.03
Col4a4Q9QZR9 Gm14793-201ENSMUST00000118739 311 ntBASIC2.36□□□□□ -2.03
Col4a4Q9QZR9 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC2.36□□□□□ -2.03
Col4a4Q9QZR9 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Col4a4Q9QZR9 Gm25120-201ENSMUST00000180148 79 ntBASIC2.36□□□□□ -2.03
Col4a4Q9QZR9 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC2.36□□□□□ -2.03
Col4a4Q9QZR9 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC2.36□□□□□ -2.03
Col4a4Q9QZR9 Gm44665-201ENSMUST00000205381 251 ntBASIC2.36□□□□□ -2.03
Col4a4Q9QZR9 AC153801.1-201ENSMUST00000217904 947 ntBASIC2.36□□□□□ -2.03
Col4a4Q9QZR9 AC164629.1-201ENSMUST00000220250 1113 ntBASIC2.36□□□□□ -2.03
Col4a4Q9QZR9 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Col4a4Q9QZR9 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Col4a4Q9QZR9 Gm22245-201ENSMUST00000082479 103 ntBASIC2.36□□□□□ -2.03
Col4a4Q9QZR9 Gm37824-201ENSMUST00000193430 3236 ntBASIC2.36□□□□□ -2.03
Col4a4Q9QZR9 Gm6207-201ENSMUST00000120075 1386 ntBASIC2.36□□□□□ -2.03
Col4a4Q9QZR9 Gm6228-201ENSMUST00000178856 1386 ntBASIC2.36□□□□□ -2.03
Col4a4Q9QZR9 Gm6757-201ENSMUST00000189810 1706 ntBASIC2.36□□□□□ -2.03
Col4a4Q9QZR9 Gm15095-201ENSMUST00000118996 1430 ntBASIC2.36□□□□□ -2.03
Col4a4Q9QZR9 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.36□□□□□ -2.03
Col4a4Q9QZR9 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC2.36□□□□□ -2.03
Col4a4Q9QZR9 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.35□□□□□ -2.03
Col4a4Q9QZR9 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.35□□□□□ -2.03
Col4a4Q9QZR9 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col4a4Q9QZR9 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
Col4a4Q9QZR9 Gm24340-201ENSMUST00000104208 97 ntBASIC2.35□□□□□ -2.03
Col4a4Q9QZR9 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.35□□□□□ -2.03
Col4a4Q9QZR9 Gm13676-201ENSMUST00000122185 591 ntBASIC2.35□□□□□ -2.03
Col4a4Q9QZR9 Gm22793-201ENSMUST00000157227 330 ntBASIC2.35□□□□□ -2.03
Col4a4Q9QZR9 Gm16147-201ENSMUST00000162143 373 ntBASIC2.35□□□□□ -2.03
Col4a4Q9QZR9 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC2.35□□□□□ -2.03
Col4a4Q9QZR9 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Col4a4Q9QZR9 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col4a4Q9QZR9 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC2.35□□□□□ -2.03
Col4a4Q9QZR9 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC2.35□□□□□ -2.03
Col4a4Q9QZR9 Gm38214-201ENSMUST00000192581 988 ntBASIC2.35□□□□□ -2.03
Col4a4Q9QZR9 Gm37002-201ENSMUST00000194560 373 ntBASIC2.35□□□□□ -2.03
Col4a4Q9QZR9 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC2.35□□□□□ -2.03
Col4a4Q9QZR9 Gm37431-201ENSMUST00000195102 111 ntBASIC2.35□□□□□ -2.03
Col4a4Q9QZR9 Gm37993-201ENSMUST00000195301 988 ntBASIC2.35□□□□□ -2.03
Col4a4Q9QZR9 Mir703-201ENSMUST00000197105 109 ntBASIC2.35□□□□□ -2.03
Col4a4Q9QZR9 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.35□□□□□ -2.03
Col4a4Q9QZR9 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Col4a4Q9QZR9 AC153662.1-201ENSMUST00000222220 270 ntBASIC2.35□□□□□ -2.03
Col4a4Q9QZR9 AC173481.1-201ENSMUST00000223351 270 ntBASIC2.35□□□□□ -2.03
Col4a4Q9QZR9 AC170086.1-201ENSMUST00000225190 497 ntBASIC2.35□□□□□ -2.03
Col4a4Q9QZR9 AC124400.1-201ENSMUST00000225779 193 ntBASIC2.35□□□□□ -2.03
Col4a4Q9QZR9 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Col4a4Q9QZR9 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Col4a4Q9QZR9 Gm22806-201ENSMUST00000082738 136 ntBASIC2.35□□□□□ -2.03
Col4a4Q9QZR9 Gm25628-201ENSMUST00000084002 105 ntBASIC2.35□□□□□ -2.03
Col4a4Q9QZR9 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Col4a4Q9QZR9 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
Col4a4Q9QZR9 Gm25317-201ENSMUST00000116824 129 ntBASIC2.34□□□□□ -2.03
Col4a4Q9QZR9 Gm16331-201ENSMUST00000144274 498 ntBASIC2.34□□□□□ -2.03
Col4a4Q9QZR9 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.34□□□□□ -2.03
Col4a4Q9QZR9 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Col4a4Q9QZR9 Gm17183-201ENSMUST00000171170 493 ntBASIC2.34□□□□□ -2.03
Col4a4Q9QZR9 Gm29815-201ENSMUST00000202418 178 ntBASIC2.34□□□□□ -2.03
Col4a4Q9QZR9 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.34□□□□□ -2.03
Col4a4Q9QZR9 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.34□□□□□ -2.03
Col4a4Q9QZR9 AC124549.2-201ENSMUST00000224243 222 ntBASIC2.34□□□□□ -2.03
Col4a4Q9QZR9 Gm22304-201ENSMUST00000082688 129 ntBASIC2.34□□□□□ -2.03
Col4a4Q9QZR9 Mir222-201ENSMUST00000083537 79 ntBASIC2.34□□□□□ -2.03
Col4a4Q9QZR9 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Col4a4Q9QZR9 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Col4a4Q9QZR9 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Col4a4Q9QZR9 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Col4a4Q9QZR9 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.34□□□□□ -2.04
Col4a4Q9QZR9 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.34□□□□□ -2.04
Col4a4Q9QZR9 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC2.34□□□□□ -2.04
Col4a4Q9QZR9 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC2.34□□□□□ -2.04
Col4a4Q9QZR9 Mir6393-201ENSMUST00000183709 94 ntBASIC2.34□□□□□ -2.04
Col4a4Q9QZR9 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC2.34□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 155 ms