Protein–RNA interactions for Protein: Q9DCN7

Rnft1, E3 ubiquitin-protein ligase RNFT1, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1Q9DCN7 CT025536.1-201ENSMUST00000226744 844 ntBASIC4.06□□□□□ -1.76
Rnft1Q9DCN7 Gm10038-201ENSMUST00000077233 441 ntBASIC4.06□□□□□ -1.76
Rnft1Q9DCN7 Gm23678-201ENSMUST00000083157 107 ntBASIC4.06□□□□□ -1.76
Rnft1Q9DCN7 Gm23461-201ENSMUST00000083265 107 ntBASIC4.06□□□□□ -1.76
Rnft1Q9DCN7 Gm25792-201ENSMUST00000083289 100 ntBASIC4.06□□□□□ -1.76
Rnft1Q9DCN7 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Rnft1Q9DCN7 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Rnft1Q9DCN7 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Rnft1Q9DCN7 Gm42528-201ENSMUST00000200697 3418 ntBASIC4.06□□□□□ -1.76
Rnft1Q9DCN7 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Rnft1Q9DCN7 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 Gm37011-201ENSMUST00000195543 2935 ntBASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 Gm22272-201ENSMUST00000104039 134 ntBASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 Gm5757-201ENSMUST00000117494 528 ntBASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 Gm12815-201ENSMUST00000121737 135 ntBASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 Gm16358-201ENSMUST00000146046 210 ntBASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 Gm26348-201ENSMUST00000157528 240 ntBASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 Gm24464-201ENSMUST00000179697 107 ntBASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 Gm21960-201ENSMUST00000181924 452 ntBASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 Mir7031-201ENSMUST00000183860 65 ntBASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 Ighv1-40-201ENSMUST00000194231 345 ntBASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 Gm35702-201ENSMUST00000198653 511 ntBASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 Gm43393-201ENSMUST00000200147 194 ntBASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 Gm19726-201ENSMUST00000205008 240 ntBASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 Gm44609-201ENSMUST00000207157 460 ntBASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 AC099578.1-201ENSMUST00000220147 435 ntBASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 CT572985.2-201ENSMUST00000220496 211 ntBASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 CR974429.1-201ENSMUST00000220877 827 ntBASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 Gm9309-201ENSMUST00000223537 546 ntBASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 AC155167.1-201ENSMUST00000228931 614 ntBASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 Gm10222-201ENSMUST00000088336 294 ntBASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 Olfr713-201ENSMUST00000098139 975 ntBASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Rnft1Q9DCN7 Gm38069-201ENSMUST00000195360 2144 ntBASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Gm23608-201ENSMUST00000104545 128 ntBASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Gm23879-201ENSMUST00000116874 126 ntBASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Gm15994-201ENSMUST00000118029 402 ntBASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Gm14570-201ENSMUST00000119444 391 ntBASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Gm6584-201ENSMUST00000119671 447 ntBASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Gm5379-201ENSMUST00000120973 826 ntBASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Gm14916-201ENSMUST00000121904 204 ntBASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Gm11281-201ENSMUST00000141391 576 ntBASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Gm23171-201ENSMUST00000157159 264 ntBASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Gm23743-201ENSMUST00000157389 274 ntBASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Gm22536-201ENSMUST00000158171 134 ntBASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Gm24546-201ENSMUST00000158652 102 ntBASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Mir5103-201ENSMUST00000175111 79 ntBASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Gm27883-201ENSMUST00000183941 102 ntBASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Gm27899-201ENSMUST00000184715 64 ntBASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Gm37746-201ENSMUST00000193249 198 ntBASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Gm37300-201ENSMUST00000193327 280 ntBASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Gm18854-201ENSMUST00000211196 329 ntBASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Gm19326-201ENSMUST00000219818 326 ntBASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Gm9318-201ENSMUST00000222444 438 ntBASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 AC133156.1-202ENSMUST00000227284 363 ntBASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 AC151833.1-201ENSMUST00000227752 574 ntBASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 AC100733.1-201ENSMUST00000228494 407 ntBASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Gm26447-201ENSMUST00000082448 129 ntBASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Rnft1Q9DCN7 Gm42681-201ENSMUST00000197999 1611 ntBASIC4.03□□□□□ -1.76
Rnft1Q9DCN7 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 174.1 ms