Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Gm26396-201ENSMUST00000104093 132 ntBASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Gm12515-201ENSMUST00000120116 361 ntBASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Gm22988-201ENSMUST00000122759 144 ntBASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Gm4916-201ENSMUST00000126139 642 ntBASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Gm23960-201ENSMUST00000157206 131 ntBASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Gm24439-201ENSMUST00000157894 117 ntBASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Gm2389-201ENSMUST00000160487 189 ntBASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Gm21816-201ENSMUST00000179255 360 ntBASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Gm28010-201ENSMUST00000179485 126 ntBASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Gm29320-201ENSMUST00000185235 615 ntBASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Gm28781-201ENSMUST00000185760 696 ntBASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Gm29179-202ENSMUST00000186138 615 ntBASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Gm29448-201ENSMUST00000186675 615 ntBASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Gm29314-201ENSMUST00000186800 615 ntBASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Gm29307-201ENSMUST00000187367 696 ntBASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Gm28253-202ENSMUST00000187971 615 ntBASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Gm29339-201ENSMUST00000189613 696 ntBASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Gm29169-201ENSMUST00000189835 615 ntBASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Gm29407-201ENSMUST00000191468 696 ntBASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Gm37603-201ENSMUST00000192368 219 ntBASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Gm37343-201ENSMUST00000192542 111 ntBASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Gm44887-201ENSMUST00000208980 178 ntBASIC4.45□□□□□ -1.7
Brf1Q8CFK2 AC125379.1-201ENSMUST00000221928 111 ntBASIC4.45□□□□□ -1.7
Brf1Q8CFK2 AC134254.5-201ENSMUST00000223436 400 ntBASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Gm25853-201ENSMUST00000082793 132 ntBASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Gm24037-201ENSMUST00000082871 180 ntBASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Gm26056-201ENSMUST00000083043 104 ntBASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Gm25792-201ENSMUST00000083289 100 ntBASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Gm15773-201ENSMUST00000118665 1448 ntBASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Gm12010-201ENSMUST00000122400 2017 ntBASIC4.45□□□□□ -1.7
Brf1Q8CFK2 Gm43870-201ENSMUST00000205102 4369 ntBASIC4.44□□□□□ -1.7
Brf1Q8CFK2 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Brf1Q8CFK2 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.44□□□□□ -1.7
Brf1Q8CFK2 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Brf1Q8CFK2 Gm14594-201ENSMUST00000118052 537 ntBASIC4.44□□□□□ -1.7
Brf1Q8CFK2 Gm14590-201ENSMUST00000118934 537 ntBASIC4.44□□□□□ -1.7
Brf1Q8CFK2 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC4.44□□□□□ -1.7
Brf1Q8CFK2 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Brf1Q8CFK2 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC4.44□□□□□ -1.7
Brf1Q8CFK2 Gm23782-201ENSMUST00000157939 120 ntBASIC4.44□□□□□ -1.7
Brf1Q8CFK2 Gm22769-201ENSMUST00000158367 98 ntBASIC4.44□□□□□ -1.7
Brf1Q8CFK2 Gm22890-201ENSMUST00000158642 144 ntBASIC4.44□□□□□ -1.7
Brf1Q8CFK2 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Brf1Q8CFK2 Gm27903-201ENSMUST00000175482 126 ntBASIC4.44□□□□□ -1.7
Brf1Q8CFK2 Gm14596-201ENSMUST00000180268 537 ntBASIC4.44□□□□□ -1.7
Brf1Q8CFK2 Gm14595-201ENSMUST00000180335 537 ntBASIC4.44□□□□□ -1.7
Brf1Q8CFK2 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Brf1Q8CFK2 Gm27599-201ENSMUST00000183758 174 ntBASIC4.44□□□□□ -1.7
Brf1Q8CFK2 Mir6363-201ENSMUST00000184880 114 ntBASIC4.44□□□□□ -1.7
Brf1Q8CFK2 Gm28163-201ENSMUST00000187099 325 ntBASIC4.44□□□□□ -1.7
Brf1Q8CFK2 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC4.44□□□□□ -1.7
Brf1Q8CFK2 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Brf1Q8CFK2 Gm35876-201ENSMUST00000205044 459 ntBASIC4.44□□□□□ -1.7
Brf1Q8CFK2 Gm17989-201ENSMUST00000211543 412 ntBASIC4.44□□□□□ -1.7
Brf1Q8CFK2 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Brf1Q8CFK2 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Brf1Q8CFK2 AC115289.1-201ENSMUST00000224915 522 ntBASIC4.44□□□□□ -1.7
Brf1Q8CFK2 AC164883.9-201ENSMUST00000228042 399 ntBASIC4.44□□□□□ -1.7
Brf1Q8CFK2 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Brf1Q8CFK2 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Brf1Q8CFK2 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Brf1Q8CFK2 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Brf1Q8CFK2 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
Brf1Q8CFK2 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Brf1Q8CFK2 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Brf1Q8CFK2 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Brf1Q8CFK2 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
Brf1Q8CFK2 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Brf1Q8CFK2 Gm17976-201ENSMUST00000184037 1909 ntBASIC4.43□□□□□ -1.7
Brf1Q8CFK2 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Brf1Q8CFK2 Gm12427-201ENSMUST00000117719 302 ntBASIC4.43□□□□□ -1.7
Brf1Q8CFK2 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC4.43□□□□□ -1.7
Brf1Q8CFK2 Gm6969-201ENSMUST00000140065 342 ntBASIC4.43□□□□□ -1.7
Brf1Q8CFK2 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC4.43□□□□□ -1.7
Brf1Q8CFK2 Gm23781-201ENSMUST00000157940 308 ntBASIC4.43□□□□□ -1.7
Brf1Q8CFK2 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Brf1Q8CFK2 Gm24464-201ENSMUST00000179697 107 ntBASIC4.43□□□□□ -1.7
Brf1Q8CFK2 Gm19641-201ENSMUST00000188432 417 ntBASIC4.43□□□□□ -1.7
Brf1Q8CFK2 Gm38050-201ENSMUST00000191904 238 ntBASIC4.43□□□□□ -1.7
Brf1Q8CFK2 Gm43651-201ENSMUST00000199796 439 ntBASIC4.43□□□□□ -1.7
Brf1Q8CFK2 Crs-ps-201ENSMUST00000203723 760 ntBASIC4.43□□□□□ -1.7
Brf1Q8CFK2 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Brf1Q8CFK2 Gm45438-201ENSMUST00000210242 564 ntBASIC4.43□□□□□ -1.7
Brf1Q8CFK2 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC4.43□□□□□ -1.7
Brf1Q8CFK2 Gm45402-201ENSMUST00000211796 223 ntBASIC4.43□□□□□ -1.7
Brf1Q8CFK2 Gm35857-201ENSMUST00000212739 178 ntBASIC4.43□□□□□ -1.7
Brf1Q8CFK2 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC4.43□□□□□ -1.7
Brf1Q8CFK2 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC4.43□□□□□ -1.7
Brf1Q8CFK2 CT025602.1-201ENSMUST00000227281 382 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 158.4 ms