Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm37765-201ENSMUST00000192395 315 ntBASIC3.4□□□□□ -1.87
Trim58Q5NCC9 Gm37237-201ENSMUST00000192893 315 ntBASIC3.4□□□□□ -1.87
Trim58Q5NCC9 Gm36968-201ENSMUST00000193737 315 ntBASIC3.4□□□□□ -1.87
Trim58Q5NCC9 Gm38290-201ENSMUST00000195238 315 ntBASIC3.4□□□□□ -1.87
Trim58Q5NCC9 Gm42509-201ENSMUST00000197390 781 ntBASIC3.4□□□□□ -1.87
Trim58Q5NCC9 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC3.4□□□□□ -1.87
Trim58Q5NCC9 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
Trim58Q5NCC9 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC3.4□□□□□ -1.87
Trim58Q5NCC9 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Trim58Q5NCC9 CT573085.1-201ENSMUST00000224279 1197 ntBASIC3.4□□□□□ -1.87
Trim58Q5NCC9 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Trim58Q5NCC9 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Trim58Q5NCC9 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
Trim58Q5NCC9 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Trim58Q5NCC9 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Trim58Q5NCC9 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Trim58Q5NCC9 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
Trim58Q5NCC9 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.39□□□□□ -1.87
Trim58Q5NCC9 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Trim58Q5NCC9 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Trim58Q5NCC9 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Trim58Q5NCC9 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Trim58Q5NCC9 Gm24831-201ENSMUST00000116778 126 ntBASIC3.39□□□□□ -1.87
Trim58Q5NCC9 Gm6429-201ENSMUST00000117144 475 ntBASIC3.39□□□□□ -1.87
Trim58Q5NCC9 Gm12897-201ENSMUST00000120341 250 ntBASIC3.39□□□□□ -1.87
Trim58Q5NCC9 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC3.39□□□□□ -1.87
Trim58Q5NCC9 Gm23032-201ENSMUST00000157995 107 ntBASIC3.39□□□□□ -1.87
Trim58Q5NCC9 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Trim58Q5NCC9 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Trim58Q5NCC9 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC3.39□□□□□ -1.87
Trim58Q5NCC9 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Trim58Q5NCC9 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC3.39□□□□□ -1.87
Trim58Q5NCC9 Gm37866-201ENSMUST00000191950 696 ntBASIC3.39□□□□□ -1.87
Trim58Q5NCC9 Gm37616-201ENSMUST00000193974 322 ntBASIC3.39□□□□□ -1.87
Trim58Q5NCC9 Gm5551-201ENSMUST00000199720 690 ntBASIC3.39□□□□□ -1.87
Trim58Q5NCC9 Gm7726-201ENSMUST00000206241 231 ntBASIC3.39□□□□□ -1.87
Trim58Q5NCC9 Gm9628-201ENSMUST00000222169 725 ntBASIC3.39□□□□□ -1.87
Trim58Q5NCC9 AC154224.1-201ENSMUST00000224367 403 ntBASIC3.39□□□□□ -1.87
Trim58Q5NCC9 AC131085.1-201ENSMUST00000224746 656 ntBASIC3.39□□□□□ -1.87
Trim58Q5NCC9 AC164597.2-201ENSMUST00000226738 603 ntBASIC3.39□□□□□ -1.87
Trim58Q5NCC9 AC154484.1-201ENSMUST00000227311 771 ntBASIC3.39□□□□□ -1.87
Trim58Q5NCC9 AC168062.2-201ENSMUST00000228907 422 ntBASIC3.39□□□□□ -1.87
Trim58Q5NCC9 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Trim58Q5NCC9 Gm23847-201ENSMUST00000083829 110 ntBASIC3.39□□□□□ -1.87
Trim58Q5NCC9 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.39□□□□□ -1.87
Trim58Q5NCC9 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Trim58Q5NCC9 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
Trim58Q5NCC9 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC3.38□□□□□ -1.87
Trim58Q5NCC9 Gm25539-201ENSMUST00000116886 122 ntBASIC3.38□□□□□ -1.87
Trim58Q5NCC9 Gm22091-201ENSMUST00000116908 127 ntBASIC3.38□□□□□ -1.87
Trim58Q5NCC9 Gm11582-201ENSMUST00000121041 236 ntBASIC3.38□□□□□ -1.87
Trim58Q5NCC9 Gm11456-201ENSMUST00000121070 256 ntBASIC3.38□□□□□ -1.87
Trim58Q5NCC9 Gm22107-201ENSMUST00000122548 100 ntBASIC3.38□□□□□ -1.87
Trim58Q5NCC9 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trim58Q5NCC9 Gm16533-201ENSMUST00000140035 228 ntBASIC3.38□□□□□ -1.87
Trim58Q5NCC9 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trim58Q5NCC9 Gm8161-201ENSMUST00000168739 481 ntBASIC3.38□□□□□ -1.87
Trim58Q5NCC9 Gm27659-201ENSMUST00000183472 98 ntBASIC3.38□□□□□ -1.87
Trim58Q5NCC9 Gm27527-201ENSMUST00000183903 99 ntBASIC3.38□□□□□ -1.87
Trim58Q5NCC9 Mir7658-201ENSMUST00000184043 57 ntBASIC3.38□□□□□ -1.87
Trim58Q5NCC9 Mir6401-201ENSMUST00000184499 109 ntBASIC3.38□□□□□ -1.87
Trim58Q5NCC9 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC3.38□□□□□ -1.87
Trim58Q5NCC9 Mir9-1-201ENSMUST00000199907 89 ntBASIC3.38□□□□□ -1.87
Trim58Q5NCC9 Gm17838-201ENSMUST00000205872 876 ntBASIC3.38□□□□□ -1.87
Trim58Q5NCC9 Gm29884-201ENSMUST00000218403 453 ntBASIC3.38□□□□□ -1.87
Trim58Q5NCC9 Gm5175-202ENSMUST00000219699 529 ntBASIC3.38□□□□□ -1.87
Trim58Q5NCC9 AC141642.1-201ENSMUST00000220598 229 ntBASIC3.38□□□□□ -1.87
Trim58Q5NCC9 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Trim58Q5NCC9 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Trim58Q5NCC9 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
Trim58Q5NCC9 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Trim58Q5NCC9 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Trim58Q5NCC9 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Trim58Q5NCC9 Gm22960-201ENSMUST00000122517 104 ntBASIC3.37□□□□□ -1.87
Trim58Q5NCC9 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Trim58Q5NCC9 Gm24291-201ENSMUST00000157633 162 ntBASIC3.37□□□□□ -1.87
Trim58Q5NCC9 Gm3370-201ENSMUST00000171785 500 ntBASIC3.37□□□□□ -1.87
Trim58Q5NCC9 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC3.37□□□□□ -1.87
Trim58Q5NCC9 Mir6393-201ENSMUST00000183709 94 ntBASIC3.37□□□□□ -1.87
Trim58Q5NCC9 Mir8118-201ENSMUST00000183962 129 ntBASIC3.37□□□□□ -1.87
Trim58Q5NCC9 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.37□□□□□ -1.87
Trim58Q5NCC9 Gm30341-201ENSMUST00000194363 289 ntBASIC3.37□□□□□ -1.87
Trim58Q5NCC9 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC3.37□□□□□ -1.87
Trim58Q5NCC9 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC3.37□□□□□ -1.87
Trim58Q5NCC9 Gm4528-201ENSMUST00000207905 551 ntBASIC3.37□□□□□ -1.87
Trim58Q5NCC9 AC156795.1-201ENSMUST00000214655 414 ntBASIC3.37□□□□□ -1.87
Trim58Q5NCC9 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC3.37□□□□□ -1.87
Trim58Q5NCC9 AC154552.4-201ENSMUST00000222171 151 ntBASIC3.37□□□□□ -1.87
Trim58Q5NCC9 AC167192.4-201ENSMUST00000224087 993 ntBASIC3.37□□□□□ -1.87
Trim58Q5NCC9 Gm6030-201ENSMUST00000078768 402 ntBASIC3.37□□□□□ -1.87
Trim58Q5NCC9 Gm24707-201ENSMUST00000082812 107 ntBASIC3.37□□□□□ -1.87
Trim58Q5NCC9 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.37□□□□□ -1.87
Trim58Q5NCC9 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Trim58Q5NCC9 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Trim58Q5NCC9 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.36□□□□□ -1.87
Trim58Q5NCC9 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Trim58Q5NCC9 Gm26002-201ENSMUST00000101915 107 ntBASIC3.36□□□□□ -1.87
Trim58Q5NCC9 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC3.36□□□□□ -1.87
Trim58Q5NCC9 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC3.36□□□□□ -1.87
Trim58Q5NCC9 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC3.36□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 128.9 ms