Protein–RNA interactions for Protein: Q04693

RSE1, Pre-mRNA-splicing factor RSE1, yeastyeast

Known RBP Predictions only

Length 1,361 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSE1Q04693 tQ(UUG)QtQ(UUG)Q 76 nt2.91□□□□□ -1.94
RSE1Q04693 NUP145YGL092W 3954 nt2.9□□□□□ -1.95
RSE1Q04693 SWI4YER111C 3282 nt2.9□□□□□ -1.95
RSE1Q04693 YOR093CYOR093C 4947 nt2.88□□□□□ -1.95
RSE1Q04693 MEC1YBR136W 7107 nt2.87□□□□□ -1.95
RSE1Q04693 PSD2YGR170W 3417 nt2.87□□□□□ -1.95
RSE1Q04693 LAA1YJL207C 6045 nt2.86□□□□□ -1.95
RSE1Q04693 YDL114W-AYDL114W-A 114 nt2.85□□□□□ -1.95
RSE1Q04693 IRA2YOL081W 9240 nt2.84□□□□□ -1.95
RSE1Q04693 TOR2YKL203C 7425 nt2.83□□□□□ -1.96
RSE1Q04693 CFT1YDR301W 4074 nt2.83□□□□□ -1.96
RSE1Q04693 ATG9YDL149W 2994 nt2.81□□□□□ -1.96
RSE1Q04693 YER090C-AYER090C-A 90 nt2.81□□□□□ -1.96
RSE1Q04693 BPH1YCR032W 6504 nt2.8□□□□□ -1.96
RSE1Q04693 SPC110YDR356W 2835 nt2.78□□□□□ -1.96
RSE1Q04693 YLL006W-AYLL006W-A 177 nt2.77□□□□□ -1.97
RSE1Q04693 IRA1YBR140C 9279 nt2.76□□□□□ -1.97
RSE1Q04693 TRM732YMR259C 4263 nt2.75□□□□□ -1.97
RSE1Q04693 YOL014WYOL014W 375 nt2.74□□□□□ -1.97
RSE1Q04693 tV(UAC)QtV(UAC)Q 76 nt2.74□□□□□ -1.97
RSE1Q04693 IML1YJR138W 4755 nt2.73□□□□□ -1.97
RSE1Q04693 snR40snR40 97 nt2.72□□□□□ -1.97
RSE1Q04693 YPR117WYPR117W 7470 nt2.7□□□□□ -1.98
RSE1Q04693 YHR214C-BYHR214C-B 5382 nt2.69□□□□□ -1.98
RSE1Q04693 DOP1YDR141C 5097 nt2.69□□□□□ -1.98
RSE1Q04693 FIG2YCR089W 4830 nt2.67□□□□□ -1.98
RSE1Q04693 VPS15YBR097W 4365 nt2.66□□□□□ -1.98
RSE1Q04693 UTP20YBL004W 7482 nt2.66□□□□□ -1.98
RSE1Q04693 MLP2YIL149C 5040 nt2.65□□□□□ -1.99
RSE1Q04693 MON2YNL297C 4911 nt2.64□□□□□ -1.99
RSE1Q04693 YHR180W-AYHR180W-A 183 nt2.61□□□□□ -1.99
RSE1Q04693 NUP188YML103C 4968 nt2.6□□□□□ -1.99
RSE1Q04693 YNL054W-BYNL054W-B 5250 nt2.6□□□□□ -1.99
RSE1Q04693 snR67snR67 82 nt2.6□□□□□ -1.99
RSE1Q04693 YNL284C-BYNL284C-B 5268 nt2.59□□□□□ -2
RSE1Q04693 CDC39YCR093W 6327 nt2.59□□□□□ -2
RSE1Q04693 YKL106C-AYKL106C-A 120 nt2.57□□□□□ -2
RSE1Q04693 USO1YDL058W 5373 nt2.57□□□□□ -2
RSE1Q04693 YMR045CYMR045C 5268 nt2.48□□□□□ -2.01
RSE1Q04693 BST1YFL025C 3090 nt2.48□□□□□ -2.01
RSE1Q04693 SPT7YBR081C 3999 nt2.46□□□□□ -2.02
RSE1Q04693 YMR160WYMR160W 2451 nt2.43□□□□□ -2.02
RSE1Q04693 tH(GUG)E1tH(GUG)E1 72 nt2.43□□□□□ -2.02
RSE1Q04693 tH(GUG)E2tH(GUG)E2 72 nt2.43□□□□□ -2.02
RSE1Q04693 tH(GUG)G1tH(GUG)G1 72 nt2.43□□□□□ -2.02
RSE1Q04693 tH(GUG)G2tH(GUG)G2 72 nt2.43□□□□□ -2.02
RSE1Q04693 tH(GUG)HtH(GUG)H 72 nt2.43□□□□□ -2.02
RSE1Q04693 tH(GUG)KtH(GUG)K 72 nt2.43□□□□□ -2.02
RSE1Q04693 tH(GUG)MtH(GUG)M 72 nt2.43□□□□□ -2.02
RSE1Q04693 TMA7YLR262C-A 195 nt2.43□□□□□ -2.02
RSE1Q04693 YMR247W-AYMR247W-A 144 nt2.39□□□□□ -2.03
RSE1Q04693 tV(UAC)BtV(UAC)B 74 nt2.34□□□□□ -2.04
RSE1Q04693 tV(UAC)DtV(UAC)D 74 nt2.34□□□□□ -2.04
RSE1Q04693 VAM6YDL077C 3150 nt2.3□□□□□ -2.04
RSE1Q04693 tT(UGU)HtT(UGU)H 72 nt2.18□□□□□ -2.06
RSE1Q04693 tQ(UUG)E2tQ(UUG)E2 72 nt2.15□□□□□ -2.07
RSE1Q04693 YKL145W-AYKL145W-A 93 nt2.14□□□□□ -2.07
RSE1Q04693 HKR1YDR420W 5409 nt2.14□□□□□ -2.07
RSE1Q04693 YOR192C-BYOR192C-B 5313 nt2.08□□□□□ -2.08
RSE1Q04693 snR77snR77 88 nt2.06□□□□□ -2.08
RSE1Q04693 YOR316C-AYOR316C-A 210 nt2.01□□□□□ -2.09
RSE1Q04693 RKR1YMR247C 4689 nt1.91□□□□□ -2.1
RSE1Q04693 LTE1YAL024C 4308 nt1.91□□□□□ -2.1
RSE1Q04693 MYO1YHR023W 5787 nt1.91□□□□□ -2.1
RSE1Q04693 BEM2YER155C 6504 nt1.89□□□□□ -2.11
RSE1Q04693 SBH2YER019C-A 267 nt1.86□□□□□ -2.11
RSE1Q04693 YBL100W-BYBL100W-B 5313 nt1.85□□□□□ -2.11
RSE1Q04693 SOV1YMR066W 2697 nt1.8□□□□□ -2.12
RSE1Q04693 SCC2YDR180W 4482 nt1.76□□□□□ -2.13
RSE1Q04693 BUD3YCL014W 4911 nt1.75□□□□□ -2.13
RSE1Q04693 YJR029WYJR029W 5268 nt1.71□□□□□ -2.14
RSE1Q04693 YML100W-AYML100W-A 174 nt1.71□□□□□ -2.14
RSE1Q04693 YPR137C-BYPR137C-B 5268 nt1.65□□□□□ -2.15
RSE1Q04693 THO2YNL139C 4794 nt1.6□□□□□ -2.15
RSE1Q04693 MLP1YKR095W 5628 nt1.58□□□□□ -2.16
RSE1Q04693 IQG1YPL242C 4488 nt1.47□□□□□ -2.17
RSE1Q04693 YOR186C-AYOR186C-A 210 nt1.45□□□□□ -2.18
RSE1Q04693 YJL113WYJL113W 4647 nt1.44□□□□□ -2.18
RSE1Q04693 FMP27YLR454W 7887 nt1.4□□□□□ -2.18
RSE1Q04693 ESP1YGR098C 4893 nt1.39□□□□□ -2.19
RSE1Q04693 tT(AGU)BtT(AGU)B 73 nt1.33□□□□□ -2.2
RSE1Q04693 tT(AGU)CtT(AGU)C 73 nt1.33□□□□□ -2.2
RSE1Q04693 tT(AGU)DtT(AGU)D 73 nt1.33□□□□□ -2.2
RSE1Q04693 tT(AGU)HtT(AGU)H 73 nt1.33□□□□□ -2.2
RSE1Q04693 tT(AGU)I1tT(AGU)I1 73 nt1.33□□□□□ -2.2
RSE1Q04693 tT(AGU)I2tT(AGU)I2 73 nt1.33□□□□□ -2.2
RSE1Q04693 tT(AGU)JtT(AGU)J 73 nt1.33□□□□□ -2.2
RSE1Q04693 tT(AGU)N1tT(AGU)N1 73 nt1.33□□□□□ -2.2
RSE1Q04693 tT(AGU)N2tT(AGU)N2 73 nt1.33□□□□□ -2.2
RSE1Q04693 tT(AGU)O1tT(AGU)O1 73 nt1.33□□□□□ -2.2
RSE1Q04693 tT(AGU)O2tT(AGU)O2 73 nt1.33□□□□□ -2.2
RSE1Q04693 tC(GCA)QtC(GCA)Q 76 nt1.22□□□□□ -2.21
RSE1Q04693 EMT1tM(CAU)D 73 nt1.16□□□□□ -2.22
RSE1Q04693 EMT5tM(CAU)J1 73 nt1.16□□□□□ -2.22
RSE1Q04693 EMT3tM(CAU)J2 73 nt1.16□□□□□ -2.22
RSE1Q04693 EMT4tM(CAU)M 73 nt1.16□□□□□ -2.22
RSE1Q04693 EMT2tM(CAU)O2 73 nt1.16□□□□□ -2.22
RSE1Q04693 PAU9YBL108C-A 129 nt1.15□□□□□ -2.23
RSE1Q04693 YMR272W-AYMR272W-A 114 nt1.06□□□□□ -2.24
RSE1Q04693 RPL41BYDL133C-A 78 nt1.02□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 40.3 ms