Protein–RNA interactions for Protein: P49588

AARS, Alanine--tRNA ligase, cytoplasmic, humanhuman

Known RBP eCLIP

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AARSP49588 BCAT1-204ENST00000538118 4694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.716e-8■■□□□ 11.4
AARSP49588 EIF5B-201ENST00000289371 5777 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.834e-7■■□□□ 11.4
AARSP49588 BCAT1-206ENST00000539780 1360 ntTSL 2 BASIC9.29□□□□□ -0.926e-8■■□□□ 11.4
AARSP49588 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC8.88□□□□□ -0.996e-8■■□□□ 11.4
AARSP49588 BCAT1-207ENST00000543099 568 ntTSL 44.47□□□□□ -1.696e-8■■□□□ 11.4
AARSP49588 COPB1-209ENST00000533096 547 ntTSL 414.12□□□□□ -0.154e-7■□□□□ 11.3
AARSP49588 COPB1-206ENST00000529210 607 ntTSL 413.14□□□□□ -0.314e-7■□□□□ 11.3
AARSP49588 COPB1-207ENST00000529866 729 ntTSL 211.33□□□□□ -0.64e-7■□□□□ 11.3
AARSP49588 COPB1-201ENST00000249923 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.624e-7■□□□□ 11.3
AARSP49588 COPB1-202ENST00000439561 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.84e-7■□□□□ 11.3
AARSP49588 COPB1-211ENST00000534234 1584 ntTSL 59.67□□□□□ -0.864e-7■□□□□ 11.3
AARSP49588 COPB1-210ENST00000533533 537 ntTSL 49.4□□□□□ -0.94e-7■□□□□ 11.3
AARSP49588 XIST-206ENST00000434839 2865 ntTSL 5 BASIC9.29□□□□□ -0.924e-7■□□□□ 11.3
AARSP49588 XIST-202ENST00000417942 724 ntTSL 36.84□□□□□ -1.314e-7■□□□□ 11.3
AARSP49588 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.364e-7■□□□□ 11.3
AARSP49588 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.47□□□□□ -1.374e-7■□□□□ 11.3
AARSP49588 NPM1-211ENST00000523622 247 ntTSL 36.47□□□□□ -1.374e-7■□□□□ 11.3
AARSP49588 NPM1-210ENST00000523339 268 ntTSL 24□□□□□ -1.774e-7■□□□□ 11.3
AARSP49588 XIST-203ENST00000421322 446 ntTSL 23.01□□□□□ -1.934e-7■□□□□ 11.3
AARSP49588 COPB1-212ENST00000534771 576 ntTSL 40.76□□□□□ -2.294e-7■□□□□ 11.3
AARSP49588 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.12■□□□□ 0.173e-6■□□□□ 11.3
AARSP49588 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.153e-6■□□□□ 11.3
AARSP49588 RPL23A-205ENST00000472628 639 ntTSL 1 (best) BASIC11.97□□□□□ -0.493e-6■□□□□ 11.3
AARSP49588 RPL23A-202ENST00000394935 580 ntTSL 310.62□□□□□ -0.713e-6■□□□□ 11.3
AARSP49588 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC8.45□□□□□ -1.063e-6■□□□□ 11.3
AARSP49588 RPL23A-201ENST00000355731 587 ntTSL 56.67□□□□□ -1.343e-6■□□□□ 11.3
AARSP49588 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.55■□□□□ 0.881e-7■□□□□ 11.2
AARSP49588 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.34■□□□□ 0.531e-7■□□□□ 11.2
AARSP49588 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.211e-7■□□□□ 11.2
AARSP49588 INSIG1-206ENST00000476756 1320 ntTSL 212.38□□□□□ -0.431e-7■□□□□ 11.2
AARSP49588 SRRM2-225ENST00000576076 914 nt18.08■□□□□ 0.483e-11■□□□□ 11.2
AARSP49588 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC15.05■□□□□ -03e-11■□□□□ 11.2
AARSP49588 SRRM2-212ENST00000572952 1118 ntTSL 214.27□□□□□ -0.133e-11■□□□□ 11.2
AARSP49588 SRRM2-209ENST00000572278 711 ntTSL 210.32□□□□□ -0.763e-11■□□□□ 11.2
AARSP49588 SRRM2-215ENST00000573498 994 ntTSL 36.15□□□□□ -1.423e-11■□□□□ 11.2
AARSP49588 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.65■■□□□ 1.867e-6■□□□□ 11.2
AARSP49588 TANGO2-222ENST00000479679 894 ntTSL 226.11■■□□□ 1.777e-6■□□□□ 11.2
AARSP49588 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.01■■□□□ 1.597e-6■□□□□ 11.2
AARSP49588 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.51■■□□□ 1.517e-6■□□□□ 11.2
AARSP49588 TANGO2-208ENST00000430807 733 ntTSL 324.48■■□□□ 1.517e-6■□□□□ 11.2
AARSP49588 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.477e-6■□□□□ 11.2
AARSP49588 TANGO2-215ENST00000450019 1689 ntTSL 524.15■■□□□ 1.467e-6■□□□□ 11.2
AARSP49588 TANGO2-206ENST00000411907 568 ntTSL 423.85■■□□□ 1.417e-6■□□□□ 11.2
AARSP49588 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.397e-6■□□□□ 11.2
AARSP49588 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.26■■□□□ 1.317e-6■□□□□ 11.2
AARSP49588 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.85■■□□□ 1.257e-6■□□□□ 11.2
AARSP49588 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.35■■□□□ 1.177e-6■□□□□ 11.2
AARSP49588 GPAA1-207ENST00000526341 557 ntTSL 522.18■■□□□ 1.147e-6■□□□□ 11.2
AARSP49588 GPAA1-211ENST00000529503 878 ntTSL 522.18■■□□□ 1.147e-6■□□□□ 11.2
AARSP49588 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.85■■□□□ 1.097e-6■□□□□ 11.2
AARSP49588 GPAA1-210ENST00000528073 986 ntTSL 321.85■■□□□ 1.097e-6■□□□□ 11.2
AARSP49588 GPAA1-213ENST00000530258 535 ntTSL 421.73■■□□□ 1.077e-6■□□□□ 11.2
AARSP49588 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.58■■□□□ 1.047e-6■□□□□ 11.2
AARSP49588 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.047e-6■□□□□ 11.2
AARSP49588 KCNH2-204ENST00000461280 2430 ntTSL 1 (best)21.45■■□□□ 1.027e-6■□□□□ 11.2
AARSP49588 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.35■■□□□ 1.017e-6■□□□□ 11.2
AARSP49588 GPAA1-204ENST00000525087 937 ntTSL 521.33■■□□□ 1.017e-6■□□□□ 11.2
AARSP49588 GPAA1-217ENST00000532758 1079 ntTSL 321.33■■□□□ 1.017e-6■□□□□ 11.2
AARSP49588 GPAA1-214ENST00000530633 835 ntTSL 321.24■□□□□ 0.997e-6■□□□□ 11.2
AARSP49588 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.97e-6■□□□□ 11.2
AARSP49588 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.44■□□□□ 0.867e-6■□□□□ 11.2
AARSP49588 TANGO2-211ENST00000434168 862 ntTSL 320.35■□□□□ 0.857e-6■□□□□ 11.2
AARSP49588 KCNH2-205ENST00000473610 2782 ntTSL 220.25■□□□□ 0.837e-6■□□□□ 11.2
AARSP49588 GPAA1-205ENST00000525308 903 ntTSL 219.87■□□□□ 0.777e-6■□□□□ 11.2
AARSP49588 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.767e-6■□□□□ 11.2
AARSP49588 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.767e-6■□□□□ 11.2
AARSP49588 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.717e-6■□□□□ 11.2
AARSP49588 STXBP3-202ENST00000469338 294 ntTSL 219.22■□□□□ 0.677e-6■□□□□ 11.2
AARSP49588 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.13■□□□□ 0.657e-6■□□□□ 11.2
AARSP49588 MAP4K5-209ENST00000557390 545 ntTSL 318.95■□□□□ 0.627e-6■□□□□ 11.2
AARSP49588 TANGO2-216ENST00000450664 570 ntTSL 418.88■□□□□ 0.617e-6■□□□□ 11.2
AARSP49588 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.49■□□□□ 0.557e-6■□□□□ 11.2
AARSP49588 DDX17-203ENST00000403230 2322 ntAPPRIS ALT2 TSL 1 (best)18.31■□□□□ 0.527e-6■□□□□ 11.2
AARSP49588 TCF25-204ENST00000561958 763 ntTSL 318.16■□□□□ 0.57e-6■□□□□ 11.2
AARSP49588 TCF25-222ENST00000568412 797 ntTSL 318.16■□□□□ 0.57e-6■□□□□ 11.2
AARSP49588 TANGO2-203ENST00000399807 2241 ntTSL 518.13■□□□□ 0.497e-6■□□□□ 11.2
AARSP49588 STXBP3-204ENST00000483586 561 ntTSL 218.12■□□□□ 0.497e-6■□□□□ 11.2
AARSP49588 SUN1-222ENST00000457861 2975 ntTSL 217.88■□□□□ 0.457e-6■□□□□ 11.2
AARSP49588 TANGO2-219ENST00000471707 745 ntTSL 517.59■□□□□ 0.417e-6■□□□□ 11.2
AARSP49588 TANGO2-218ENST00000462579 649 ntTSL 417.58■□□□□ 0.47e-6■□□□□ 11.2
AARSP49588 GPAA1-203ENST00000524418 825 ntTSL 317.48■□□□□ 0.397e-6■□□□□ 11.2
AARSP49588 CLASRP-202ENST00000391952 2213 ntTSL 1 (best)17.11■□□□□ 0.337e-6■□□□□ 11.2
AARSP49588 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.247e-6■□□□□ 11.2
AARSP49588 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.217e-6■□□□□ 11.2
AARSP49588 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.02■□□□□ 0.167e-6■□□□□ 11.2
AARSP49588 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.137e-6■□□□□ 11.2
AARSP49588 LRPPRC-205ENST00000447246 1209 ntTSL 1 (best)15.67■□□□□ 0.17e-6■□□□□ 11.2
AARSP49588 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.057e-6■□□□□ 11.2
AARSP49588 MAP4K5-203ENST00000554091 619 ntTSL 315.3■□□□□ 0.047e-6■□□□□ 11.2
AARSP49588 TANGO2-213ENST00000444651 847 ntTSL 315.26■□□□□ 0.037e-6■□□□□ 11.2
AARSP49588 GPAA1-208ENST00000527144 767 ntTSL 315.07■□□□□ 07e-6■□□□□ 11.2
AARSP49588 TCF25-223ENST00000568870 263 ntTSL 214.92□□□□□ -0.027e-6■□□□□ 11.2
AARSP49588 ABCA7-209ENST00000526885 1076 ntTSL 1 (best)14.9□□□□□ -0.027e-6■□□□□ 11.2
AARSP49588 TANGO2-224ENST00000485715 617 ntTSL 514.68□□□□□ -0.067e-6■□□□□ 11.2
AARSP49588 TOP2B-203ENST00000424225 3525 ntTSL 1 (best)14.66□□□□□ -0.067e-6■□□□□ 11.2
AARSP49588 APEX1-205ENST00000553555 1603 ntTSL 1 (best)14.65□□□□□ -0.067e-6■□□□□ 11.2
AARSP49588 APEX1-208ENST00000554813 654 ntTSL 314.32□□□□□ -0.127e-6■□□□□ 11.2
AARSP49588 APEX1-211ENST00000555839 952 ntTSL 214.32□□□□□ -0.127e-6■□□□□ 11.2
AARSP49588 APEX1-216ENST00000557159 1803 ntTSL 214.31□□□□□ -0.127e-6■□□□□ 11.2
AARSP49588 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.127e-6■□□□□ 11.2
Retrieved 100 of 8,200 protein–RNA pairs in 128.7 ms