Protein–RNA interactions for Protein: P43639

CKB1, Casein kinase II subunit beta, yeastyeast

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CKB1P43639 SPC110YDR356W 2835 nt1.81□□□□□ -2.12
CKB1P43639 tQ(UUG)E2tQ(UUG)E2 72 nt1.81□□□□□ -2.12
CKB1P43639 SPT7YBR081C 3999 nt1.78□□□□□ -2.12
CKB1P43639 tV(UAC)BtV(UAC)B 74 nt1.77□□□□□ -2.13
CKB1P43639 tV(UAC)DtV(UAC)D 74 nt1.77□□□□□ -2.13
CKB1P43639 IRA1YBR140C 9279 nt1.77□□□□□ -2.13
CKB1P43639 NIP1YMR309C 2439 nt1.76□□□□□ -2.13
CKB1P43639 PAU12YGR294W 363 nt1.76□□□□□ -2.13
CKB1P43639 PAU24YBR301W 363 nt1.76□□□□□ -2.13
CKB1P43639 SIP4YJL089W 2490 nt1.75□□□□□ -2.13
CKB1P43639 YJL077W-AYJL077W-A 87 nt1.74□□□□□ -2.13
CKB1P43639 BUL2YML111W 2763 nt1.72□□□□□ -2.13
CKB1P43639 HKR1YDR420W 5409 nt1.7□□□□□ -2.14
CKB1P43639 YKL225WYKL225W 348 nt1.69□□□□□ -2.14
CKB1P43639 YML054C-AYML054C-A 159 nt1.68□□□□□ -2.14
CKB1P43639 YNL284C-BYNL284C-B 5268 nt1.66□□□□□ -2.14
CKB1P43639 YHR180C-BYHR180C-B 105 nt1.65□□□□□ -2.15
CKB1P43639 YBR109W-AYBR109W-A 225 nt1.64□□□□□ -2.15
CKB1P43639 snR50snR50 90 nt1.62□□□□□ -2.15
CKB1P43639 FYV8YGR196C 2454 nt1.62□□□□□ -2.15
CKB1P43639 RKR1YMR247C 4689 nt1.59□□□□□ -2.15
CKB1P43639 RPL41AYDL184C 78 nt1.58□□□□□ -2.16
CKB1P43639 YPR117WYPR117W 7470 nt1.57□□□□□ -2.16
CKB1P43639 tQ(UUG)QtQ(UUG)Q 76 nt1.57□□□□□ -2.16
CKB1P43639 YBR296C-AYBR296C-A 120 nt1.55□□□□□ -2.16
CKB1P43639 SCC2YDR180W 4482 nt1.53□□□□□ -2.16
CKB1P43639 snR38snR38 95 nt1.52□□□□□ -2.17
CKB1P43639 YOR192C-BYOR192C-B 5313 nt1.51□□□□□ -2.17
CKB1P43639 YNL054W-BYNL054W-B 5250 nt1.48□□□□□ -2.17
CKB1P43639 tF(GAA)BtF(GAA)B 73 nt1.48□□□□□ -2.17
CKB1P43639 tF(GAA)FtF(GAA)F 73 nt1.48□□□□□ -2.17
CKB1P43639 tF(GAA)GtF(GAA)G 73 nt1.48□□□□□ -2.17
CKB1P43639 tF(GAA)H1tF(GAA)H1 73 nt1.48□□□□□ -2.17
CKB1P43639 tF(GAA)H2tF(GAA)H2 73 nt1.48□□□□□ -2.17
CKB1P43639 tF(GAA)MtF(GAA)M 73 nt1.48□□□□□ -2.17
CKB1P43639 tF(GAA)P1tF(GAA)P1 73 nt1.48□□□□□ -2.17
CKB1P43639 tF(GAA)P2tF(GAA)P2 73 nt1.48□□□□□ -2.17
CKB1P43639 BUD3YCL014W 4911 nt1.47□□□□□ -2.17
CKB1P43639 AI1Q0050 2505 nt1.45□□□□□ -2.18
CKB1P43639 YER090C-AYER090C-A 90 nt1.44□□□□□ -2.18
CKB1P43639 LTE1YAL024C 4308 nt1.42□□□□□ -2.18
CKB1P43639 YDR371C-AYDR371C-A 105 nt1.41□□□□□ -2.18
CKB1P43639 BEM2YER155C 6504 nt1.41□□□□□ -2.18
CKB1P43639 PET111YMR257C 2403 nt1.36□□□□□ -2.19
CKB1P43639 VAM6YDL077C 3150 nt1.36□□□□□ -2.19
CKB1P43639 MYO1YHR023W 5787 nt1.32□□□□□ -2.2
CKB1P43639 SKI7YOR076C 2244 nt1.32□□□□□ -2.2
CKB1P43639 YDL159W-AYDL159W-A 132 nt1.31□□□□□ -2.2
CKB1P43639 YLR149C-AYLR149C-A 87 nt1.27□□□□□ -2.21
CKB1P43639 DOP1YDR141C 5097 nt1.27□□□□□ -2.21
CKB1P43639 YOL014WYOL014W 375 nt1.26□□□□□ -2.21
CKB1P43639 YBL100W-BYBL100W-B 5313 nt1.24□□□□□ -2.21
CKB1P43639 EMT1tM(CAU)D 73 nt1.23□□□□□ -2.21
CKB1P43639 EMT5tM(CAU)J1 73 nt1.23□□□□□ -2.21
CKB1P43639 EMT3tM(CAU)J2 73 nt1.23□□□□□ -2.21
CKB1P43639 EMT4tM(CAU)M 73 nt1.23□□□□□ -2.21
CKB1P43639 EMT2tM(CAU)O2 73 nt1.23□□□□□ -2.21
CKB1P43639 UTP20YBL004W 7482 nt1.22□□□□□ -2.21
CKB1P43639 snR67snR67 82 nt1.21□□□□□ -2.22
CKB1P43639 YGR122C-AYGR122C-A 129 nt1.19□□□□□ -2.22
CKB1P43639 YMR160WYMR160W 2451 nt1.18□□□□□ -2.22
CKB1P43639 YKL096C-BYKL096C-B 150 nt1.15□□□□□ -2.23
CKB1P43639 MLP1YKR095W 5628 nt1.15□□□□□ -2.23
CKB1P43639 YKL145W-AYKL145W-A 93 nt1.14□□□□□ -2.23
CKB1P43639 YJR029WYJR029W 5268 nt1.08□□□□□ -2.24
CKB1P43639 YPR137C-BYPR137C-B 5268 nt1.08□□□□□ -2.24
CKB1P43639 tT(AGU)BtT(AGU)B 73 nt1.08□□□□□ -2.24
CKB1P43639 tT(AGU)CtT(AGU)C 73 nt1.08□□□□□ -2.24
CKB1P43639 tT(AGU)DtT(AGU)D 73 nt1.08□□□□□ -2.24
CKB1P43639 tT(AGU)HtT(AGU)H 73 nt1.08□□□□□ -2.24
CKB1P43639 tT(AGU)I1tT(AGU)I1 73 nt1.08□□□□□ -2.24
CKB1P43639 tT(AGU)I2tT(AGU)I2 73 nt1.08□□□□□ -2.24
CKB1P43639 tT(AGU)JtT(AGU)J 73 nt1.08□□□□□ -2.24
CKB1P43639 tT(AGU)N1tT(AGU)N1 73 nt1.08□□□□□ -2.24
CKB1P43639 tT(AGU)N2tT(AGU)N2 73 nt1.08□□□□□ -2.24
CKB1P43639 tT(AGU)O1tT(AGU)O1 73 nt1.08□□□□□ -2.24
CKB1P43639 tT(AGU)O2tT(AGU)O2 73 nt1.08□□□□□ -2.24
CKB1P43639 MLP2YIL149C 5040 nt1.08□□□□□ -2.24
CKB1P43639 IQG1YPL242C 4488 nt1.01□□□□□ -2.25
CKB1P43639 YPR159C-AYPR159C-A 102 nt0.97□□□□□ -2.25
CKB1P43639 YOR186C-AYOR186C-A 210 nt0.96□□□□□ -2.26
CKB1P43639 FMP27YLR454W 7887 nt0.86□□□□□ -2.27
CKB1P43639 YKL106C-AYKL106C-A 120 nt0.85□□□□□ -2.27
CKB1P43639 snR75snR75 89 nt0.83□□□□□ -2.28
CKB1P43639 YML100W-AYML100W-A 174 nt0.83□□□□□ -2.28
CKB1P43639 UTP10YJL109C 5310 nt0.82□□□□□ -2.28
CKB1P43639 YER078W-AYER078W-A 165 nt0.79□□□□□ -2.28
CKB1P43639 SOV1YMR066W 2697 nt0.74□□□□□ -2.29
CKB1P43639 YMR272W-AYMR272W-A 114 nt0.71□□□□□ -2.3
CKB1P43639 YDL114W-AYDL114W-A 114 nt0.69□□□□□ -2.3
CKB1P43639 ESP1YGR098C 4893 nt0.67□□□□□ -2.3
CKB1P43639 tV(UAC)QtV(UAC)Q 76 nt0.6□□□□□ -2.31
CKB1P43639 YOR376W-AYOR376W-A 156 nt0.57□□□□□ -2.32
CKB1P43639 snR128snR128 126 nt0.51□□□□□ -2.33
CKB1P43639 YOL013W-AYOL013W-A 192 nt0.5□□□□□ -2.33
CKB1P43639 THO2YNL139C 4794 nt0.46□□□□□ -2.34
CKB1P43639 YOR316C-AYOR316C-A 210 nt0.46□□□□□ -2.34
CKB1P43639 PAU9YBL108C-A 129 nt0.39□□□□□ -2.35
CKB1P43639 snR77snR77 88 nt0.34□□□□□ -2.36
CKB1P43639 SBH2YER019C-A 267 nt0.34□□□□□ -2.36
Retrieved 100 of 7,029 protein–RNA pairs in 42.1 ms