Protein–RNA interactions for Protein: P43574

GAT1, Transcriptional regulatory protein GAT1, yeastyeast

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
GAT1P43574 tV(UAC)DtV(UAC)D 74 nt1.1□□□□□ -2.23
GAT1P43574 NST1YNL091W 3723 nt1.1□□□□□ -2.23
GAT1P43574 EST1YLR233C 2100 nt1.1□□□□□ -2.23
GAT1P43574 MYO1YHR023W 5787 nt1.09□□□□□ -2.24
GAT1P43574 BEM2YER155C 6504 nt1.08□□□□□ -2.24
GAT1P43574 YSP1YHR155W 3687 nt1.08□□□□□ -2.24
GAT1P43574 ULP2YIL031W 3105 nt1.07□□□□□ -2.24
GAT1P43574 DOP1YDR141C 5097 nt1.07□□□□□ -2.24
GAT1P43574 YLR299C-AYLR299C-A 93 nt1.07□□□□□ -2.24
GAT1P43574 YPL060C-AYPL060C-A 3315 nt1.06□□□□□ -2.24
GAT1P43574 snR69snR69 101 nt1.06□□□□□ -2.24
GAT1P43574 tF(GAA)BtF(GAA)B 73 nt1.06□□□□□ -2.24
GAT1P43574 tF(GAA)FtF(GAA)F 73 nt1.06□□□□□ -2.24
GAT1P43574 tF(GAA)GtF(GAA)G 73 nt1.06□□□□□ -2.24
GAT1P43574 tF(GAA)H1tF(GAA)H1 73 nt1.06□□□□□ -2.24
GAT1P43574 tF(GAA)H2tF(GAA)H2 73 nt1.06□□□□□ -2.24
GAT1P43574 tF(GAA)MtF(GAA)M 73 nt1.06□□□□□ -2.24
GAT1P43574 tF(GAA)P1tF(GAA)P1 73 nt1.06□□□□□ -2.24
GAT1P43574 tF(GAA)P2tF(GAA)P2 73 nt1.06□□□□□ -2.24
GAT1P43574 CSE1YGL238W 2883 nt1.04□□□□□ -2.24
GAT1P43574 YDL159C-BYDL159C-B 177 nt1.04□□□□□ -2.24
GAT1P43574 YKL225WYKL225W 348 nt1.04□□□□□ -2.24
GAT1P43574 snR50snR50 90 nt1.04□□□□□ -2.24
GAT1P43574 YPR117WYPR117W 7470 nt1.02□□□□□ -2.25
GAT1P43574 YBR109W-AYBR109W-A 225 nt1.01□□□□□ -2.25
GAT1P43574 SPT7YBR081C 3999 nt1□□□□□ -2.25
GAT1P43574 RDS3YPR094W 324 nt1□□□□□ -2.25
GAT1P43574 YML054C-AYML054C-A 159 nt0.99□□□□□ -2.25
GAT1P43574 YNL284C-BYNL284C-B 5268 nt0.99□□□□□ -2.25
GAT1P43574 EMT1tM(CAU)D 73 nt0.97□□□□□ -2.25
GAT1P43574 EMT5tM(CAU)J1 73 nt0.97□□□□□ -2.25
GAT1P43574 EMT3tM(CAU)J2 73 nt0.97□□□□□ -2.25
GAT1P43574 EMT4tM(CAU)M 73 nt0.97□□□□□ -2.25
GAT1P43574 EMT2tM(CAU)O2 73 nt0.97□□□□□ -2.25
GAT1P43574 snR38snR38 95 nt0.97□□□□□ -2.25
GAT1P43574 SCC2YDR180W 4482 nt0.97□□□□□ -2.25
GAT1P43574 NIP1YMR309C 2439 nt0.96□□□□□ -2.26
GAT1P43574 BUD3YCL014W 4911 nt0.96□□□□□ -2.26
GAT1P43574 YHR180C-BYHR180C-B 105 nt0.96□□□□□ -2.26
GAT1P43574 YLL006W-AYLL006W-A 177 nt0.96□□□□□ -2.26
GAT1P43574 YNL054W-BYNL054W-B 5250 nt0.95□□□□□ -2.26
GAT1P43574 RPL41AYDL184C 78 nt0.94□□□□□ -2.26
GAT1P43574 YDL159W-AYDL159W-A 132 nt0.93□□□□□ -2.26
GAT1P43574 AI1Q0050 2505 nt0.93□□□□□ -2.26
GAT1P43574 BUL2YML111W 2763 nt0.93□□□□□ -2.26
GAT1P43574 YOL014WYOL014W 375 nt0.92□□□□□ -2.26
GAT1P43574 YLR149C-AYLR149C-A 87 nt0.91□□□□□ -2.26
GAT1P43574 YBR296C-AYBR296C-A 120 nt0.91□□□□□ -2.26
GAT1P43574 YJL077W-AYJL077W-A 87 nt0.9□□□□□ -2.27
GAT1P43574 RKR1YMR247C 4689 nt0.89□□□□□ -2.27
GAT1P43574 tQ(UUG)QtQ(UUG)Q 76 nt0.87□□□□□ -2.27
GAT1P43574 LTE1YAL024C 4308 nt0.86□□□□□ -2.27
GAT1P43574 SKI7YOR076C 2244 nt0.85□□□□□ -2.27
GAT1P43574 YOR192C-BYOR192C-B 5313 nt0.85□□□□□ -2.27
GAT1P43574 YJR029WYJR029W 5268 nt0.85□□□□□ -2.27
GAT1P43574 YPR137C-BYPR137C-B 5268 nt0.85□□□□□ -2.27
GAT1P43574 YKL096C-BYKL096C-B 150 nt0.84□□□□□ -2.27
GAT1P43574 UTP20YBL004W 7482 nt0.83□□□□□ -2.28
GAT1P43574 YGR122C-AYGR122C-A 129 nt0.82□□□□□ -2.28
GAT1P43574 YER090C-AYER090C-A 90 nt0.81□□□□□ -2.28
GAT1P43574 YKL145W-AYKL145W-A 93 nt0.8□□□□□ -2.28
GAT1P43574 YER078W-AYER078W-A 165 nt0.77□□□□□ -2.29
GAT1P43574 YMR160WYMR160W 2451 nt0.76□□□□□ -2.29
GAT1P43574 snR75snR75 89 nt0.74□□□□□ -2.29
GAT1P43574 tT(AGU)BtT(AGU)B 73 nt0.72□□□□□ -2.29
GAT1P43574 tT(AGU)CtT(AGU)C 73 nt0.72□□□□□ -2.29
GAT1P43574 tT(AGU)DtT(AGU)D 73 nt0.72□□□□□ -2.29
GAT1P43574 tT(AGU)HtT(AGU)H 73 nt0.72□□□□□ -2.29
GAT1P43574 tT(AGU)I1tT(AGU)I1 73 nt0.72□□□□□ -2.29
GAT1P43574 tT(AGU)I2tT(AGU)I2 73 nt0.72□□□□□ -2.29
GAT1P43574 tT(AGU)JtT(AGU)J 73 nt0.72□□□□□ -2.29
GAT1P43574 tT(AGU)N1tT(AGU)N1 73 nt0.72□□□□□ -2.29
GAT1P43574 tT(AGU)N2tT(AGU)N2 73 nt0.72□□□□□ -2.29
GAT1P43574 tT(AGU)O1tT(AGU)O1 73 nt0.72□□□□□ -2.29
GAT1P43574 tT(AGU)O2tT(AGU)O2 73 nt0.72□□□□□ -2.29
GAT1P43574 MLP1YKR095W 5628 nt0.7□□□□□ -2.3
GAT1P43574 PET111YMR257C 2403 nt0.7□□□□□ -2.3
GAT1P43574 snR67snR67 82 nt0.68□□□□□ -2.3
GAT1P43574 YBL100W-BYBL100W-B 5313 nt0.65□□□□□ -2.3
GAT1P43574 YMR272W-AYMR272W-A 114 nt0.64□□□□□ -2.31
GAT1P43574 YPR159C-AYPR159C-A 102 nt0.64□□□□□ -2.31
GAT1P43574 IQG1YPL242C 4488 nt0.59□□□□□ -2.32
GAT1P43574 MLP2YIL149C 5040 nt0.57□□□□□ -2.32
GAT1P43574 YKL106C-AYKL106C-A 120 nt0.55□□□□□ -2.32
GAT1P43574 YDL114W-AYDL114W-A 114 nt0.52□□□□□ -2.33
GAT1P43574 FMP27YLR454W 7887 nt0.52□□□□□ -2.33
GAT1P43574 UTP10YJL109C 5310 nt0.5□□□□□ -2.33
GAT1P43574 tV(UAC)QtV(UAC)Q 76 nt0.5□□□□□ -2.33
GAT1P43574 YOR186C-AYOR186C-A 210 nt0.49□□□□□ -2.33
GAT1P43574 YML100W-AYML100W-A 174 nt0.48□□□□□ -2.33
GAT1P43574 THO2YNL139C 4794 nt0.48□□□□□ -2.33
GAT1P43574 YOR376W-AYOR376W-A 156 nt0.43□□□□□ -2.34
GAT1P43574 SOV1YMR066W 2697 nt0.41□□□□□ -2.34
GAT1P43574 YOR316C-AYOR316C-A 210 nt0.34□□□□□ -2.36
GAT1P43574 ESP1YGR098C 4893 nt0.33□□□□□ -2.36
GAT1P43574 snR77snR77 88 nt0.32□□□□□ -2.36
GAT1P43574 SBH2YER019C-A 267 nt0.28□□□□□ -2.36
GAT1P43574 snR128snR128 126 nt0.27□□□□□ -2.37
GAT1P43574 YOL013W-AYOL013W-A 192 nt0.26□□□□□ -2.37
GAT1P43574 PAU9YBL108C-A 129 nt0.26□□□□□ -2.37
Retrieved 100 of 7,029 protein–RNA pairs in 15.7 ms