Protein–RNA interactions for Protein: P40048

PTP3, Tyrosine-protein phosphatase 3, yeastyeast

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PTP3P40048 YER090C-AYER090C-A 90 nt2.33□□□□□ -2.04
PTP3P40048 YLL006W-AYLL006W-A 177 nt2.33□□□□□ -2.04
PTP3P40048 TOR2YKL203C 7425 nt2.33□□□□□ -2.04
PTP3P40048 PAU24YBR301W 363 nt2.32□□□□□ -2.04
PTP3P40048 SPT7YBR081C 3999 nt2.31□□□□□ -2.04
PTP3P40048 CDC39YCR093W 6327 nt2.3□□□□□ -2.04
PTP3P40048 SPC110YDR356W 2835 nt2.3□□□□□ -2.04
PTP3P40048 YOR376W-AYOR376W-A 156 nt2.26□□□□□ -2.05
PTP3P40048 MON2YNL297C 4911 nt2.23□□□□□ -2.05
PTP3P40048 LAA1YJL207C 6045 nt2.23□□□□□ -2.05
PTP3P40048 YGR130CYGR130C 2451 nt2.23□□□□□ -2.05
PTP3P40048 DNF3YMR162C 4971 nt2.21□□□□□ -2.06
PTP3P40048 YHR214C-BYHR214C-B 5382 nt2.19□□□□□ -2.06
PTP3P40048 YNL054W-BYNL054W-B 5250 nt2.19□□□□□ -2.06
PTP3P40048 YNL284C-BYNL284C-B 5268 nt2.18□□□□□ -2.06
PTP3P40048 YDL114W-AYDL114W-A 114 nt2.17□□□□□ -2.06
PTP3P40048 USO1YDL058W 5373 nt2.16□□□□□ -2.06
PTP3P40048 LTE1YAL024C 4308 nt2.15□□□□□ -2.07
PTP3P40048 tV(UAC)QtV(UAC)Q 76 nt2.13□□□□□ -2.07
PTP3P40048 PMD1YER132C 5262 nt2.1□□□□□ -2.07
PTP3P40048 snR67snR67 82 nt2.09□□□□□ -2.07
PTP3P40048 BPH1YCR032W 6504 nt2.07□□□□□ -2.08
PTP3P40048 IML1YJR138W 4755 nt2.07□□□□□ -2.08
PTP3P40048 YOR093CYOR093C 4947 nt2.06□□□□□ -2.08
PTP3P40048 MEC1YBR136W 7107 nt2.06□□□□□ -2.08
PTP3P40048 YMR045CYMR045C 5268 nt2.04□□□□□ -2.08
PTP3P40048 YKL106C-AYKL106C-A 120 nt1.99□□□□□ -2.09
PTP3P40048 YPR117WYPR117W 7470 nt1.98□□□□□ -2.09
PTP3P40048 tT(UGU)HtT(UGU)H 72 nt1.94□□□□□ -2.1
PTP3P40048 VPS15YBR097W 4365 nt1.94□□□□□ -2.1
PTP3P40048 IQG1YPL242C 4488 nt1.93□□□□□ -2.1
PTP3P40048 VAM6YDL077C 3150 nt1.93□□□□□ -2.1
PTP3P40048 snR40snR40 97 nt1.93□□□□□ -2.1
PTP3P40048 YMR160WYMR160W 2451 nt1.92□□□□□ -2.1
PTP3P40048 BUD3YCL014W 4911 nt1.92□□□□□ -2.1
PTP3P40048 YMR247W-AYMR247W-A 144 nt1.9□□□□□ -2.11
PTP3P40048 YPR137C-BYPR137C-B 5268 nt1.89□□□□□ -2.11
PTP3P40048 YJR029WYJR029W 5268 nt1.84□□□□□ -2.11
PTP3P40048 SCC2YDR180W 4482 nt1.82□□□□□ -2.12
PTP3P40048 FIG2YCR089W 4830 nt1.81□□□□□ -2.12
PTP3P40048 tH(GUG)E1tH(GUG)E1 72 nt1.81□□□□□ -2.12
PTP3P40048 tH(GUG)E2tH(GUG)E2 72 nt1.81□□□□□ -2.12
PTP3P40048 tH(GUG)G1tH(GUG)G1 72 nt1.81□□□□□ -2.12
PTP3P40048 tH(GUG)G2tH(GUG)G2 72 nt1.81□□□□□ -2.12
PTP3P40048 tH(GUG)HtH(GUG)H 72 nt1.81□□□□□ -2.12
PTP3P40048 tH(GUG)KtH(GUG)K 72 nt1.81□□□□□ -2.12
PTP3P40048 tH(GUG)MtH(GUG)M 72 nt1.81□□□□□ -2.12
PTP3P40048 tF(GAA)BtF(GAA)B 73 nt1.77□□□□□ -2.13
PTP3P40048 tF(GAA)FtF(GAA)F 73 nt1.77□□□□□ -2.13
PTP3P40048 tF(GAA)GtF(GAA)G 73 nt1.77□□□□□ -2.13
PTP3P40048 tF(GAA)H1tF(GAA)H1 73 nt1.77□□□□□ -2.13
PTP3P40048 tF(GAA)H2tF(GAA)H2 73 nt1.77□□□□□ -2.13
PTP3P40048 tF(GAA)MtF(GAA)M 73 nt1.77□□□□□ -2.13
PTP3P40048 tF(GAA)P1tF(GAA)P1 73 nt1.77□□□□□ -2.13
PTP3P40048 tF(GAA)P2tF(GAA)P2 73 nt1.77□□□□□ -2.13
PTP3P40048 HKR1YDR420W 5409 nt1.77□□□□□ -2.13
PTP3P40048 UTP20YBL004W 7482 nt1.76□□□□□ -2.13
PTP3P40048 IRA1YBR140C 9279 nt1.74□□□□□ -2.13
PTP3P40048 BEM2YER155C 6504 nt1.7□□□□□ -2.14
PTP3P40048 YOR192C-BYOR192C-B 5313 nt1.69□□□□□ -2.14
PTP3P40048 tV(UAC)BtV(UAC)B 74 nt1.69□□□□□ -2.14
PTP3P40048 tV(UAC)DtV(UAC)D 74 nt1.69□□□□□ -2.14
PTP3P40048 MLP1YKR095W 5628 nt1.69□□□□□ -2.14
PTP3P40048 YBL100W-BYBL100W-B 5313 nt1.62□□□□□ -2.15
PTP3P40048 DOP1YDR141C 5097 nt1.61□□□□□ -2.15
PTP3P40048 RKR1YMR247C 4689 nt1.59□□□□□ -2.15
PTP3P40048 YOR316C-AYOR316C-A 210 nt1.58□□□□□ -2.16
PTP3P40048 snR77snR77 88 nt1.54□□□□□ -2.16
PTP3P40048 tQ(UUG)E2tQ(UUG)E2 72 nt1.52□□□□□ -2.17
PTP3P40048 YOL014WYOL014W 375 nt1.52□□□□□ -2.17
PTP3P40048 YML100W-AYML100W-A 174 nt1.42□□□□□ -2.18
PTP3P40048 SBH2YER019C-A 267 nt1.41□□□□□ -2.18
PTP3P40048 YJL113WYJL113W 4647 nt1.36□□□□□ -2.19
PTP3P40048 ESP1YGR098C 4893 nt1.29□□□□□ -2.2
PTP3P40048 YOR186C-AYOR186C-A 210 nt1.29□□□□□ -2.2
PTP3P40048 SOV1YMR066W 2697 nt1.29□□□□□ -2.2
PTP3P40048 YKL145W-AYKL145W-A 93 nt1.22□□□□□ -2.21
PTP3P40048 EMT1tM(CAU)D 73 nt1.19□□□□□ -2.22
PTP3P40048 EMT5tM(CAU)J1 73 nt1.19□□□□□ -2.22
PTP3P40048 EMT3tM(CAU)J2 73 nt1.19□□□□□ -2.22
PTP3P40048 EMT4tM(CAU)M 73 nt1.19□□□□□ -2.22
PTP3P40048 EMT2tM(CAU)O2 73 nt1.19□□□□□ -2.22
PTP3P40048 THO2YNL139C 4794 nt1.17□□□□□ -2.22
PTP3P40048 MYO1YHR023W 5787 nt1.15□□□□□ -2.23
PTP3P40048 FMP27YLR454W 7887 nt1.1□□□□□ -2.23
PTP3P40048 tT(AGU)BtT(AGU)B 73 nt1.06□□□□□ -2.24
PTP3P40048 tT(AGU)CtT(AGU)C 73 nt1.06□□□□□ -2.24
PTP3P40048 tT(AGU)DtT(AGU)D 73 nt1.06□□□□□ -2.24
PTP3P40048 tT(AGU)HtT(AGU)H 73 nt1.06□□□□□ -2.24
PTP3P40048 tT(AGU)I1tT(AGU)I1 73 nt1.06□□□□□ -2.24
PTP3P40048 tT(AGU)I2tT(AGU)I2 73 nt1.06□□□□□ -2.24
PTP3P40048 tT(AGU)JtT(AGU)J 73 nt1.06□□□□□ -2.24
PTP3P40048 tT(AGU)N1tT(AGU)N1 73 nt1.06□□□□□ -2.24
PTP3P40048 tT(AGU)N2tT(AGU)N2 73 nt1.06□□□□□ -2.24
PTP3P40048 tT(AGU)O1tT(AGU)O1 73 nt1.06□□□□□ -2.24
PTP3P40048 tT(AGU)O2tT(AGU)O2 73 nt1.06□□□□□ -2.24
PTP3P40048 YPR159C-AYPR159C-A 102 nt1.03□□□□□ -2.24
PTP3P40048 YMR272W-AYMR272W-A 114 nt0.87□□□□□ -2.27
PTP3P40048 PAU9YBL108C-A 129 nt0.81□□□□□ -2.28
PTP3P40048 snR128snR128 126 nt0.75□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 34.4 ms