Protein–RNA interactions for Protein: P40028

YEN1, Holliday junction resolvase YEN1, yeastyeast

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YEN1P40028 YDR371C-AYDR371C-A 105 nt0.63□□□□□ -2.31
YEN1P40028 UTP20YBL004W 7482 nt0.63□□□□□ -2.31
YEN1P40028 SBH1YER087C-B 249 nt0.62□□□□□ -2.31
YEN1P40028 YGR146C-AYGR146C-A 162 nt0.62□□□□□ -2.31
YEN1P40028 YMR272W-AYMR272W-A 114 nt0.62□□□□□ -2.31
YEN1P40028 ORC3YLL004W 1851 nt0.61□□□□□ -2.31
YEN1P40028 RCO1YMR075W 2055 nt0.6□□□□□ -2.31
YEN1P40028 SOM1YEL059C-A 225 nt0.6□□□□□ -2.31
YEN1P40028 YCR095W-AYCR095W-A 159 nt0.57□□□□□ -2.32
YEN1P40028 UTP10YJL109C 5310 nt0.56□□□□□ -2.32
YEN1P40028 BIR1YJR089W 2865 nt0.55□□□□□ -2.32
YEN1P40028 YMR160WYMR160W 2451 nt0.53□□□□□ -2.32
YEN1P40028 YNL205CYNL205C 423 nt0.53□□□□□ -2.32
YEN1P40028 YOR186C-AYOR186C-A 210 nt0.53□□□□□ -2.32
YEN1P40028 YBR099CYBR099C 384 nt0.53□□□□□ -2.32
YEN1P40028 YBL100W-BYBL100W-B 5313 nt0.53□□□□□ -2.33
YEN1P40028 CSE1YGL238W 2883 nt0.51□□□□□ -2.33
YEN1P40028 EST1YLR233C 2100 nt0.49□□□□□ -2.33
YEN1P40028 Q0143Q0143 153 nt0.49□□□□□ -2.33
YEN1P40028 PMP2YEL017C-A 132 nt0.47□□□□□ -2.33
YEN1P40028 YNL266WYNL266W 420 nt0.47□□□□□ -2.33
YEN1P40028 FMP27YLR454W 7887 nt0.45□□□□□ -2.34
YEN1P40028 snR69snR69 101 nt0.45□□□□□ -2.34
YEN1P40028 tF(GAA)BtF(GAA)B 73 nt0.45□□□□□ -2.34
YEN1P40028 tF(GAA)FtF(GAA)F 73 nt0.45□□□□□ -2.34
YEN1P40028 tF(GAA)GtF(GAA)G 73 nt0.45□□□□□ -2.34
YEN1P40028 tF(GAA)H1tF(GAA)H1 73 nt0.45□□□□□ -2.34
YEN1P40028 tF(GAA)H2tF(GAA)H2 73 nt0.45□□□□□ -2.34
YEN1P40028 tF(GAA)MtF(GAA)M 73 nt0.45□□□□□ -2.34
YEN1P40028 tF(GAA)P1tF(GAA)P1 73 nt0.45□□□□□ -2.34
YEN1P40028 tF(GAA)P2tF(GAA)P2 73 nt0.45□□□□□ -2.34
YEN1P40028 YBR178WYBR178W 375 nt0.45□□□□□ -2.34
YEN1P40028 SEC10YLR166C 2616 nt0.45□□□□□ -2.34
YEN1P40028 ESP1YGR098C 4893 nt0.44□□□□□ -2.34
YEN1P40028 YNL103W-AYNL103W-A 90 nt0.43□□□□□ -2.34
YEN1P40028 YKL145W-AYKL145W-A 93 nt0.41□□□□□ -2.34
YEN1P40028 tD(GUC)QtD(GUC)Q 75 nt0.38□□□□□ -2.35
YEN1P40028 snR85snR85 171 nt0.36□□□□□ -2.35
YEN1P40028 YOL013W-AYOL013W-A 192 nt0.36□□□□□ -2.35
YEN1P40028 YJL077W-AYJL077W-A 87 nt0.34□□□□□ -2.36
YEN1P40028 YBR196C-AYBR196C-A 150 nt0.34□□□□□ -2.36
YEN1P40028 SOV1YMR066W 2697 nt0.33□□□□□ -2.36
YEN1P40028 RDS3YPR094W 324 nt0.33□□□□□ -2.36
YEN1P40028 YLR286W-AYLR286W-A 135 nt0.32□□□□□ -2.36
YEN1P40028 YOL014WYOL014W 375 nt0.32□□□□□ -2.36
YEN1P40028 snR61snR61 90 nt0.3□□□□□ -2.36
YEN1P40028 snR81snR81 201 nt0.3□□□□□ -2.36
YEN1P40028 tQ(UUG)QtQ(UUG)Q 76 nt0.29□□□□□ -2.36
YEN1P40028 TFB5YDR079C-A 219 nt0.28□□□□□ -2.36
YEN1P40028 YDL159C-BYDL159C-B 177 nt0.27□□□□□ -2.37
YEN1P40028 AI1Q0050 2505 nt0.26□□□□□ -2.37
YEN1P40028 YBL071C-BYBL071C-B 99 nt0.26□□□□□ -2.37
YEN1P40028 YGL041C-BYGL041C-B 183 nt0.25□□□□□ -2.37
YEN1P40028 snR50snR50 90 nt0.25□□□□□ -2.37
YEN1P40028 THO2YNL139C 4794 nt0.25□□□□□ -2.37
YEN1P40028 YOL083C-AYOL083C-A 141 nt0.24□□□□□ -2.37
YEN1P40028 YER090C-AYER090C-A 90 nt0.23□□□□□ -2.37
YEN1P40028 YAL037C-AYAL037C-A 93 nt0.22□□□□□ -2.37
YEN1P40028 YLR299C-AYLR299C-A 93 nt0.22□□□□□ -2.37
YEN1P40028 YBL109WYBL109W 336 nt0.2□□□□□ -2.38
YEN1P40028 YOL164W-AYOL164W-A 183 nt0.13□□□□□ -2.39
YEN1P40028 YMR326CYMR326C 309 nt0.12□□□□□ -2.39
YEN1P40028 YML054C-AYML054C-A 159 nt0.11□□□□□ -2.39
YEN1P40028 YML100W-AYML100W-A 174 nt0.11□□□□□ -2.39
YEN1P40028 YHR217CYHR217C 462 nt0.09□□□□□ -2.4
YEN1P40028 tS(GCU)Q1tS(GCU)Q1 86 nt0.08□□□□□ -2.4
YEN1P40028 snR128snR128 126 nt0.08□□□□□ -2.4
YEN1P40028 YER078W-AYER078W-A 165 nt0.07□□□□□ -2.4
YEN1P40028 YDR524C-AYDR524C-A 120 nt0.06□□□□□ -2.4
YEN1P40028 YGR240C-AYGR240C-A 201 nt0.02□□□□□ -2.41
YEN1P40028 snR67snR67 82 nt0.01□□□□□ -2.41
YEN1P40028 YHR180C-BYHR180C-B 105 nt0.01□□□□□ -2.41
YEN1P40028 snR47snR47 99 nt0.01□□□□□ -2.41
YEN1P40028 YBR109W-AYBR109W-A 225 nt0□□□□□ -2.41
YEN1P40028 SKI7YOR076C 2244 nt-0.02□□□□□ -2.41
YEN1P40028 snR62snR62 100 nt-0.04□□□□□ -2.42
YEN1P40028 snR38snR38 95 nt-0.04□□□□□ -2.42
YEN1P40028 snR45snR45 172 nt-0.04□□□□□ -2.42
YEN1P40028 YBL100W-CYBL100W-C 120 nt-0.07□□□□□ -2.42
YEN1P40028 YDR034C-AYDR034C-A 177 nt-0.09□□□□□ -2.42
YEN1P40028 RPL41AYDL184C 78 nt-0.12□□□□□ -2.43
YEN1P40028 YBR296C-AYBR296C-A 120 nt-0.12□□□□□ -2.43
YEN1P40028 PAU9YBL108C-A 129 nt-0.16□□□□□ -2.44
YEN1P40028 tA(UGC)QtA(UGC)Q 76 nt-0.17□□□□□ -2.44
YEN1P40028 YLL066W-BYLL066W-B 171 nt-0.17□□□□□ -2.44
YEN1P40028 SBH2YER019C-A 267 nt-0.2□□□□□ -2.44
YEN1P40028 YKL225WYKL225W 348 nt-0.2□□□□□ -2.44
YEN1P40028 YJL113WYJL113W 4647 nt-0.24□□□□□ -2.45
YEN1P40028 YDL247W-AYDL247W-A 75 nt-0.24□□□□□ -2.45
YEN1P40028 YOR376W-AYOR376W-A 156 nt-0.31□□□□□ -2.46
YEN1P40028 URB1YKL014C 5295 nt-0.34□□□□□ -2.46
YEN1P40028 snR64snR64 101 nt-0.36□□□□□ -2.47
YEN1P40028 YKL106C-AYKL106C-A 120 nt-0.36□□□□□ -2.47
YEN1P40028 YDL159W-AYDL159W-A 132 nt-0.4□□□□□ -2.47
YEN1P40028 YHL009W-BYHL009W-B 5409 nt-0.43□□□□□ -2.48
YEN1P40028 snR161snR161 161 nt-0.46□□□□□ -2.48
YEN1P40028 YOR316C-AYOR316C-A 210 nt-0.49□□□□□ -2.49
YEN1P40028 tT(UGU)G1tT(UGU)G1 72 nt-0.54□□□□□ -2.5
YEN1P40028 tT(UGU)G2tT(UGU)G2 72 nt-0.54□□□□□ -2.5
YEN1P40028 tT(UGU)PtT(UGU)P 72 nt-0.54□□□□□ -2.5
Retrieved 100 of 7,029 protein–RNA pairs in 11.5 ms