Protein–RNA interactions for Protein: P38878

LNP1, Endoplasmic reticulum junction formation protein lunapark, yeastyeast

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LNP1P38878 YBL100W-BYBL100W-B 5313 nt0.67□□□□□ -2.3
LNP1P38878 YMR160WYMR160W 2451 nt0.65□□□□□ -2.3
LNP1P38878 RCO1YMR075W 2055 nt0.65□□□□□ -2.31
LNP1P38878 YMR272W-AYMR272W-A 114 nt0.65□□□□□ -2.31
LNP1P38878 YNL054W-BYNL054W-B 5250 nt0.65□□□□□ -2.31
LNP1P38878 Q0143Q0143 153 nt0.64□□□□□ -2.31
LNP1P38878 ORC3YLL004W 1851 nt0.63□□□□□ -2.31
LNP1P38878 YBR099CYBR099C 384 nt0.63□□□□□ -2.31
LNP1P38878 ESP1YGR098C 4893 nt0.62□□□□□ -2.31
LNP1P38878 MYO1YHR023W 5787 nt0.61□□□□□ -2.31
LNP1P38878 tT(AGU)BtT(AGU)B 73 nt0.6□□□□□ -2.31
LNP1P38878 tT(AGU)CtT(AGU)C 73 nt0.6□□□□□ -2.31
LNP1P38878 tT(AGU)DtT(AGU)D 73 nt0.6□□□□□ -2.31
LNP1P38878 tT(AGU)HtT(AGU)H 73 nt0.6□□□□□ -2.31
LNP1P38878 tT(AGU)I1tT(AGU)I1 73 nt0.6□□□□□ -2.31
LNP1P38878 tT(AGU)I2tT(AGU)I2 73 nt0.6□□□□□ -2.31
LNP1P38878 tT(AGU)JtT(AGU)J 73 nt0.6□□□□□ -2.31
LNP1P38878 tT(AGU)N1tT(AGU)N1 73 nt0.6□□□□□ -2.31
LNP1P38878 tT(AGU)N2tT(AGU)N2 73 nt0.6□□□□□ -2.31
LNP1P38878 tT(AGU)O1tT(AGU)O1 73 nt0.6□□□□□ -2.31
LNP1P38878 tT(AGU)O2tT(AGU)O2 73 nt0.6□□□□□ -2.31
LNP1P38878 YOL014WYOL014W 375 nt0.6□□□□□ -2.31
LNP1P38878 MLP1YKR095W 5628 nt0.6□□□□□ -2.31
LNP1P38878 CSE1YGL238W 2883 nt0.58□□□□□ -2.32
LNP1P38878 PMP2YEL017C-A 132 nt0.58□□□□□ -2.32
LNP1P38878 SBH1YER087C-B 249 nt0.57□□□□□ -2.32
LNP1P38878 YKL145W-AYKL145W-A 93 nt0.56□□□□□ -2.32
LNP1P38878 YNL266WYNL266W 420 nt0.56□□□□□ -2.32
LNP1P38878 EST1YLR233C 2100 nt0.55□□□□□ -2.32
LNP1P38878 SEC10YLR166C 2616 nt0.54□□□□□ -2.32
LNP1P38878 snR69snR69 101 nt0.53□□□□□ -2.32
LNP1P38878 UTP10YJL109C 5310 nt0.52□□□□□ -2.33
LNP1P38878 YBR178WYBR178W 375 nt0.49□□□□□ -2.33
LNP1P38878 YJL077W-AYJL077W-A 87 nt0.47□□□□□ -2.33
LNP1P38878 MLP2YIL149C 5040 nt0.46□□□□□ -2.34
LNP1P38878 FMP27YLR454W 7887 nt0.45□□□□□ -2.34
LNP1P38878 snR85snR85 171 nt0.45□□□□□ -2.34
LNP1P38878 tD(GUC)QtD(GUC)Q 75 nt0.45□□□□□ -2.34
LNP1P38878 YNL103W-AYNL103W-A 90 nt0.45□□□□□ -2.34
LNP1P38878 AI1Q0050 2505 nt0.43□□□□□ -2.34
LNP1P38878 RDS3YPR094W 324 nt0.42□□□□□ -2.34
LNP1P38878 YBR196C-AYBR196C-A 150 nt0.41□□□□□ -2.34
LNP1P38878 SOV1YMR066W 2697 nt0.41□□□□□ -2.34
LNP1P38878 snR61snR61 90 nt0.4□□□□□ -2.35
LNP1P38878 YOR186C-AYOR186C-A 210 nt0.39□□□□□ -2.35
LNP1P38878 YLR286W-AYLR286W-A 135 nt0.36□□□□□ -2.35
LNP1P38878 snR81snR81 201 nt0.32□□□□□ -2.36
LNP1P38878 TFB5YDR079C-A 219 nt0.32□□□□□ -2.36
LNP1P38878 YAL037C-AYAL037C-A 93 nt0.32□□□□□ -2.36
LNP1P38878 YDL159C-BYDL159C-B 177 nt0.31□□□□□ -2.36
LNP1P38878 YER090C-AYER090C-A 90 nt0.31□□□□□ -2.36
LNP1P38878 tQ(UUG)QtQ(UUG)Q 76 nt0.3□□□□□ -2.36
LNP1P38878 YOL013W-AYOL013W-A 192 nt0.3□□□□□ -2.36
LNP1P38878 THO2YNL139C 4794 nt0.29□□□□□ -2.36
LNP1P38878 YER078W-AYER078W-A 165 nt0.28□□□□□ -2.36
LNP1P38878 YBL071C-BYBL071C-B 99 nt0.28□□□□□ -2.36
LNP1P38878 YGL041C-BYGL041C-B 183 nt0.27□□□□□ -2.37
LNP1P38878 YLR299C-AYLR299C-A 93 nt0.27□□□□□ -2.37
LNP1P38878 YOL083C-AYOL083C-A 141 nt0.23□□□□□ -2.37
LNP1P38878 snR50snR50 90 nt0.22□□□□□ -2.37
LNP1P38878 YMR326CYMR326C 309 nt0.21□□□□□ -2.38
LNP1P38878 YBL109WYBL109W 336 nt0.19□□□□□ -2.38
LNP1P38878 YHR217CYHR217C 462 nt0.18□□□□□ -2.38
LNP1P38878 YML100W-AYML100W-A 174 nt0.17□□□□□ -2.38
LNP1P38878 YOL164W-AYOL164W-A 183 nt0.15□□□□□ -2.39
LNP1P38878 tS(GCU)Q1tS(GCU)Q1 86 nt0.11□□□□□ -2.39
LNP1P38878 YDR524C-AYDR524C-A 120 nt0.1□□□□□ -2.39
LNP1P38878 YML054C-AYML054C-A 159 nt0.09□□□□□ -2.4
LNP1P38878 snR128snR128 126 nt0.08□□□□□ -2.4
LNP1P38878 snR67snR67 82 nt0.05□□□□□ -2.4
LNP1P38878 snR45snR45 172 nt0.05□□□□□ -2.4
LNP1P38878 YGR240C-AYGR240C-A 201 nt0.03□□□□□ -2.4
LNP1P38878 YHR180C-BYHR180C-B 105 nt0.02□□□□□ -2.41
LNP1P38878 snR62snR62 100 nt0.01□□□□□ -2.41
LNP1P38878 YBR109W-AYBR109W-A 225 nt-0.01□□□□□ -2.41
LNP1P38878 YBL100W-CYBL100W-C 120 nt-0.02□□□□□ -2.41
LNP1P38878 snR47snR47 99 nt-0.03□□□□□ -2.41
LNP1P38878 YJL113WYJL113W 4647 nt-0.05□□□□□ -2.42
LNP1P38878 SKI7YOR076C 2244 nt-0.06□□□□□ -2.42
LNP1P38878 snR38snR38 95 nt-0.07□□□□□ -2.42
LNP1P38878 YBR296C-AYBR296C-A 120 nt-0.1□□□□□ -2.43
LNP1P38878 RPL41AYDL184C 78 nt-0.13□□□□□ -2.43
LNP1P38878 YDR034C-AYDR034C-A 177 nt-0.13□□□□□ -2.43
LNP1P38878 YDL247W-AYDL247W-A 75 nt-0.19□□□□□ -2.44
LNP1P38878 tA(UGC)QtA(UGC)Q 76 nt-0.19□□□□□ -2.44
LNP1P38878 YLL066W-BYLL066W-B 171 nt-0.21□□□□□ -2.44
LNP1P38878 SBH2YER019C-A 267 nt-0.23□□□□□ -2.45
LNP1P38878 PAU9YBL108C-A 129 nt-0.23□□□□□ -2.45
LNP1P38878 YKL225WYKL225W 348 nt-0.24□□□□□ -2.45
LNP1P38878 YHL009W-BYHL009W-B 5409 nt-0.27□□□□□ -2.45
LNP1P38878 YOR376W-AYOR376W-A 156 nt-0.39□□□□□ -2.47
LNP1P38878 snR64snR64 101 nt-0.4□□□□□ -2.47
LNP1P38878 YKL106C-AYKL106C-A 120 nt-0.42□□□□□ -2.48
LNP1P38878 YOR316C-AYOR316C-A 210 nt-0.51□□□□□ -2.49
LNP1P38878 URB1YKL014C 5295 nt-0.51□□□□□ -2.49
LNP1P38878 snR161snR161 161 nt-0.54□□□□□ -2.5
LNP1P38878 snR53snR53 91 nt-0.55□□□□□ -2.5
LNP1P38878 YDL159W-AYDL159W-A 132 nt-0.56□□□□□ -2.5
LNP1P38878 YGR122C-AYGR122C-A 129 nt-0.67□□□□□ -2.52
LNP1P38878 tV(UAC)QtV(UAC)Q 76 nt-0.7□□□□□ -2.52
Retrieved 100 of 7,029 protein–RNA pairs in 10 ms