Protein–RNA interactions for Protein: P38823

DMA1, E3 ubiquitin-protein ligase DMA1, yeastyeast

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DMA1P38823 PET127YOR017W 2403 nt1.54□□□□□ -2.16
DMA1P38823 YOL164W-AYOL164W-A 183 nt1.49□□□□□ -2.17
DMA1P38823 PET111YMR257C 2403 nt1.49□□□□□ -2.17
DMA1P38823 YLR299C-AYLR299C-A 93 nt1.48□□□□□ -2.17
DMA1P38823 BUD3YCL014W 4911 nt1.48□□□□□ -2.17
DMA1P38823 IML1YJR138W 4755 nt1.47□□□□□ -2.17
DMA1P38823 snR45snR45 172 nt1.47□□□□□ -2.17
DMA1P38823 YDL159C-BYDL159C-B 177 nt1.46□□□□□ -2.18
DMA1P38823 YNL284C-BYNL284C-B 5268 nt1.45□□□□□ -2.18
DMA1P38823 RKR1YMR247C 4689 nt1.43□□□□□ -2.18
DMA1P38823 YGR240C-AYGR240C-A 201 nt1.42□□□□□ -2.18
DMA1P38823 YPR137C-BYPR137C-B 5268 nt1.4□□□□□ -2.18
DMA1P38823 YDR371C-AYDR371C-A 105 nt1.38□□□□□ -2.19
DMA1P38823 PAU12YGR294W 363 nt1.37□□□□□ -2.19
DMA1P38823 EMT1tM(CAU)D 73 nt1.34□□□□□ -2.19
DMA1P38823 EMT5tM(CAU)J1 73 nt1.34□□□□□ -2.19
DMA1P38823 EMT3tM(CAU)J2 73 nt1.34□□□□□ -2.19
DMA1P38823 EMT4tM(CAU)M 73 nt1.34□□□□□ -2.19
DMA1P38823 EMT2tM(CAU)O2 73 nt1.34□□□□□ -2.19
DMA1P38823 tQ(UUG)E2tQ(UUG)E2 72 nt1.33□□□□□ -2.2
DMA1P38823 PAU24YBR301W 363 nt1.32□□□□□ -2.2
DMA1P38823 YDR034C-AYDR034C-A 177 nt1.3□□□□□ -2.2
DMA1P38823 YOR192C-BYOR192C-B 5313 nt1.29□□□□□ -2.2
DMA1P38823 tQ(UUG)QtQ(UUG)Q 76 nt1.29□□□□□ -2.2
DMA1P38823 UTP20YBL004W 7482 nt1.28□□□□□ -2.21
DMA1P38823 tH(GUG)E1tH(GUG)E1 72 nt1.22□□□□□ -2.21
DMA1P38823 tH(GUG)E2tH(GUG)E2 72 nt1.22□□□□□ -2.21
DMA1P38823 tH(GUG)G1tH(GUG)G1 72 nt1.22□□□□□ -2.21
DMA1P38823 tH(GUG)G2tH(GUG)G2 72 nt1.22□□□□□ -2.21
DMA1P38823 tH(GUG)HtH(GUG)H 72 nt1.22□□□□□ -2.21
DMA1P38823 tH(GUG)KtH(GUG)K 72 nt1.22□□□□□ -2.21
DMA1P38823 tH(GUG)MtH(GUG)M 72 nt1.22□□□□□ -2.21
DMA1P38823 YBL100W-BYBL100W-B 5313 nt1.22□□□□□ -2.21
DMA1P38823 VAM6YDL077C 3150 nt1.2□□□□□ -2.22
DMA1P38823 snR47snR47 99 nt1.2□□□□□ -2.22
DMA1P38823 YER090C-AYER090C-A 90 nt1.19□□□□□ -2.22
DMA1P38823 tV(UAC)BtV(UAC)B 74 nt1.16□□□□□ -2.22
DMA1P38823 tV(UAC)DtV(UAC)D 74 nt1.16□□□□□ -2.22
DMA1P38823 YPR159C-AYPR159C-A 102 nt1.16□□□□□ -2.22
DMA1P38823 YOR186C-AYOR186C-A 210 nt1.15□□□□□ -2.23
DMA1P38823 YHR180C-BYHR180C-B 105 nt1.14□□□□□ -2.23
DMA1P38823 ORC3YLL004W 1851 nt1.14□□□□□ -2.23
DMA1P38823 YML054C-AYML054C-A 159 nt1.06□□□□□ -2.24
DMA1P38823 FMP27YLR454W 7887 nt1.04□□□□□ -2.24
DMA1P38823 RPL41AYDL184C 78 nt0.98□□□□□ -2.25
DMA1P38823 YBR296C-AYBR296C-A 120 nt0.98□□□□□ -2.25
DMA1P38823 AI1Q0050 2505 nt0.98□□□□□ -2.25
DMA1P38823 YMR160WYMR160W 2451 nt0.95□□□□□ -2.26
DMA1P38823 snR50snR50 90 nt0.94□□□□□ -2.26
DMA1P38823 YBR109W-AYBR109W-A 225 nt0.93□□□□□ -2.26
DMA1P38823 snR67snR67 82 nt0.9□□□□□ -2.27
DMA1P38823 ESP1YGR098C 4893 nt0.9□□□□□ -2.27
DMA1P38823 MYO1YHR023W 5787 nt0.87□□□□□ -2.27
DMA1P38823 snR64snR64 101 nt0.85□□□□□ -2.27
DMA1P38823 YKL225WYKL225W 348 nt0.85□□□□□ -2.27
DMA1P38823 snR53snR53 91 nt0.82□□□□□ -2.28
DMA1P38823 tF(GAA)BtF(GAA)B 73 nt0.77□□□□□ -2.29
DMA1P38823 tF(GAA)FtF(GAA)F 73 nt0.77□□□□□ -2.29
DMA1P38823 tF(GAA)GtF(GAA)G 73 nt0.77□□□□□ -2.29
DMA1P38823 tF(GAA)H1tF(GAA)H1 73 nt0.77□□□□□ -2.29
DMA1P38823 tF(GAA)H2tF(GAA)H2 73 nt0.77□□□□□ -2.29
DMA1P38823 tF(GAA)MtF(GAA)M 73 nt0.77□□□□□ -2.29
DMA1P38823 tF(GAA)P1tF(GAA)P1 73 nt0.77□□□□□ -2.29
DMA1P38823 tF(GAA)P2tF(GAA)P2 73 nt0.77□□□□□ -2.29
DMA1P38823 tT(AGU)BtT(AGU)B 73 nt0.75□□□□□ -2.29
DMA1P38823 tT(AGU)CtT(AGU)C 73 nt0.75□□□□□ -2.29
DMA1P38823 tT(AGU)DtT(AGU)D 73 nt0.75□□□□□ -2.29
DMA1P38823 tT(AGU)HtT(AGU)H 73 nt0.75□□□□□ -2.29
DMA1P38823 tT(AGU)I1tT(AGU)I1 73 nt0.75□□□□□ -2.29
DMA1P38823 tT(AGU)I2tT(AGU)I2 73 nt0.75□□□□□ -2.29
DMA1P38823 tT(AGU)JtT(AGU)J 73 nt0.75□□□□□ -2.29
DMA1P38823 tT(AGU)N1tT(AGU)N1 73 nt0.75□□□□□ -2.29
DMA1P38823 tT(AGU)N2tT(AGU)N2 73 nt0.75□□□□□ -2.29
DMA1P38823 tT(AGU)O1tT(AGU)O1 73 nt0.75□□□□□ -2.29
DMA1P38823 tT(AGU)O2tT(AGU)O2 73 nt0.75□□□□□ -2.29
DMA1P38823 YMR272W-AYMR272W-A 114 nt0.74□□□□□ -2.29
DMA1P38823 UTP10YJL109C 5310 nt0.73□□□□□ -2.29
DMA1P38823 snR38snR38 95 nt0.69□□□□□ -2.3
DMA1P38823 SOV1YMR066W 2697 nt0.65□□□□□ -2.31
DMA1P38823 YML100W-AYML100W-A 174 nt0.64□□□□□ -2.31
DMA1P38823 YOL014WYOL014W 375 nt0.62□□□□□ -2.31
DMA1P38823 YOL013W-AYOL013W-A 192 nt0.6□□□□□ -2.31
DMA1P38823 YKL145W-AYKL145W-A 93 nt0.59□□□□□ -2.31
DMA1P38823 THO2YNL139C 4794 nt0.56□□□□□ -2.32
DMA1P38823 SKI7YOR076C 2244 nt0.47□□□□□ -2.33
DMA1P38823 snR128snR128 126 nt0.45□□□□□ -2.34
DMA1P38823 YER078W-AYER078W-A 165 nt0.28□□□□□ -2.36
DMA1P38823 YKL106C-AYKL106C-A 120 nt0.26□□□□□ -2.37
DMA1P38823 YGR122C-AYGR122C-A 129 nt0.18□□□□□ -2.38
DMA1P38823 YDL159W-AYDL159W-A 132 nt0.14□□□□□ -2.39
DMA1P38823 YJL113WYJL113W 4647 nt0.09□□□□□ -2.39
DMA1P38823 PAU9YBL108C-A 129 nt0.08□□□□□ -2.4
DMA1P38823 YLR149C-AYLR149C-A 87 nt0.04□□□□□ -2.4
DMA1P38823 tA(UGC)QtA(UGC)Q 76 nt-0.01□□□□□ -2.41
DMA1P38823 YOR316C-AYOR316C-A 210 nt-0.05□□□□□ -2.42
DMA1P38823 YOR376W-AYOR376W-A 156 nt-0.08□□□□□ -2.42
DMA1P38823 YHL009W-BYHL009W-B 5409 nt-0.09□□□□□ -2.42
DMA1P38823 YKL096C-BYKL096C-B 150 nt-0.12□□□□□ -2.43
DMA1P38823 SBH2YER019C-A 267 nt-0.14□□□□□ -2.43
DMA1P38823 YDL114W-AYDL114W-A 114 nt-0.16□□□□□ -2.44
Retrieved 100 of 7,029 protein–RNA pairs in 8.5 ms