Protein–RNA interactions for Protein: P17255

VMA1, V-type proton ATPase catalytic subunit A, yeastyeast

Known RBP Predictions only

Length 1,071 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA1P17255 YHR214C-BYHR214C-B 5382 nt2.02□□□□□ -2.09
VMA1P17255 YMR045CYMR045C 5268 nt2.01□□□□□ -2.09
VMA1P17255 TRM732YMR259C 4263 nt2.01□□□□□ -2.09
VMA1P17255 MLP2YIL149C 5040 nt2.01□□□□□ -2.09
VMA1P17255 NUP188YML103C 4968 nt2□□□□□ -2.09
VMA1P17255 snR67snR67 82 nt2□□□□□ -2.09
VMA1P17255 YMR247W-AYMR247W-A 144 nt2□□□□□ -2.09
VMA1P17255 YMR272W-BYMR272W-B 108 nt2□□□□□ -2.09
VMA1P17255 PMD1YER132C 5262 nt1.99□□□□□ -2.09
VMA1P17255 NUP192YJL039C 5052 nt1.98□□□□□ -2.09
VMA1P17255 YKL106C-AYKL106C-A 120 nt1.97□□□□□ -2.09
VMA1P17255 SPC110YDR356W 2835 nt1.96□□□□□ -2.1
VMA1P17255 LAA1YJL207C 6045 nt1.95□□□□□ -2.1
VMA1P17255 BST1YFL025C 3090 nt1.93□□□□□ -2.1
VMA1P17255 YOR093CYOR093C 4947 nt1.92□□□□□ -2.1
VMA1P17255 tT(UGU)HtT(UGU)H 72 nt1.91□□□□□ -2.1
VMA1P17255 YNL284C-BYNL284C-B 5268 nt1.91□□□□□ -2.1
VMA1P17255 CDC39YCR093W 6327 nt1.9□□□□□ -2.11
VMA1P17255 YNL054W-BYNL054W-B 5250 nt1.89□□□□□ -2.11
VMA1P17255 YGR130CYGR130C 2451 nt1.86□□□□□ -2.11
VMA1P17255 YMR160WYMR160W 2451 nt1.86□□□□□ -2.11
VMA1P17255 CFT1YDR301W 4074 nt1.86□□□□□ -2.11
VMA1P17255 BRR2YER172C 6492 nt1.85□□□□□ -2.11
VMA1P17255 DNF3YMR162C 4971 nt1.83□□□□□ -2.12
VMA1P17255 FIG2YCR089W 4830 nt1.82□□□□□ -2.12
VMA1P17255 MEC1YBR136W 7107 nt1.79□□□□□ -2.12
VMA1P17255 SPT7YBR081C 3999 nt1.78□□□□□ -2.12
VMA1P17255 VAM6YDL077C 3150 nt1.74□□□□□ -2.13
VMA1P17255 SSK2YNR031C 4740 nt1.74□□□□□ -2.13
VMA1P17255 IRA1YBR140C 9279 nt1.73□□□□□ -2.13
VMA1P17255 YPR117WYPR117W 7470 nt1.66□□□□□ -2.14
VMA1P17255 VPS15YBR097W 4365 nt1.65□□□□□ -2.15
VMA1P17255 YOR192C-BYOR192C-B 5313 nt1.62□□□□□ -2.15
VMA1P17255 snR77snR77 88 nt1.56□□□□□ -2.16
VMA1P17255 CCH1YGR217W 6120 nt1.52□□□□□ -2.17
VMA1P17255 YOR316C-AYOR316C-A 210 nt1.51□□□□□ -2.17
VMA1P17255 HKR1YDR420W 5409 nt1.48□□□□□ -2.17
VMA1P17255 MYO1YHR023W 5787 nt1.47□□□□□ -2.17
VMA1P17255 RKR1YMR247C 4689 nt1.46□□□□□ -2.17
VMA1P17255 tH(GUG)E1tH(GUG)E1 72 nt1.45□□□□□ -2.18
VMA1P17255 tH(GUG)E2tH(GUG)E2 72 nt1.45□□□□□ -2.18
VMA1P17255 tH(GUG)G1tH(GUG)G1 72 nt1.45□□□□□ -2.18
VMA1P17255 tH(GUG)G2tH(GUG)G2 72 nt1.45□□□□□ -2.18
VMA1P17255 tH(GUG)HtH(GUG)H 72 nt1.45□□□□□ -2.18
VMA1P17255 tH(GUG)KtH(GUG)K 72 nt1.45□□□□□ -2.18
VMA1P17255 tH(GUG)MtH(GUG)M 72 nt1.45□□□□□ -2.18
VMA1P17255 LTE1YAL024C 4308 nt1.45□□□□□ -2.18
VMA1P17255 tQ(UUG)E2tQ(UUG)E2 72 nt1.43□□□□□ -2.18
VMA1P17255 SBH2YER019C-A 267 nt1.41□□□□□ -2.18
VMA1P17255 YBL100W-BYBL100W-B 5313 nt1.37□□□□□ -2.19
VMA1P17255 IML1YJR138W 4755 nt1.37□□□□□ -2.19
VMA1P17255 SCC2YDR180W 4482 nt1.36□□□□□ -2.19
VMA1P17255 PAU24YBR301W 363 nt1.35□□□□□ -2.19
VMA1P17255 BUD3YCL014W 4911 nt1.35□□□□□ -2.19
VMA1P17255 SOV1YMR066W 2697 nt1.28□□□□□ -2.2
VMA1P17255 tV(UAC)BtV(UAC)B 74 nt1.28□□□□□ -2.2
VMA1P17255 tV(UAC)DtV(UAC)D 74 nt1.28□□□□□ -2.2
VMA1P17255 YML100W-AYML100W-A 174 nt1.27□□□□□ -2.21
VMA1P17255 YJR029WYJR029W 5268 nt1.24□□□□□ -2.21
VMA1P17255 MLP1YKR095W 5628 nt1.23□□□□□ -2.21
VMA1P17255 BEM2YER155C 6504 nt1.18□□□□□ -2.22
VMA1P17255 YPR137C-BYPR137C-B 5268 nt1.16□□□□□ -2.22
VMA1P17255 DOP1YDR141C 5097 nt1.15□□□□□ -2.23
VMA1P17255 YOR186C-AYOR186C-A 210 nt1.12□□□□□ -2.23
VMA1P17255 tF(GAA)BtF(GAA)B 73 nt1.07□□□□□ -2.24
VMA1P17255 tF(GAA)FtF(GAA)F 73 nt1.07□□□□□ -2.24
VMA1P17255 tF(GAA)GtF(GAA)G 73 nt1.07□□□□□ -2.24
VMA1P17255 tF(GAA)H1tF(GAA)H1 73 nt1.07□□□□□ -2.24
VMA1P17255 tF(GAA)H2tF(GAA)H2 73 nt1.07□□□□□ -2.24
VMA1P17255 tF(GAA)MtF(GAA)M 73 nt1.07□□□□□ -2.24
VMA1P17255 tF(GAA)P1tF(GAA)P1 73 nt1.07□□□□□ -2.24
VMA1P17255 tF(GAA)P2tF(GAA)P2 73 nt1.07□□□□□ -2.24
VMA1P17255 EMT1tM(CAU)D 73 nt1.04□□□□□ -2.24
VMA1P17255 EMT5tM(CAU)J1 73 nt1.04□□□□□ -2.24
VMA1P17255 EMT3tM(CAU)J2 73 nt1.04□□□□□ -2.24
VMA1P17255 EMT4tM(CAU)M 73 nt1.04□□□□□ -2.24
VMA1P17255 EMT2tM(CAU)O2 73 nt1.04□□□□□ -2.24
VMA1P17255 ESP1YGR098C 4893 nt1.03□□□□□ -2.24
VMA1P17255 IQG1YPL242C 4488 nt1.02□□□□□ -2.25
VMA1P17255 THO2YNL139C 4794 nt0.95□□□□□ -2.26
VMA1P17255 YJL113WYJL113W 4647 nt0.95□□□□□ -2.26
VMA1P17255 YOL014WYOL014W 375 nt0.94□□□□□ -2.26
VMA1P17255 PAU9YBL108C-A 129 nt0.93□□□□□ -2.26
VMA1P17255 UTP20YBL004W 7482 nt0.89□□□□□ -2.27
VMA1P17255 FMP27YLR454W 7887 nt0.89□□□□□ -2.27
VMA1P17255 tC(GCA)QtC(GCA)Q 76 nt0.89□□□□□ -2.27
VMA1P17255 YPR159C-AYPR159C-A 102 nt0.86□□□□□ -2.27
VMA1P17255 YKL145W-AYKL145W-A 93 nt0.81□□□□□ -2.28
VMA1P17255 RPL41BYDL133C-A 78 nt0.79□□□□□ -2.28
VMA1P17255 YMR272W-AYMR272W-A 114 nt0.79□□□□□ -2.28
VMA1P17255 tT(AGU)BtT(AGU)B 73 nt0.76□□□□□ -2.29
VMA1P17255 tT(AGU)CtT(AGU)C 73 nt0.76□□□□□ -2.29
VMA1P17255 tT(AGU)DtT(AGU)D 73 nt0.76□□□□□ -2.29
VMA1P17255 tT(AGU)HtT(AGU)H 73 nt0.76□□□□□ -2.29
VMA1P17255 tT(AGU)I1tT(AGU)I1 73 nt0.76□□□□□ -2.29
VMA1P17255 tT(AGU)I2tT(AGU)I2 73 nt0.76□□□□□ -2.29
VMA1P17255 tT(AGU)JtT(AGU)J 73 nt0.76□□□□□ -2.29
VMA1P17255 tT(AGU)N1tT(AGU)N1 73 nt0.76□□□□□ -2.29
VMA1P17255 tT(AGU)N2tT(AGU)N2 73 nt0.76□□□□□ -2.29
VMA1P17255 tT(AGU)O1tT(AGU)O1 73 nt0.76□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms