Protein–RNA interactions for Protein: P09547

SWI1, SWI/SNF chromatin-remodeling complex subunit SWI1, yeastyeast

Predictions only

Length 1,314 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SWI1P09547 YOR170WYOR170W 306 nt-0.58□□□□□ -2.5
SWI1P09547 YBR131C-AYBR131C-A 90 nt-0.58□□□□□ -2.5
SWI1P09547 tM(CAU)Q2tM(CAU)Q2 78 nt-0.59□□□□□ -2.5
SWI1P09547 snR161snR161 161 nt-0.59□□□□□ -2.5
SWI1P09547 YEL014CYEL014C 306 nt-0.6□□□□□ -2.5
SWI1P09547 tR(ACG)Q2tR(ACG)Q2 74 nt-0.6□□□□□ -2.5
SWI1P09547 YOL155W-AYOL155W-A 135 nt-0.6□□□□□ -2.5
SWI1P09547 YNL067W-BYNL067W-B 141 nt-0.61□□□□□ -2.51
SWI1P09547 tQ(UUG)QtQ(UUG)Q 76 nt-0.62□□□□□ -2.51
SWI1P09547 YDL007C-AYDL007C-A 258 nt-0.63□□□□□ -2.51
SWI1P09547 tA(UGC)QtA(UGC)Q 76 nt-0.63□□□□□ -2.51
SWI1P09547 YNR077CYNR077C 255 nt-0.63□□□□□ -2.51
SWI1P09547 YGR146C-AYGR146C-A 162 nt-0.64□□□□□ -2.51
SWI1P09547 snR69snR69 101 nt-0.65□□□□□ -2.51
SWI1P09547 YBR223W-AYBR223W-A 120 nt-0.65□□□□□ -2.51
SWI1P09547 YPL152W-AYPL152W-A 99 nt-0.66□□□□□ -2.52
SWI1P09547 snR39BsnR39B 96 nt-0.66□□□□□ -2.52
SWI1P09547 snR33snR33 183 nt-0.67□□□□□ -2.52
SWI1P09547 YNL097C-BYNL097C-B 123 nt-0.68□□□□□ -2.52
SWI1P09547 PAU9YBL108C-A 129 nt-0.68□□□□□ -2.52
SWI1P09547 YER090C-AYER090C-A 90 nt-0.71□□□□□ -2.52
SWI1P09547 PMP2YEL017C-A 132 nt-0.72□□□□□ -2.52
SWI1P09547 RDS3YPR094W 324 nt-0.72□□□□□ -2.52
SWI1P09547 YGL188C-AYGL188C-A 141 nt-0.73□□□□□ -2.53
SWI1P09547 YOR302WYOR302W 78 nt-0.75□□□□□ -2.53
SWI1P09547 YDR524W-CYDR524W-C 90 nt-0.76□□□□□ -2.53
SWI1P09547 YOR329W-AYOR329W-A 210 nt-0.76□□□□□ -2.53
SWI1P09547 snR48snR48 113 nt-0.82□□□□□ -2.54
SWI1P09547 YNL266WYNL266W 420 nt-0.83□□□□□ -2.54
SWI1P09547 YOR231C-AYOR231C-A 201 nt-0.83□□□□□ -2.54
SWI1P09547 YLR342W-AYLR342W-A 174 nt-0.84□□□□□ -2.54
SWI1P09547 snR50snR50 90 nt-0.84□□□□□ -2.54
SWI1P09547 tD(GUC)QtD(GUC)Q 75 nt-0.86□□□□□ -2.55
SWI1P09547 YNL205CYNL205C 423 nt-0.86□□□□□ -2.55
SWI1P09547 snR52snR52 92 nt-0.89□□□□□ -2.55
SWI1P09547 JLP2YMR132C 627 nt-0.91□□□□□ -2.56
SWI1P09547 YOR102WYOR102W 351 nt-0.91□□□□□ -2.56
SWI1P09547 YLR286W-AYLR286W-A 135 nt-0.92□□□□□ -2.56
SWI1P09547 snR67snR67 82 nt-0.93□□□□□ -2.56
SWI1P09547 YDL159C-BYDL159C-B 177 nt-0.97□□□□□ -2.57
SWI1P09547 tL(UAA)QtL(UAA)Q 85 nt-0.98□□□□□ -2.57
SWI1P09547 YBR178WYBR178W 375 nt-0.98□□□□□ -2.57
SWI1P09547 snR80snR80 171 nt-0.99□□□□□ -2.57
SWI1P09547 YHL015W-AYHL015W-A 84 nt-1□□□□□ -2.57
SWI1P09547 YDR406W-AYDR406W-A 246 nt-1.08□□□□□ -2.58
SWI1P09547 tP(UGG)QtP(UGG)Q 72 nt-1.08□□□□□ -2.58
SWI1P09547 SKI7YOR076C 2244 nt-1.1□□□□□ -2.59
SWI1P09547 YLR299C-AYLR299C-A 93 nt-1.12□□□□□ -2.59
SWI1P09547 YBR196C-AYBR196C-A 150 nt-1.14□□□□□ -2.59
SWI1P09547 YNL198CYNL198C 303 nt-1.17□□□□□ -2.6
SWI1P09547 YML054C-AYML054C-A 159 nt-1.23□□□□□ -2.61
SWI1P09547 YMR046W-AYMR046W-A 129 nt-1.26□□□□□ -2.61
SWI1P09547 Q0142Q0142 177 nt-1.28□□□□□ -2.61
SWI1P09547 tY(GUA)QtY(GUA)Q 84 nt-1.29□□□□□ -2.62
SWI1P09547 SOM1YEL059C-A 225 nt-1.3□□□□□ -2.62
SWI1P09547 YJL150WYJL150W 303 nt-1.3□□□□□ -2.62
SWI1P09547 YCR095W-AYCR095W-A 159 nt-1.32□□□□□ -2.62
SWI1P09547 CDC65tQ(CUG)M 72 nt-1.37□□□□□ -2.63
SWI1P09547 YHR180C-BYHR180C-B 105 nt-1.37□□□□□ -2.63
SWI1P09547 snR77snR77 88 nt-1.4□□□□□ -2.63
SWI1P09547 YGR240C-AYGR240C-A 201 nt-1.41□□□□□ -2.64
SWI1P09547 YBL053WYBL053W 375 nt-1.42□□□□□ -2.64
SWI1P09547 YBR126W-BYBR126W-B 144 nt-1.42□□□□□ -2.64
SWI1P09547 SPG3YDR504C 384 nt-1.43□□□□□ -2.64
SWI1P09547 tM(CAU)Q1tM(CAU)Q1 76 nt-1.47□□□□□ -2.65
SWI1P09547 YOL166W-AYOL166W-A 156 nt-1.5□□□□□ -2.65
SWI1P09547 YOR376W-AYOR376W-A 156 nt-1.51□□□□□ -2.65
SWI1P09547 YDR543CYDR543C 300 nt-1.52□□□□□ -2.65
SWI1P09547 snR81snR81 201 nt-1.56□□□□□ -2.66
SWI1P09547 YMR315W-AYMR315W-A 108 nt-1.59□□□□□ -2.66
SWI1P09547 YOR316C-AYOR316C-A 210 nt-1.61□□□□□ -2.67
SWI1P09547 YKL106C-AYKL106C-A 120 nt-1.62□□□□□ -2.67
SWI1P09547 YGR151CYGR151C 336 nt-1.64□□□□□ -2.67
SWI1P09547 YBR296C-AYBR296C-A 120 nt-1.64□□□□□ -2.67
SWI1P09547 RPL41AYDL184C 78 nt-1.65□□□□□ -2.67
SWI1P09547 YLR466C-BYLR466C-B 117 nt-1.67□□□□□ -2.68
SWI1P09547 YBR109W-AYBR109W-A 225 nt-1.69□□□□□ -2.68
SWI1P09547 YOL083C-AYOL083C-A 141 nt-1.71□□□□□ -2.68
SWI1P09547 YBL071C-BYBL071C-B 99 nt-1.74□□□□□ -2.69
SWI1P09547 YCL001W-BYCL001W-B 255 nt-1.74□□□□□ -2.69
SWI1P09547 YOL164W-AYOL164W-A 183 nt-1.76□□□□□ -2.69
SWI1P09547 YAL037C-AYAL037C-A 93 nt-1.78□□□□□ -2.69
SWI1P09547 YOR309CYOR309C 381 nt-1.78□□□□□ -2.69
SWI1P09547 YNL338WYNL338W 159 nt-1.84□□□□□ -2.7
SWI1P09547 snR38snR38 95 nt-1.84□□□□□ -2.7
SWI1P09547 YBL100W-CYBL100W-C 120 nt-1.85□□□□□ -2.71
SWI1P09547 snR47snR47 99 nt-1.91□□□□□ -2.71
SWI1P09547 YNL337WYNL337W 255 nt-1.96□□□□□ -2.72
SWI1P09547 Q0032Q0032 291 nt-2.02□□□□□ -2.73
SWI1P09547 snR6snR6 112 nt-2.11□□□□□ -2.75
SWI1P09547 YKL225WYKL225W 348 nt-2.14□□□□□ -2.75
SWI1P09547 YGL007C-AYGL007C-A 87 nt-2.16□□□□□ -2.75
SWI1P09547 tS(GCU)Q1tS(GCU)Q1 86 nt-2.19□□□□□ -2.76
SWI1P09547 snR61snR61 90 nt-2.26□□□□□ -2.77
SWI1P09547 YGL041C-BYGL041C-B 183 nt-2.26□□□□□ -2.77
SWI1P09547 snR73snR73 106 nt-2.27□□□□□ -2.77
SWI1P09547 RPL41BYDL133C-A 78 nt-2.27□□□□□ -2.77
SWI1P09547 YJR162CYJR162C 351 nt-2.27□□□□□ -2.77
SWI1P09547 YOR335W-AYOR335W-A 81 nt-2.28□□□□□ -2.77
SWI1P09547 YDL114W-AYDL114W-A 114 nt-2.29□□□□□ -2.78
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms