Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
CYP46A1Q9Y6A2 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC30.76■■■□□ 2.51
CYP46A1Q9Y6A2 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
CYP46A1Q9Y6A2 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CYP46A1Q9Y6A2 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CYP46A1Q9Y6A2 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
CYP46A1Q9Y6A2 AC142086.6-201ENST00000621154 1765 ntBASIC30.74■■■□□ 2.51
CYP46A1Q9Y6A2 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
CYP46A1Q9Y6A2 DRD5P2-201ENST00000421395 2012 ntBASIC30.74■■■□□ 2.51
CYP46A1Q9Y6A2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC30.74■■■□□ 2.51
CYP46A1Q9Y6A2 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC30.74■■■□□ 2.51
CYP46A1Q9Y6A2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
CYP46A1Q9Y6A2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC30.74■■■□□ 2.51
CYP46A1Q9Y6A2 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC30.74■■■□□ 2.51
CYP46A1Q9Y6A2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC30.73■■■□□ 2.51
CYP46A1Q9Y6A2 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.73■■■□□ 2.51
CYP46A1Q9Y6A2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC30.72■■■□□ 2.51
CYP46A1Q9Y6A2 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
CYP46A1Q9Y6A2 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
CYP46A1Q9Y6A2 AP004833.2-201ENST00000532228 1454 ntBASIC30.71■■■□□ 2.51
CYP46A1Q9Y6A2 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.71■■■□□ 2.51
CYP46A1Q9Y6A2 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CYP46A1Q9Y6A2 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51
CYP46A1Q9Y6A2 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC30.7■■■□□ 2.51
CYP46A1Q9Y6A2 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.51
CYP46A1Q9Y6A2 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
CYP46A1Q9Y6A2 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
CYP46A1Q9Y6A2 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.69■■■□□ 2.5
CYP46A1Q9Y6A2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
CYP46A1Q9Y6A2 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CYP46A1Q9Y6A2 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
CYP46A1Q9Y6A2 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CYP46A1Q9Y6A2 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
CYP46A1Q9Y6A2 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC30.67■■■□□ 2.5
CYP46A1Q9Y6A2 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CYP46A1Q9Y6A2 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC30.66■■■□□ 2.5
CYP46A1Q9Y6A2 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.66■■■□□ 2.5
CYP46A1Q9Y6A2 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
CYP46A1Q9Y6A2 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CYP46A1Q9Y6A2 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CYP46A1Q9Y6A2 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CYP46A1Q9Y6A2 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CYP46A1Q9Y6A2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC30.63■■■□□ 2.49
CYP46A1Q9Y6A2 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC30.63■■■□□ 2.49
CYP46A1Q9Y6A2 DUX4L28-201ENST00000623687 678 ntBASIC30.63■■■□□ 2.49
CYP46A1Q9Y6A2 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CYP46A1Q9Y6A2 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC30.62■■■□□ 2.49
CYP46A1Q9Y6A2 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.62■■■□□ 2.49
CYP46A1Q9Y6A2 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.62■■■□□ 2.49
CYP46A1Q9Y6A2 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC30.62■■■□□ 2.49
CYP46A1Q9Y6A2 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC30.62■■■□□ 2.49
CYP46A1Q9Y6A2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC30.61■■■□□ 2.49
CYP46A1Q9Y6A2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CYP46A1Q9Y6A2 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CYP46A1Q9Y6A2 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CYP46A1Q9Y6A2 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.61■■■□□ 2.49
CYP46A1Q9Y6A2 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
CYP46A1Q9Y6A2 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CYP46A1Q9Y6A2 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
CYP46A1Q9Y6A2 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
CYP46A1Q9Y6A2 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
CYP46A1Q9Y6A2 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CYP46A1Q9Y6A2 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
CYP46A1Q9Y6A2 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CYP46A1Q9Y6A2 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC30.58■■■□□ 2.49
CYP46A1Q9Y6A2 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CYP46A1Q9Y6A2 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC30.58■■■□□ 2.49
CYP46A1Q9Y6A2 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.58■■■□□ 2.49
CYP46A1Q9Y6A2 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.58■■■□□ 2.49
CYP46A1Q9Y6A2 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC30.58■■■□□ 2.49
CYP46A1Q9Y6A2 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.57■■■□□ 2.48
CYP46A1Q9Y6A2 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CYP46A1Q9Y6A2 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC30.56■■■□□ 2.48
CYP46A1Q9Y6A2 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
CYP46A1Q9Y6A2 MIR3665-201ENST00000578708 105 ntBASIC30.56■■■□□ 2.48
CYP46A1Q9Y6A2 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC30.55■■■□□ 2.48
CYP46A1Q9Y6A2 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CYP46A1Q9Y6A2 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CYP46A1Q9Y6A2 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CYP46A1Q9Y6A2 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
CYP46A1Q9Y6A2 AC108673.1-201ENST00000510422 1159 ntBASIC30.54■■■□□ 2.48
CYP46A1Q9Y6A2 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.54■■■□□ 2.48
CYP46A1Q9Y6A2 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CYP46A1Q9Y6A2 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CYP46A1Q9Y6A2 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
CYP46A1Q9Y6A2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
CYP46A1Q9Y6A2 AP006261.1-201ENST00000584783 668 ntBASIC30.51■■■□□ 2.47
CYP46A1Q9Y6A2 MIR6090-201ENST00000622481 60 ntBASIC30.51■■■□□ 2.47
CYP46A1Q9Y6A2 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
CYP46A1Q9Y6A2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC30.51■■■□□ 2.47
CYP46A1Q9Y6A2 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC30.5■■■□□ 2.47
CYP46A1Q9Y6A2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC30.5■■■□□ 2.47
CYP46A1Q9Y6A2 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC30.49■■■□□ 2.47
CYP46A1Q9Y6A2 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CYP46A1Q9Y6A2 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CYP46A1Q9Y6A2 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC30.48■■■□□ 2.47
CYP46A1Q9Y6A2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC30.48■■■□□ 2.47
CYP46A1Q9Y6A2 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CYP46A1Q9Y6A2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC30.48■■■□□ 2.47
CYP46A1Q9Y6A2 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms