Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CLIC4Q9Y696 AC142086.6-201ENST00000621154 1765 ntBASIC29.72■■■□□ 2.35
CLIC4Q9Y696 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC29.72■■■□□ 2.35
CLIC4Q9Y696 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC29.72■■■□□ 2.35
CLIC4Q9Y696 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC29.71■■■□□ 2.35
CLIC4Q9Y696 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC29.7■■■□□ 2.35
CLIC4Q9Y696 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
CLIC4Q9Y696 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CLIC4Q9Y696 AC127502.1-201ENST00000399971 1502 ntBASIC29.69■■■□□ 2.34
CLIC4Q9Y696 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
CLIC4Q9Y696 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
CLIC4Q9Y696 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC29.67■■■□□ 2.34
CLIC4Q9Y696 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC29.67■■■□□ 2.34
CLIC4Q9Y696 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC29.67■■■□□ 2.34
CLIC4Q9Y696 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
CLIC4Q9Y696 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC29.67■■■□□ 2.34
CLIC4Q9Y696 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
CLIC4Q9Y696 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC29.66■■■□□ 2.34
CLIC4Q9Y696 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC29.66■■■□□ 2.34
CLIC4Q9Y696 CHML-205ENST00000638160 705 ntTSL 3 BASIC29.66■■■□□ 2.34
CLIC4Q9Y696 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC29.66■■■□□ 2.34
CLIC4Q9Y696 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
CLIC4Q9Y696 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
CLIC4Q9Y696 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC29.65■■■□□ 2.34
CLIC4Q9Y696 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
CLIC4Q9Y696 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC29.65■■■□□ 2.34
CLIC4Q9Y696 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.34
CLIC4Q9Y696 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
CLIC4Q9Y696 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC29.64■■■□□ 2.33
CLIC4Q9Y696 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
CLIC4Q9Y696 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC29.63■■■□□ 2.33
CLIC4Q9Y696 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC29.63■■■□□ 2.33
CLIC4Q9Y696 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
CLIC4Q9Y696 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
CLIC4Q9Y696 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC29.59■■■□□ 2.33
CLIC4Q9Y696 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC29.59■■■□□ 2.33
CLIC4Q9Y696 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC29.59■■■□□ 2.33
CLIC4Q9Y696 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
CLIC4Q9Y696 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC29.58■■■□□ 2.33
CLIC4Q9Y696 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
CLIC4Q9Y696 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
CLIC4Q9Y696 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC29.57■■■□□ 2.32
CLIC4Q9Y696 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC29.56■■■□□ 2.32
CLIC4Q9Y696 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC29.56■■■□□ 2.32
CLIC4Q9Y696 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CLIC4Q9Y696 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC29.56■■■□□ 2.32
CLIC4Q9Y696 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC29.56■■■□□ 2.32
CLIC4Q9Y696 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CLIC4Q9Y696 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
CLIC4Q9Y696 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC29.55■■■□□ 2.32
CLIC4Q9Y696 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CLIC4Q9Y696 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC29.55■■■□□ 2.32
CLIC4Q9Y696 HNRNPLP2-201ENST00000568980 1570 ntBASIC29.55■■■□□ 2.32
CLIC4Q9Y696 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CLIC4Q9Y696 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CLIC4Q9Y696 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CLIC4Q9Y696 AC005559.1-201ENST00000589661 871 ntBASIC29.54■■■□□ 2.32
CLIC4Q9Y696 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC29.54■■■□□ 2.32
CLIC4Q9Y696 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC29.54■■■□□ 2.32
CLIC4Q9Y696 AP004833.2-201ENST00000532228 1454 ntBASIC29.54■■■□□ 2.32
CLIC4Q9Y696 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CLIC4Q9Y696 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
CLIC4Q9Y696 RPS2-209ENST00000529806 993 ntTSL 3 BASIC29.52■■■□□ 2.32
CLIC4Q9Y696 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CLIC4Q9Y696 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC29.51■■■□□ 2.31
CLIC4Q9Y696 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CLIC4Q9Y696 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CLIC4Q9Y696 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC29.49■■■□□ 2.31
CLIC4Q9Y696 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC29.49■■■□□ 2.31
CLIC4Q9Y696 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CLIC4Q9Y696 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC29.47■■■□□ 2.31
CLIC4Q9Y696 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CLIC4Q9Y696 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CLIC4Q9Y696 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
CLIC4Q9Y696 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC29.46■■■□□ 2.31
CLIC4Q9Y696 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
CLIC4Q9Y696 DUX4L28-201ENST00000623687 678 ntBASIC29.45■■■□□ 2.31
CLIC4Q9Y696 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
CLIC4Q9Y696 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC29.44■■■□□ 2.3
CLIC4Q9Y696 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC29.44■■■□□ 2.3
CLIC4Q9Y696 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
CLIC4Q9Y696 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC29.43■■■□□ 2.3
CLIC4Q9Y696 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC29.43■■■□□ 2.3
CLIC4Q9Y696 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CLIC4Q9Y696 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CLIC4Q9Y696 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CLIC4Q9Y696 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC29.43■■■□□ 2.3
CLIC4Q9Y696 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
CLIC4Q9Y696 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC29.42■■■□□ 2.3
CLIC4Q9Y696 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC29.41■■■□□ 2.3
CLIC4Q9Y696 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CLIC4Q9Y696 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC29.41■■■□□ 2.3
CLIC4Q9Y696 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC29.4■■■□□ 2.3
CLIC4Q9Y696 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
CLIC4Q9Y696 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC29.4■■■□□ 2.3
CLIC4Q9Y696 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC29.4■■■□□ 2.3
CLIC4Q9Y696 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
CLIC4Q9Y696 AC100797.4-201ENST00000631653 1827 ntBASIC29.4■■■□□ 2.3
CLIC4Q9Y696 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC29.39■■■□□ 2.3
CLIC4Q9Y696 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC29.39■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms