Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
LEMD3Q9Y2U8 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
LEMD3Q9Y2U8 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
LEMD3Q9Y2U8 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
LEMD3Q9Y2U8 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
LEMD3Q9Y2U8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
LEMD3Q9Y2U8 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
LEMD3Q9Y2U8 ABHD17AP3-201ENST00000503096 1137 ntBASIC32.06■■■□□ 2.72
LEMD3Q9Y2U8 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
LEMD3Q9Y2U8 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
LEMD3Q9Y2U8 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC32.02■■■□□ 2.72
LEMD3Q9Y2U8 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
LEMD3Q9Y2U8 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC32.01■■■□□ 2.72
LEMD3Q9Y2U8 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC32.01■■■□□ 2.72
LEMD3Q9Y2U8 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC32.01■■■□□ 2.71
LEMD3Q9Y2U8 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC32.01■■■□□ 2.71
LEMD3Q9Y2U8 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC32■■■□□ 2.71
LEMD3Q9Y2U8 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
LEMD3Q9Y2U8 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
LEMD3Q9Y2U8 CHST11-202ENST00000546689 756 ntTSL 2 BASIC31.99■■■□□ 2.71
LEMD3Q9Y2U8 BRD4-212ENST00000630599 726 ntTSL 2 BASIC31.99■■■□□ 2.71
LEMD3Q9Y2U8 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
LEMD3Q9Y2U8 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC31.98■■■□□ 2.71
LEMD3Q9Y2U8 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
LEMD3Q9Y2U8 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
LEMD3Q9Y2U8 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC31.97■■■□□ 2.71
LEMD3Q9Y2U8 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC31.96■■■□□ 2.71
LEMD3Q9Y2U8 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC31.96■■■□□ 2.71
LEMD3Q9Y2U8 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
LEMD3Q9Y2U8 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
LEMD3Q9Y2U8 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
LEMD3Q9Y2U8 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
LEMD3Q9Y2U8 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC31.93■■■□□ 2.7
LEMD3Q9Y2U8 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC31.93■■■□□ 2.7
LEMD3Q9Y2U8 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC31.93■■■□□ 2.7
LEMD3Q9Y2U8 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
LEMD3Q9Y2U8 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
LEMD3Q9Y2U8 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
LEMD3Q9Y2U8 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
LEMD3Q9Y2U8 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
LEMD3Q9Y2U8 SRP68-213ENST00000629930 165 ntTSL 5 BASIC31.92■■■□□ 2.7
LEMD3Q9Y2U8 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC31.9■■■□□ 2.7
LEMD3Q9Y2U8 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC31.89■■■□□ 2.7
LEMD3Q9Y2U8 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC31.89■■■□□ 2.7
LEMD3Q9Y2U8 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.89■■■□□ 2.7
LEMD3Q9Y2U8 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
LEMD3Q9Y2U8 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC31.89■■■□□ 2.7
LEMD3Q9Y2U8 AC127502.1-201ENST00000399971 1502 ntBASIC31.89■■■□□ 2.7
LEMD3Q9Y2U8 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC31.88■■■□□ 2.69
LEMD3Q9Y2U8 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
LEMD3Q9Y2U8 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
LEMD3Q9Y2U8 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC31.87■■■□□ 2.69
LEMD3Q9Y2U8 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC31.87■■■□□ 2.69
LEMD3Q9Y2U8 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC31.86■■■□□ 2.69
LEMD3Q9Y2U8 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
LEMD3Q9Y2U8 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
LEMD3Q9Y2U8 AL135925.1-201ENST00000605920 1701 ntBASIC31.86■■■□□ 2.69
LEMD3Q9Y2U8 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
LEMD3Q9Y2U8 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC31.83■■■□□ 2.69
LEMD3Q9Y2U8 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.82■■■□□ 2.68
LEMD3Q9Y2U8 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC31.82■■■□□ 2.68
LEMD3Q9Y2U8 AC135983.2-203ENST00000454486 1613 ntBASIC31.82■■■□□ 2.68
LEMD3Q9Y2U8 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC31.81■■■□□ 2.68
LEMD3Q9Y2U8 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
LEMD3Q9Y2U8 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
LEMD3Q9Y2U8 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
LEMD3Q9Y2U8 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
LEMD3Q9Y2U8 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
LEMD3Q9Y2U8 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
LEMD3Q9Y2U8 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
LEMD3Q9Y2U8 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31.78■■■□□ 2.68
LEMD3Q9Y2U8 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
LEMD3Q9Y2U8 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC31.77■■■□□ 2.68
LEMD3Q9Y2U8 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.68
LEMD3Q9Y2U8 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.76■■■□□ 2.68
LEMD3Q9Y2U8 WHAMMP2-203ENST00000563942 1603 ntBASIC31.76■■■□□ 2.67
LEMD3Q9Y2U8 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC31.76■■■□□ 2.67
LEMD3Q9Y2U8 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
LEMD3Q9Y2U8 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.75■■■□□ 2.67
LEMD3Q9Y2U8 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
LEMD3Q9Y2U8 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
LEMD3Q9Y2U8 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
LEMD3Q9Y2U8 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.74■■■□□ 2.67
LEMD3Q9Y2U8 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC31.74■■■□□ 2.67
LEMD3Q9Y2U8 TPT1-202ENST00000379055 948 ntTSL 2 BASIC31.73■■■□□ 2.67
LEMD3Q9Y2U8 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
LEMD3Q9Y2U8 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
LEMD3Q9Y2U8 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC31.72■■■□□ 2.67
LEMD3Q9Y2U8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC31.72■■■□□ 2.67
LEMD3Q9Y2U8 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC31.71■■■□□ 2.67
LEMD3Q9Y2U8 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC31.71■■■□□ 2.67
LEMD3Q9Y2U8 AC008813.1-201ENST00000536597 885 ntBASIC31.71■■■□□ 2.67
LEMD3Q9Y2U8 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC31.71■■■□□ 2.67
LEMD3Q9Y2U8 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
LEMD3Q9Y2U8 GPX1-201ENST00000419349 1106 ntBASIC31.7■■■□□ 2.67
LEMD3Q9Y2U8 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC31.7■■■□□ 2.67
LEMD3Q9Y2U8 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC31.69■■■□□ 2.66
LEMD3Q9Y2U8 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
LEMD3Q9Y2U8 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC31.69■■■□□ 2.66
LEMD3Q9Y2U8 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC31.68■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms