Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.12■■□□□ 1.61
CUEDC1Q9NWM3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CUEDC1Q9NWM3 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.11■■□□□ 1.61
CUEDC1Q9NWM3 AC127502.1-201ENST00000399971 1502 ntBASIC25.11■■□□□ 1.61
CUEDC1Q9NWM3 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CUEDC1Q9NWM3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.1■■□□□ 1.61
CUEDC1Q9NWM3 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CUEDC1Q9NWM3 BOD1-206ENST00000480951 814 ntTSL 2 BASIC25.1■■□□□ 1.61
CUEDC1Q9NWM3 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
CUEDC1Q9NWM3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.08■■□□□ 1.61
CUEDC1Q9NWM3 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CUEDC1Q9NWM3 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
CUEDC1Q9NWM3 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CUEDC1Q9NWM3 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CUEDC1Q9NWM3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
CUEDC1Q9NWM3 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CUEDC1Q9NWM3 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.07■■□□□ 1.6
CUEDC1Q9NWM3 ABCB10P3-201ENST00000561950 2166 ntBASIC25.07■■□□□ 1.6
CUEDC1Q9NWM3 AC139426.1-201ENST00000568218 2529 ntBASIC25.07■■□□□ 1.6
CUEDC1Q9NWM3 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
CUEDC1Q9NWM3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CUEDC1Q9NWM3 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CUEDC1Q9NWM3 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CUEDC1Q9NWM3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CUEDC1Q9NWM3 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.05■■□□□ 1.6
CUEDC1Q9NWM3 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CUEDC1Q9NWM3 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
CUEDC1Q9NWM3 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CUEDC1Q9NWM3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.03■■□□□ 1.6
CUEDC1Q9NWM3 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.03■■□□□ 1.6
CUEDC1Q9NWM3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC25.02■■□□□ 1.6
CUEDC1Q9NWM3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
CUEDC1Q9NWM3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CUEDC1Q9NWM3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CUEDC1Q9NWM3 AL139393.2-201ENST00000608721 2025 ntBASIC24.99■■□□□ 1.59
CUEDC1Q9NWM3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.99■■□□□ 1.59
CUEDC1Q9NWM3 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CUEDC1Q9NWM3 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
CUEDC1Q9NWM3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.98■■□□□ 1.59
CUEDC1Q9NWM3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
CUEDC1Q9NWM3 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
CUEDC1Q9NWM3 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CUEDC1Q9NWM3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
CUEDC1Q9NWM3 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CUEDC1Q9NWM3 AC021231.2-201ENST00000594613 730 ntBASIC24.97■■□□□ 1.59
CUEDC1Q9NWM3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CUEDC1Q9NWM3 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC24.95■■□□□ 1.59
CUEDC1Q9NWM3 DUX4L29-201ENST00000425409 679 ntBASIC24.95■■□□□ 1.58
CUEDC1Q9NWM3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.95■■□□□ 1.58
CUEDC1Q9NWM3 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.94■■□□□ 1.58
CUEDC1Q9NWM3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
CUEDC1Q9NWM3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC24.94■■□□□ 1.58
CUEDC1Q9NWM3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CUEDC1Q9NWM3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CUEDC1Q9NWM3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CUEDC1Q9NWM3 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CUEDC1Q9NWM3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CUEDC1Q9NWM3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.92■■□□□ 1.58
CUEDC1Q9NWM3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.92■■□□□ 1.58
CUEDC1Q9NWM3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.92■■□□□ 1.58
CUEDC1Q9NWM3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.92■■□□□ 1.58
CUEDC1Q9NWM3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
CUEDC1Q9NWM3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC24.92■■□□□ 1.58
CUEDC1Q9NWM3 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.91■■□□□ 1.58
CUEDC1Q9NWM3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.91■■□□□ 1.58
CUEDC1Q9NWM3 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.91■■□□□ 1.58
CUEDC1Q9NWM3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CUEDC1Q9NWM3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CUEDC1Q9NWM3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
CUEDC1Q9NWM3 ZNRF2P2-203ENST00000454624 420 ntBASIC24.9■■□□□ 1.58
CUEDC1Q9NWM3 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CUEDC1Q9NWM3 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CUEDC1Q9NWM3 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
CUEDC1Q9NWM3 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CUEDC1Q9NWM3 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CUEDC1Q9NWM3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CUEDC1Q9NWM3 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC24.89■■□□□ 1.57
CUEDC1Q9NWM3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.88■■□□□ 1.57
CUEDC1Q9NWM3 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
CUEDC1Q9NWM3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
CUEDC1Q9NWM3 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
CUEDC1Q9NWM3 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
CUEDC1Q9NWM3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CUEDC1Q9NWM3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.88■■□□□ 1.57
CUEDC1Q9NWM3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.87■■□□□ 1.57
CUEDC1Q9NWM3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CUEDC1Q9NWM3 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
CUEDC1Q9NWM3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CUEDC1Q9NWM3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.87■■□□□ 1.57
CUEDC1Q9NWM3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.87■■□□□ 1.57
CUEDC1Q9NWM3 LINC00273-201ENST00000539813 1452 ntBASIC24.86■■□□□ 1.57
CUEDC1Q9NWM3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.86■■□□□ 1.57
CUEDC1Q9NWM3 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.86■■□□□ 1.57
CUEDC1Q9NWM3 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CUEDC1Q9NWM3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CUEDC1Q9NWM3 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.85■■□□□ 1.57
CUEDC1Q9NWM3 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CUEDC1Q9NWM3 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CUEDC1Q9NWM3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.84■■□□□ 1.57
CUEDC1Q9NWM3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms