Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC27.07■■□□□ 1.92
BRD9Q9H8M2 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC27.07■■□□□ 1.92
BRD9Q9H8M2 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
BRD9Q9H8M2 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC27.05■■□□□ 1.92
BRD9Q9H8M2 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC27.05■■□□□ 1.92
BRD9Q9H8M2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
BRD9Q9H8M2 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
BRD9Q9H8M2 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
BRD9Q9H8M2 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
BRD9Q9H8M2 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC27.04■■□□□ 1.92
BRD9Q9H8M2 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
BRD9Q9H8M2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
BRD9Q9H8M2 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
BRD9Q9H8M2 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC27.03■■□□□ 1.92
BRD9Q9H8M2 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC27.03■■□□□ 1.92
BRD9Q9H8M2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC27.03■■□□□ 1.92
BRD9Q9H8M2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC27.03■■□□□ 1.92
BRD9Q9H8M2 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
BRD9Q9H8M2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC27.03■■□□□ 1.92
BRD9Q9H8M2 AL161658.1-201ENST00000623641 1967 ntBASIC27.02■■□□□ 1.92
BRD9Q9H8M2 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
BRD9Q9H8M2 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
BRD9Q9H8M2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC27.02■■□□□ 1.92
BRD9Q9H8M2 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
BRD9Q9H8M2 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
BRD9Q9H8M2 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC27■■□□□ 1.91
BRD9Q9H8M2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC27■■□□□ 1.91
BRD9Q9H8M2 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.99■■□□□ 1.91
BRD9Q9H8M2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.98■■□□□ 1.91
BRD9Q9H8M2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
BRD9Q9H8M2 LINC00273-201ENST00000539813 1452 ntBASIC26.97■■□□□ 1.91
BRD9Q9H8M2 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
BRD9Q9H8M2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
BRD9Q9H8M2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.96■■□□□ 1.91
BRD9Q9H8M2 RARRES2P2-201ENST00000394842 485 ntBASIC26.96■■□□□ 1.91
BRD9Q9H8M2 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
BRD9Q9H8M2 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
BRD9Q9H8M2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.95■■□□□ 1.9
BRD9Q9H8M2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.94■■□□□ 1.9
BRD9Q9H8M2 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.94■■□□□ 1.9
BRD9Q9H8M2 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.94■■□□□ 1.9
BRD9Q9H8M2 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.94■■□□□ 1.9
BRD9Q9H8M2 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
BRD9Q9H8M2 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
BRD9Q9H8M2 GPX1-201ENST00000419349 1106 ntBASIC26.93■■□□□ 1.9
BRD9Q9H8M2 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.92■■□□□ 1.9
BRD9Q9H8M2 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
BRD9Q9H8M2 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
BRD9Q9H8M2 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
BRD9Q9H8M2 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
BRD9Q9H8M2 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
BRD9Q9H8M2 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
BRD9Q9H8M2 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.91■■□□□ 1.9
BRD9Q9H8M2 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
BRD9Q9H8M2 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
BRD9Q9H8M2 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
BRD9Q9H8M2 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
BRD9Q9H8M2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.9■■□□□ 1.9
BRD9Q9H8M2 AC010864.1-201ENST00000609407 1511 ntBASIC26.9■■□□□ 1.9
BRD9Q9H8M2 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
BRD9Q9H8M2 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.89■■□□□ 1.9
BRD9Q9H8M2 ABHD17AP5-201ENST00000580133 923 ntBASIC26.89■■□□□ 1.9
BRD9Q9H8M2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
BRD9Q9H8M2 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.87■■□□□ 1.89
BRD9Q9H8M2 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
BRD9Q9H8M2 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.86■■□□□ 1.89
BRD9Q9H8M2 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
BRD9Q9H8M2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
BRD9Q9H8M2 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.86■■□□□ 1.89
BRD9Q9H8M2 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
BRD9Q9H8M2 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
BRD9Q9H8M2 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
BRD9Q9H8M2 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
BRD9Q9H8M2 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
BRD9Q9H8M2 RNF126P1-201ENST00000567452 1320 ntBASIC26.84■■□□□ 1.89
BRD9Q9H8M2 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
BRD9Q9H8M2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
BRD9Q9H8M2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
BRD9Q9H8M2 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
BRD9Q9H8M2 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
BRD9Q9H8M2 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
BRD9Q9H8M2 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
BRD9Q9H8M2 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
BRD9Q9H8M2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
BRD9Q9H8M2 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.8■■□□□ 1.88
BRD9Q9H8M2 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.8■■□□□ 1.88
BRD9Q9H8M2 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
BRD9Q9H8M2 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
BRD9Q9H8M2 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
BRD9Q9H8M2 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
BRD9Q9H8M2 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
BRD9Q9H8M2 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.78■■□□□ 1.88
BRD9Q9H8M2 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
BRD9Q9H8M2 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
BRD9Q9H8M2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
BRD9Q9H8M2 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.76■■□□□ 1.88
BRD9Q9H8M2 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.76■■□□□ 1.87
BRD9Q9H8M2 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
BRD9Q9H8M2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
BRD9Q9H8M2 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms