Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.09■■□□□ 1.45
CDCP1Q9H5V8 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CDCP1Q9H5V8 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CDCP1Q9H5V8 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC24.08■■□□□ 1.45
CDCP1Q9H5V8 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CDCP1Q9H5V8 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.08■■□□□ 1.45
CDCP1Q9H5V8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.08■■□□□ 1.45
CDCP1Q9H5V8 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CDCP1Q9H5V8 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
CDCP1Q9H5V8 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CDCP1Q9H5V8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.07■■□□□ 1.44
CDCP1Q9H5V8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24.07■■□□□ 1.44
CDCP1Q9H5V8 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CDCP1Q9H5V8 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC24.07■■□□□ 1.44
CDCP1Q9H5V8 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CDCP1Q9H5V8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CDCP1Q9H5V8 MIR3648-2-201ENST00000581792 180 ntBASIC24.06■■□□□ 1.44
CDCP1Q9H5V8 MIR3648-1-201ENST00000615959 180 ntBASIC24.06■■□□□ 1.44
CDCP1Q9H5V8 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CDCP1Q9H5V8 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.06■■□□□ 1.44
CDCP1Q9H5V8 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CDCP1Q9H5V8 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC24.05■■□□□ 1.44
CDCP1Q9H5V8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24.05■■□□□ 1.44
CDCP1Q9H5V8 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC24.05■■□□□ 1.44
CDCP1Q9H5V8 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CDCP1Q9H5V8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.04■■□□□ 1.44
CDCP1Q9H5V8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.04■■□□□ 1.44
CDCP1Q9H5V8 AC016575.1-201ENST00000607026 382 ntBASIC24.04■■□□□ 1.44
CDCP1Q9H5V8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.04■■□□□ 1.44
CDCP1Q9H5V8 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC24.04■■□□□ 1.44
CDCP1Q9H5V8 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CDCP1Q9H5V8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CDCP1Q9H5V8 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.02■■□□□ 1.44
CDCP1Q9H5V8 AC127502.1-201ENST00000399971 1502 ntBASIC24.02■■□□□ 1.44
CDCP1Q9H5V8 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CDCP1Q9H5V8 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
CDCP1Q9H5V8 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CDCP1Q9H5V8 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CDCP1Q9H5V8 LINC00273-201ENST00000539813 1452 ntBASIC24.01■■□□□ 1.43
CDCP1Q9H5V8 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CDCP1Q9H5V8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CDCP1Q9H5V8 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
CDCP1Q9H5V8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CDCP1Q9H5V8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CDCP1Q9H5V8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC24.01■■□□□ 1.43
CDCP1Q9H5V8 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.01■■□□□ 1.43
CDCP1Q9H5V8 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24■■□□□ 1.43
CDCP1Q9H5V8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
CDCP1Q9H5V8 CR559946.2-201ENST00000623684 991 ntBASIC24■■□□□ 1.43
CDCP1Q9H5V8 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CDCP1Q9H5V8 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDCP1Q9H5V8 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDCP1Q9H5V8 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDCP1Q9H5V8 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.99■■□□□ 1.43
CDCP1Q9H5V8 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.99■■□□□ 1.43
CDCP1Q9H5V8 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDCP1Q9H5V8 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC23.98■■□□□ 1.43
CDCP1Q9H5V8 DUX4L13-201ENST00000554103 1267 ntBASIC23.98■■□□□ 1.43
CDCP1Q9H5V8 DUX4L15-201ENST00000611059 1267 ntBASIC23.98■■□□□ 1.43
CDCP1Q9H5V8 DUX4L23-201ENST00000615195 1269 ntBASIC23.98■■□□□ 1.43
CDCP1Q9H5V8 DUX4L24-201ENST00000617576 1269 ntBASIC23.98■■□□□ 1.43
CDCP1Q9H5V8 DUX4L22-201ENST00000618238 1269 ntBASIC23.98■■□□□ 1.43
CDCP1Q9H5V8 DUX4L20-201ENST00000619712 1269 ntBASIC23.98■■□□□ 1.43
CDCP1Q9H5V8 DUX4L21-201ENST00000622058 1269 ntBASIC23.98■■□□□ 1.43
CDCP1Q9H5V8 DUX4L10-201ENST00000622460 1267 ntBASIC23.98■■□□□ 1.43
CDCP1Q9H5V8 DUX4L25-201ENST00000624915 1269 ntBASIC23.98■■□□□ 1.43
CDCP1Q9H5V8 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.98■■□□□ 1.43
CDCP1Q9H5V8 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.98■■□□□ 1.43
CDCP1Q9H5V8 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CDCP1Q9H5V8 MIR639-201ENST00000384974 98 ntBASIC23.97■■□□□ 1.43
CDCP1Q9H5V8 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.97■■□□□ 1.43
CDCP1Q9H5V8 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CDCP1Q9H5V8 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDCP1Q9H5V8 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDCP1Q9H5V8 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.43
CDCP1Q9H5V8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CDCP1Q9H5V8 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CDCP1Q9H5V8 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CDCP1Q9H5V8 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDCP1Q9H5V8 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDCP1Q9H5V8 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDCP1Q9H5V8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
CDCP1Q9H5V8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDCP1Q9H5V8 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
CDCP1Q9H5V8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CDCP1Q9H5V8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDCP1Q9H5V8 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.91■■□□□ 1.42
CDCP1Q9H5V8 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDCP1Q9H5V8 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDCP1Q9H5V8 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.9■■□□□ 1.42
CDCP1Q9H5V8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDCP1Q9H5V8 ST7-AS1-201ENST00000456775 1889 ntBASIC23.9■■□□□ 1.42
CDCP1Q9H5V8 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.89■■□□□ 1.42
CDCP1Q9H5V8 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
CDCP1Q9H5V8 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CDCP1Q9H5V8 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.89■■□□□ 1.41
CDCP1Q9H5V8 MIR4449-201ENST00000578365 66 ntBASIC23.89■■□□□ 1.41
CDCP1Q9H5V8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDCP1Q9H5V8 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDCP1Q9H5V8 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms