Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
KCNF1Q9H3M0 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
KCNF1Q9H3M0 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC28.52■■■□□ 2.16
KCNF1Q9H3M0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
KCNF1Q9H3M0 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
KCNF1Q9H3M0 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
KCNF1Q9H3M0 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.16
KCNF1Q9H3M0 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC28.51■■■□□ 2.15
KCNF1Q9H3M0 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
KCNF1Q9H3M0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
KCNF1Q9H3M0 AL449106.1-201ENST00000608517 1980 ntBASIC28.51■■■□□ 2.15
KCNF1Q9H3M0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC28.51■■■□□ 2.15
KCNF1Q9H3M0 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
KCNF1Q9H3M0 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
KCNF1Q9H3M0 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC28.5■■■□□ 2.15
KCNF1Q9H3M0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
KCNF1Q9H3M0 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
KCNF1Q9H3M0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
KCNF1Q9H3M0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC28.49■■■□□ 2.15
KCNF1Q9H3M0 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC28.49■■■□□ 2.15
KCNF1Q9H3M0 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
KCNF1Q9H3M0 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC28.48■■■□□ 2.15
KCNF1Q9H3M0 PKM-204ENST00000449901 2526 ntTSL 2 BASIC28.47■■■□□ 2.15
KCNF1Q9H3M0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC28.47■■■□□ 2.15
KCNF1Q9H3M0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC28.46■■■□□ 2.15
KCNF1Q9H3M0 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
KCNF1Q9H3M0 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC28.46■■■□□ 2.15
KCNF1Q9H3M0 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
KCNF1Q9H3M0 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC28.46■■■□□ 2.15
KCNF1Q9H3M0 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
KCNF1Q9H3M0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
KCNF1Q9H3M0 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC28.45■■■□□ 2.14
KCNF1Q9H3M0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC28.45■■■□□ 2.14
KCNF1Q9H3M0 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
KCNF1Q9H3M0 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
KCNF1Q9H3M0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC28.43■■■□□ 2.14
KCNF1Q9H3M0 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC28.43■■■□□ 2.14
KCNF1Q9H3M0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
KCNF1Q9H3M0 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC28.42■■■□□ 2.14
KCNF1Q9H3M0 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC28.42■■■□□ 2.14
KCNF1Q9H3M0 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
KCNF1Q9H3M0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC28.41■■■□□ 2.14
KCNF1Q9H3M0 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
KCNF1Q9H3M0 SHF-208ENST00000560734 1731 ntTSL 3 BASIC28.41■■■□□ 2.14
KCNF1Q9H3M0 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC28.41■■■□□ 2.14
KCNF1Q9H3M0 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
KCNF1Q9H3M0 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
KCNF1Q9H3M0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
KCNF1Q9H3M0 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
KCNF1Q9H3M0 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC28.39■■■□□ 2.14
KCNF1Q9H3M0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
KCNF1Q9H3M0 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC28.38■■■□□ 2.13
KCNF1Q9H3M0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
KCNF1Q9H3M0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
KCNF1Q9H3M0 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
KCNF1Q9H3M0 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC28.37■■■□□ 2.13
KCNF1Q9H3M0 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
KCNF1Q9H3M0 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
KCNF1Q9H3M0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
KCNF1Q9H3M0 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC28.36■■■□□ 2.13
KCNF1Q9H3M0 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
KCNF1Q9H3M0 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
KCNF1Q9H3M0 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
KCNF1Q9H3M0 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
KCNF1Q9H3M0 EBPL-203ENST00000378270 579 ntTSL 2 BASIC28.34■■■□□ 2.13
KCNF1Q9H3M0 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
KCNF1Q9H3M0 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC28.34■■■□□ 2.13
KCNF1Q9H3M0 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC28.33■■■□□ 2.12
KCNF1Q9H3M0 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC28.32■■■□□ 2.12
KCNF1Q9H3M0 PROC-203ENST00000409048 1586 ntTSL 5 BASIC28.32■■■□□ 2.12
KCNF1Q9H3M0 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
KCNF1Q9H3M0 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
KCNF1Q9H3M0 AC006077.2-201ENST00000623591 457 ntBASIC28.31■■■□□ 2.12
KCNF1Q9H3M0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
KCNF1Q9H3M0 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
KCNF1Q9H3M0 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC28.29■■■□□ 2.12
KCNF1Q9H3M0 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
KCNF1Q9H3M0 AC010864.1-201ENST00000609407 1511 ntBASIC28.28■■■□□ 2.12
KCNF1Q9H3M0 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC28.28■■■□□ 2.12
KCNF1Q9H3M0 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
KCNF1Q9H3M0 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
KCNF1Q9H3M0 DYNLL1-208ENST00000550178 581 ntBASIC28.27■■■□□ 2.12
KCNF1Q9H3M0 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC28.27■■■□□ 2.12
KCNF1Q9H3M0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
KCNF1Q9H3M0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC28.26■■■□□ 2.11
KCNF1Q9H3M0 LINC01003-201ENST00000564834 1764 ntBASIC28.26■■■□□ 2.11
KCNF1Q9H3M0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
KCNF1Q9H3M0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
KCNF1Q9H3M0 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
KCNF1Q9H3M0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
KCNF1Q9H3M0 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
KCNF1Q9H3M0 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
KCNF1Q9H3M0 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
KCNF1Q9H3M0 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
KCNF1Q9H3M0 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
KCNF1Q9H3M0 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
KCNF1Q9H3M0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
KCNF1Q9H3M0 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
KCNF1Q9H3M0 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
KCNF1Q9H3M0 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms