Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.05■■□□□ 1.76
CLPBQ9H078 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CLPBQ9H078 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CLPBQ9H078 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.04■■□□□ 1.76
CLPBQ9H078 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
CLPBQ9H078 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
CLPBQ9H078 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
CLPBQ9H078 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CLPBQ9H078 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
CLPBQ9H078 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.03■■□□□ 1.76
CLPBQ9H078 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CLPBQ9H078 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.03■■□□□ 1.76
CLPBQ9H078 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
CLPBQ9H078 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CLPBQ9H078 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
CLPBQ9H078 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CLPBQ9H078 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CLPBQ9H078 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CLPBQ9H078 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CLPBQ9H078 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
CLPBQ9H078 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26■■□□□ 1.75
CLPBQ9H078 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26■■□□□ 1.75
CLPBQ9H078 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
CLPBQ9H078 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CLPBQ9H078 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CLPBQ9H078 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
CLPBQ9H078 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.98■■□□□ 1.75
CLPBQ9H078 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
CLPBQ9H078 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
CLPBQ9H078 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CLPBQ9H078 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.97■■□□□ 1.75
CLPBQ9H078 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.97■■□□□ 1.75
CLPBQ9H078 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.97■■□□□ 1.75
CLPBQ9H078 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
CLPBQ9H078 ABCB10P3-201ENST00000561950 2166 ntBASIC25.96■■□□□ 1.75
CLPBQ9H078 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CLPBQ9H078 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
CLPBQ9H078 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
CLPBQ9H078 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CLPBQ9H078 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
CLPBQ9H078 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CLPBQ9H078 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CLPBQ9H078 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
CLPBQ9H078 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
CLPBQ9H078 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
CLPBQ9H078 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.92■■□□□ 1.74
CLPBQ9H078 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.92■■□□□ 1.74
CLPBQ9H078 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.92■■□□□ 1.74
CLPBQ9H078 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CLPBQ9H078 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CLPBQ9H078 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CLPBQ9H078 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CLPBQ9H078 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.91■■□□□ 1.74
CLPBQ9H078 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
CLPBQ9H078 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CLPBQ9H078 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CLPBQ9H078 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CLPBQ9H078 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CLPBQ9H078 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.87■■□□□ 1.73
CLPBQ9H078 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.87■■□□□ 1.73
CLPBQ9H078 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.87■■□□□ 1.73
CLPBQ9H078 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
CLPBQ9H078 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CLPBQ9H078 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.86■■□□□ 1.73
CLPBQ9H078 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CLPBQ9H078 LINC01971-201ENST00000617888 1048 ntBASIC25.85■■□□□ 1.73
CLPBQ9H078 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.84■■□□□ 1.73
CLPBQ9H078 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CLPBQ9H078 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CLPBQ9H078 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.84■■□□□ 1.73
CLPBQ9H078 DUX4L11-201ENST00000611504 1267 ntBASIC25.84■■□□□ 1.73
CLPBQ9H078 DUX4L12-201ENST00000614593 1267 ntBASIC25.84■■□□□ 1.73
CLPBQ9H078 DUX4L14-201ENST00000621227 1267 ntBASIC25.84■■□□□ 1.73
CLPBQ9H078 AC139426.1-201ENST00000568218 2529 ntBASIC25.84■■□□□ 1.73
CLPBQ9H078 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
CLPBQ9H078 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CLPBQ9H078 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
CLPBQ9H078 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CLPBQ9H078 MIR3648-2-201ENST00000581792 180 ntBASIC25.83■■□□□ 1.73
CLPBQ9H078 MIR3648-1-201ENST00000615959 180 ntBASIC25.83■■□□□ 1.73
CLPBQ9H078 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
CLPBQ9H078 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.83■■□□□ 1.73
CLPBQ9H078 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CLPBQ9H078 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
CLPBQ9H078 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
CLPBQ9H078 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CLPBQ9H078 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
CLPBQ9H078 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
CLPBQ9H078 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.81■■□□□ 1.72
CLPBQ9H078 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.81■■□□□ 1.72
CLPBQ9H078 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CLPBQ9H078 MIR639-201ENST00000384974 98 ntBASIC25.8■■□□□ 1.72
CLPBQ9H078 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.8■■□□□ 1.72
CLPBQ9H078 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.8■■□□□ 1.72
CLPBQ9H078 AC016575.1-201ENST00000607026 382 ntBASIC25.8■■□□□ 1.72
CLPBQ9H078 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
CLPBQ9H078 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.78■■□□□ 1.72
CLPBQ9H078 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CLPBQ9H078 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CLPBQ9H078 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms