Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC25.38■■□□□ 1.65
Nkx2-4Q9EQM3 Gm5786-201ENSMUST00000085368 882 ntBASIC25.38■■□□□ 1.65
Nkx2-4Q9EQM3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Nkx2-4Q9EQM3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Nkx2-4Q9EQM3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC25.36■■□□□ 1.65
Nkx2-4Q9EQM3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Nkx2-4Q9EQM3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.36■■□□□ 1.65
Nkx2-4Q9EQM3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Nkx2-4Q9EQM3 Gm11687-201ENSMUST00000118911 886 ntBASIC25.35■■□□□ 1.65
Nkx2-4Q9EQM3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
Nkx2-4Q9EQM3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Nkx2-4Q9EQM3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
Nkx2-4Q9EQM3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC25.34■■□□□ 1.65
Nkx2-4Q9EQM3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Nkx2-4Q9EQM3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC25.33■■□□□ 1.65
Nkx2-4Q9EQM3 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Nkx2-4Q9EQM3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
Nkx2-4Q9EQM3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Nkx2-4Q9EQM3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Nkx2-4Q9EQM3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
Nkx2-4Q9EQM3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Nkx2-4Q9EQM3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Nkx2-4Q9EQM3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Nkx2-4Q9EQM3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
Nkx2-4Q9EQM3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Nkx2-4Q9EQM3 Gm9806-201ENSMUST00000051080 552 ntBASIC25.3■■□□□ 1.64
Nkx2-4Q9EQM3 Gm4799-201ENSMUST00000095396 657 ntBASIC25.3■■□□□ 1.64
Nkx2-4Q9EQM3 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC25.29■■□□□ 1.64
Nkx2-4Q9EQM3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Nkx2-4Q9EQM3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Nkx2-4Q9EQM3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Nkx2-4Q9EQM3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Nkx2-4Q9EQM3 Gm16437-201ENSMUST00000025669 507 ntBASIC25.27■■□□□ 1.64
Nkx2-4Q9EQM3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Nkx2-4Q9EQM3 Gm30023-201ENSMUST00000197970 889 ntBASIC25.25■■□□□ 1.63
Nkx2-4Q9EQM3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Nkx2-4Q9EQM3 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Nkx2-4Q9EQM3 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.22■■□□□ 1.63
Nkx2-4Q9EQM3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
Nkx2-4Q9EQM3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Nkx2-4Q9EQM3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Nkx2-4Q9EQM3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Nkx2-4Q9EQM3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Nkx2-4Q9EQM3 Gm15039-201ENSMUST00000118914 875 ntBASIC25.21■■□□□ 1.63
Nkx2-4Q9EQM3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Nkx2-4Q9EQM3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Nkx2-4Q9EQM3 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Nkx2-4Q9EQM3 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Nkx2-4Q9EQM3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC25.18■■□□□ 1.62
Nkx2-4Q9EQM3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC25.17■■□□□ 1.62
Nkx2-4Q9EQM3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Nkx2-4Q9EQM3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Nkx2-4Q9EQM3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Nkx2-4Q9EQM3 Gm7332-201ENSMUST00000118351 454 ntBASIC25.15■■□□□ 1.62
Nkx2-4Q9EQM3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC25.15■■□□□ 1.62
Nkx2-4Q9EQM3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Nkx2-4Q9EQM3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC25.14■■□□□ 1.62
Nkx2-4Q9EQM3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Nkx2-4Q9EQM3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.13■■□□□ 1.61
Nkx2-4Q9EQM3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC25.13■■□□□ 1.61
Nkx2-4Q9EQM3 Pkd1-207ENSMUST00000228550 1050 ntBASIC25.13■■□□□ 1.61
Nkx2-4Q9EQM3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC25.12■■□□□ 1.61
Nkx2-4Q9EQM3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Nkx2-4Q9EQM3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Nkx2-4Q9EQM3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC25.12■■□□□ 1.61
Nkx2-4Q9EQM3 Gm27502-201ENSMUST00000183495 199 ntBASIC25.12■■□□□ 1.61
Nkx2-4Q9EQM3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Nkx2-4Q9EQM3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Nkx2-4Q9EQM3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
Nkx2-4Q9EQM3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Nkx2-4Q9EQM3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Nkx2-4Q9EQM3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Nkx2-4Q9EQM3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Nkx2-4Q9EQM3 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Nkx2-4Q9EQM3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
Nkx2-4Q9EQM3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Nkx2-4Q9EQM3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Nkx2-4Q9EQM3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Nkx2-4Q9EQM3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Nkx2-4Q9EQM3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Nkx2-4Q9EQM3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Nkx2-4Q9EQM3 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.02■■□□□ 1.6
Nkx2-4Q9EQM3 AC154454.1-201ENSMUST00000225253 216 ntBASIC25.02■■□□□ 1.6
Nkx2-4Q9EQM3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
Nkx2-4Q9EQM3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Nkx2-4Q9EQM3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Nkx2-4Q9EQM3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC25.01■■□□□ 1.59
Nkx2-4Q9EQM3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC25.01■■□□□ 1.59
Nkx2-4Q9EQM3 Pcf11-205ENSMUST00000208255 1720 ntBASIC25■■□□□ 1.59
Nkx2-4Q9EQM3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC25■■□□□ 1.59
Nkx2-4Q9EQM3 Mir3960-201ENSMUST00000198213 73 ntBASIC24.99■■□□□ 1.59
Nkx2-4Q9EQM3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Nkx2-4Q9EQM3 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC24.99■■□□□ 1.59
Nkx2-4Q9EQM3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Nkx2-4Q9EQM3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Nkx2-4Q9EQM3 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Nkx2-4Q9EQM3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Nkx2-4Q9EQM3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Nkx2-4Q9EQM3 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Nkx2-4Q9EQM3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms