Protein–RNA interactions for Protein: Q9D5Q6

Speer4f1, MCG6381, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer4f1Q9D5Q6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Speer4f1Q9D5Q6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
Speer4f1Q9D5Q6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Speer4f1Q9D5Q6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Speer4f1Q9D5Q6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC31.4■■■□□ 2.62
Speer4f1Q9D5Q6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC31.39■■■□□ 2.62
Speer4f1Q9D5Q6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Speer4f1Q9D5Q6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Speer4f1Q9D5Q6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Speer4f1Q9D5Q6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Speer4f1Q9D5Q6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Speer4f1Q9D5Q6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Speer4f1Q9D5Q6 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Speer4f1Q9D5Q6 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC31.33■■■□□ 2.61
Speer4f1Q9D5Q6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
Speer4f1Q9D5Q6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Speer4f1Q9D5Q6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Speer4f1Q9D5Q6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
Speer4f1Q9D5Q6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
Speer4f1Q9D5Q6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Speer4f1Q9D5Q6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Speer4f1Q9D5Q6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Speer4f1Q9D5Q6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
Speer4f1Q9D5Q6 Gm30023-201ENSMUST00000197970 889 ntBASIC31.27■■■□□ 2.6
Speer4f1Q9D5Q6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Speer4f1Q9D5Q6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Speer4f1Q9D5Q6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Speer4f1Q9D5Q6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Speer4f1Q9D5Q6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Speer4f1Q9D5Q6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC31.25■■■□□ 2.59
Speer4f1Q9D5Q6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC31.25■■■□□ 2.59
Speer4f1Q9D5Q6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC31.24■■■□□ 2.59
Speer4f1Q9D5Q6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC31.24■■■□□ 2.59
Speer4f1Q9D5Q6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
Speer4f1Q9D5Q6 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC31.23■■■□□ 2.59
Speer4f1Q9D5Q6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
Speer4f1Q9D5Q6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Speer4f1Q9D5Q6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Speer4f1Q9D5Q6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC31.2■■■□□ 2.59
Speer4f1Q9D5Q6 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Speer4f1Q9D5Q6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Speer4f1Q9D5Q6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
Speer4f1Q9D5Q6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC31.17■■■□□ 2.58
Speer4f1Q9D5Q6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
Speer4f1Q9D5Q6 Gm42809-201ENSMUST00000198429 1138 ntBASIC31.17■■■□□ 2.58
Speer4f1Q9D5Q6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Speer4f1Q9D5Q6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Speer4f1Q9D5Q6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC31.16■■■□□ 2.58
Speer4f1Q9D5Q6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC31.15■■■□□ 2.58
Speer4f1Q9D5Q6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC31.15■■■□□ 2.58
Speer4f1Q9D5Q6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC31.14■■■□□ 2.58
Speer4f1Q9D5Q6 Nkain2-201ENSMUST00000092602 558 ntBASIC31.14■■■□□ 2.58
Speer4f1Q9D5Q6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
Speer4f1Q9D5Q6 Gm9939-201ENSMUST00000067161 1154 ntBASIC31.13■■■□□ 2.57
Speer4f1Q9D5Q6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Speer4f1Q9D5Q6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Speer4f1Q9D5Q6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC31.12■■■□□ 2.57
Speer4f1Q9D5Q6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC31.12■■■□□ 2.57
Speer4f1Q9D5Q6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Speer4f1Q9D5Q6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Speer4f1Q9D5Q6 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Speer4f1Q9D5Q6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Speer4f1Q9D5Q6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC31.11■■■□□ 2.57
Speer4f1Q9D5Q6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC31.11■■■□□ 2.57
Speer4f1Q9D5Q6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Speer4f1Q9D5Q6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Speer4f1Q9D5Q6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC31.1■■■□□ 2.57
Speer4f1Q9D5Q6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Speer4f1Q9D5Q6 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Speer4f1Q9D5Q6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Speer4f1Q9D5Q6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC31.08■■■□□ 2.57
Speer4f1Q9D5Q6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC31.08■■■□□ 2.57
Speer4f1Q9D5Q6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC31.06■■■□□ 2.56
Speer4f1Q9D5Q6 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Speer4f1Q9D5Q6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Speer4f1Q9D5Q6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Speer4f1Q9D5Q6 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Speer4f1Q9D5Q6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Speer4f1Q9D5Q6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
Speer4f1Q9D5Q6 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC31.03■■■□□ 2.56
Speer4f1Q9D5Q6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC31.03■■■□□ 2.56
Speer4f1Q9D5Q6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Speer4f1Q9D5Q6 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Speer4f1Q9D5Q6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC31.01■■■□□ 2.55
Speer4f1Q9D5Q6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC31■■■□□ 2.55
Speer4f1Q9D5Q6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Speer4f1Q9D5Q6 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Speer4f1Q9D5Q6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Speer4f1Q9D5Q6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Speer4f1Q9D5Q6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
Speer4f1Q9D5Q6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Speer4f1Q9D5Q6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC30.97■■■□□ 2.55
Speer4f1Q9D5Q6 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Speer4f1Q9D5Q6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC30.96■■■□□ 2.55
Speer4f1Q9D5Q6 Gm6821-201ENSMUST00000107540 542 ntBASIC30.96■■■□□ 2.55
Speer4f1Q9D5Q6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Speer4f1Q9D5Q6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
Speer4f1Q9D5Q6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC30.95■■■□□ 2.55
Speer4f1Q9D5Q6 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC30.94■■■□□ 2.54
Speer4f1Q9D5Q6 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms