Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Zfp131-205ENSMUST00000223812 663 ntBASIC25.54■■□□□ 1.68
Ssr1Q9CY50 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ssr1Q9CY50 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.53■■□□□ 1.68
Ssr1Q9CY50 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ssr1Q9CY50 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ssr1Q9CY50 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ssr1Q9CY50 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC25.52■■□□□ 1.68
Ssr1Q9CY50 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
Ssr1Q9CY50 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ssr1Q9CY50 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC25.52■■□□□ 1.68
Ssr1Q9CY50 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ssr1Q9CY50 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Ssr1Q9CY50 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
Ssr1Q9CY50 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Ssr1Q9CY50 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ssr1Q9CY50 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
Ssr1Q9CY50 Gm20634-201ENSMUST00000090779 2956 ntBASIC25.49■■□□□ 1.67
Ssr1Q9CY50 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC25.49■■□□□ 1.67
Ssr1Q9CY50 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25.49■■□□□ 1.67
Ssr1Q9CY50 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ssr1Q9CY50 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.48■■□□□ 1.67
Ssr1Q9CY50 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Ssr1Q9CY50 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
Ssr1Q9CY50 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Ssr1Q9CY50 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
Ssr1Q9CY50 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Ssr1Q9CY50 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Ssr1Q9CY50 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
Ssr1Q9CY50 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Ssr1Q9CY50 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
Ssr1Q9CY50 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
Ssr1Q9CY50 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Ssr1Q9CY50 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.66
Ssr1Q9CY50 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Ssr1Q9CY50 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Ssr1Q9CY50 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.44■■□□□ 1.66
Ssr1Q9CY50 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.44■■□□□ 1.66
Ssr1Q9CY50 AC153890.1-201ENSMUST00000220021 2469 ntBASIC25.43■■□□□ 1.66
Ssr1Q9CY50 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ssr1Q9CY50 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
Ssr1Q9CY50 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.43■■□□□ 1.66
Ssr1Q9CY50 AC157572.2-201ENSMUST00000226970 908 ntBASIC25.43■■□□□ 1.66
Ssr1Q9CY50 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Ssr1Q9CY50 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC25.42■■□□□ 1.66
Ssr1Q9CY50 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ssr1Q9CY50 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ssr1Q9CY50 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ssr1Q9CY50 Gm9397-201ENSMUST00000200125 605 ntBASIC25.41■■□□□ 1.66
Ssr1Q9CY50 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC25.41■■□□□ 1.66
Ssr1Q9CY50 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ssr1Q9CY50 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
Ssr1Q9CY50 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Ssr1Q9CY50 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC25.39■■□□□ 1.66
Ssr1Q9CY50 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC25.39■■□□□ 1.65
Ssr1Q9CY50 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC25.38■■□□□ 1.65
Ssr1Q9CY50 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ssr1Q9CY50 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
Ssr1Q9CY50 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ssr1Q9CY50 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ssr1Q9CY50 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Ssr1Q9CY50 Gm45855-201ENSMUST00000212546 880 ntBASIC25.34■■□□□ 1.65
Ssr1Q9CY50 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ssr1Q9CY50 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Ssr1Q9CY50 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ssr1Q9CY50 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
Ssr1Q9CY50 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ssr1Q9CY50 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC25.32■■□□□ 1.64
Ssr1Q9CY50 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ssr1Q9CY50 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ssr1Q9CY50 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ssr1Q9CY50 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Ssr1Q9CY50 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ssr1Q9CY50 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.31■■□□□ 1.64
Ssr1Q9CY50 Gm24970-201ENSMUST00000175582 82 ntBASIC25.31■■□□□ 1.64
Ssr1Q9CY50 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ssr1Q9CY50 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
Ssr1Q9CY50 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ssr1Q9CY50 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ssr1Q9CY50 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ssr1Q9CY50 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ssr1Q9CY50 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ssr1Q9CY50 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Ssr1Q9CY50 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC25.27■■□□□ 1.64
Ssr1Q9CY50 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
Ssr1Q9CY50 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ssr1Q9CY50 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC25.26■■□□□ 1.63
Ssr1Q9CY50 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ssr1Q9CY50 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
Ssr1Q9CY50 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC25.25■■□□□ 1.63
Ssr1Q9CY50 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
Ssr1Q9CY50 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
Ssr1Q9CY50 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25.24■■□□□ 1.63
Ssr1Q9CY50 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Ssr1Q9CY50 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ssr1Q9CY50 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ssr1Q9CY50 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ssr1Q9CY50 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ssr1Q9CY50 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
Ssr1Q9CY50 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Ssr1Q9CY50 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms